EY728455

Overview
NameEY728455
Unique NameEY728455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: CATB_PSEPU (Muconate cycloisomerase 1 OS=Pseudomonas putida GN=catB PE=1 SV=4)

HSP 1 Score: 279.256 bits (713), Expect = 1.643e-74
Identity = 143/186 (76.88%), Postives = 156/186 (83.87%), Query Frame = -3
Query:   61 KSLGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRR 618
            + LGD ASVRVDV Q  DE+ A+RAC+VLGDNGIDLIEQPISR NR G  RLN  SPAPIMADESIE VEDAF+LA +GAAS+FALKIAKNGGPRAVLRTA IAEAAGI LYGGTMLEG IGTLASAHAFLTL +L W TELFGPLLLTE+I+ EP  YRDF LH+   PGLGL +DE+RLA F R
Sbjct:  189 RELGDSASVRVDVNQYWDESQAIRACQVLGDNGIDLIEQPISRINRSGQVRLNQRSPAPIMADESIESVEDAFSLAADGAASIFALKIAKNGGPRAVLRTAQIAEAAGIALYGGTMLEGSIGTLASAHAFLTLRQLTWGTELFGPLLLTEEIVNEPPQYRDFQLHIPRTPGLGLTLDEQRLARFAR 374          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: CATB2_ACILW (Muconate cycloisomerase 1-2 OS=Acinetobacter lwoffii GN=catB2 PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 7.193e-46
Identity = 100/187 (53.48%), Postives = 123/187 (65.78%), Query Frame = -3
Query:   58 KSLGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRRD 618
            K+L  R  VRVDV QA  E+ A+ A K   D  + LIEQPI+  NR G+ RL   +  PIMADE++    DAF LA   AA VFA+KIA++GG       AAIA AA I LYGGTMLEG +GT+ASA  F T  +L W TELFGPLLLTE+IL EPL Y +F LH+   PGLG+ +D +++   RRD
Sbjct:  189 KALQGRGEVRVDVNQAWTESEAIWAGKRFADASVALIEQPIAAENRAGLKRLTDLAQVPIMADEALHGPADAFALASARAADVFAVKIAQSGGLSGAANVAAIALAANIDLYGGTMLEGAVGTIASAQLFSTFGELKWGTELFGPLLLTEEILTEPLRYENFVLHLPQGPGLGITLDWDKIDRLRRD 375          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: CATB1_ACILW (Muconate cycloisomerase 1-1 OS=Acinetobacter lwoffii GN=catB1 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.558e-43
Identity = 93/185 (50.27%), Postives = 122/185 (65.95%), Query Frame = -3
Query:   58 LGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRRD 612
            +G+ A+VRVDV  A  E  A  A   L D G +L+EQP++  +   +ARL    P  +MADE ++  ++AF +AR   A VFA+KI ++GG  A  R AAIA+AAGI LYGGTMLEG   T+ASAH F +   L W TELFGPLL+TE+IL +PL Y D+ L V   PGLG+ +DEE++  F RD
Sbjct:  189 VGEHAAVRVDVNMAWSETQAAWAIPALADAGCELVEQPVA--SAAALARLMRRFPVALMADEILQGPDNAFEIARVNGADVFAIKIEQSGGLFAAQRVAAIADAAGIELYGGTMLEGAFSTVASAHLFASFANLQWGTELFGPLLITEEILTKPLDYSDYQLTVPDGPGLGIELDEEKVRRFTRD 371          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: CATB_ACIAD (Muconate cycloisomerase 1 OS=Acinetobacter sp. (strain ADP1) GN=catB PE=3 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.834e-41
Identity = 90/186 (48.39%), Postives = 117/186 (62.90%), Query Frame = -3
Query:   61 KSLGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRR 618
            K+LG   SVRVDV +A  E   ++  + L D GIDLIEQP +  N   +ARL       IMADE +   + A+ +A++  A VFA+K+ ++GG       A IA  AGI LYGGTMLEG +G++ASAHAF T   L + TELFGPLLLT+ IL  PL Y +F L V   PGLG+ +DE++L   RR
Sbjct:  184 KALGPEISVRVDVNRAWSELECVKGIQQLQDGGIDLIEQPCAIENTDALARLTARFDVAIMADEVLTGPDSAYRIAKKSGADVFAVKVEQSGGLIEACEVAKIARLAGISLYGGTMLEGPVGSIASAHAFSTFETLEFGTELFGPLLLTQSILKTPLQYENFELVVPNTPGLGIEVDEDKLEQLRR 369          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: TFDD_DELAC (Chloromuconate cycloisomerase OS=Delftia acidovorans GN=tfdD PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.319e-36
Identity = 78/186 (41.94%), Postives = 114/186 (61.29%), Query Frame = -3
Query:   61 KSLGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRR 618
            K++GD+ASVRVDV Q  DE  A      L + G++L+EQP+ R N G + RL   +   I+ADES+  +  AF LAR+ A   F+LK+   GG    L+ AAIAEAAGI  YGGTML+  +GT A+ H + TL  L +  EL GP +L++ +  + L  +DF +H+    GLG+ +D +++  + R
Sbjct:  183 KAVGDKASVRVDVNQGWDEQTASIWIPRLEEAGVELVEQPVPRANFGALRRLTEQNGVAILADESLSSLSSAFELARDRAVDAFSLKLCNMGGIANTLKVAAIAEAAGISSYGGTMLDSTVGTAAALHVYATLPSLPYGCELIGPWVLSDRLTQQDLEIKDFEVHLPVGSGLGVDLDHDKVRHYTR 368          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: CBNB_RALEU (Chloromuconate cycloisomerase cbnB OS=Ralstonia eutropha GN=cbnB PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.319e-36
Identity = 78/186 (41.94%), Postives = 114/186 (61.29%), Query Frame = -3
Query:   61 KSLGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRR 618
            K++GD+ASVRVDV Q  DE  A      L + G++L+EQP+ R N G + RL   +   I+ADES+  +  AF LAR+ A   F+LK+   GG    L+ AAIAEAAGI  YGGTML+  +GT A+ H + TL  L +  EL GP +L++ +  + L  +DF +H+    GLG+ +D +++  + R
Sbjct:  183 KAVGDKASVRVDVNQGWDEQTASIWIPRLEEAGVELVEQPVPRANFGALRRLTEQNGVAILADESLSSLSSAFELARDRAVDAFSLKLCNMGGIANTLKVAAIAEAAGISSYGGTMLDSTVGTAAALHVYATLPSLPYGCELIGPWVLSDRLTQQDLEIKDFEVHLPVGSGLGVDLDHDKVRHYTR 368          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: TCBD_PSESQ (Chloromuconate cycloisomerase OS=Pseudomonas sp. (strain P51) GN=tcbD PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.956e-36
Identity = 78/186 (41.94%), Postives = 113/186 (60.75%), Query Frame = -3
Query:   61 KSLGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRR 618
            K++GDRASVRVDV Q  DE  A      L + G++L+EQP+ R N G + RL   +   I+ADES+  +  AF LAR+ A   F+LK+   GG    L+ AA+AEAAGI  YGGTML+  +GT A+ H + TL  L +  EL GP +L + +  + L  +DF +H+    GLG+ +D +++  + R
Sbjct:  183 KAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVEQPVPRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDSTVGTAAALHVYATLPSLPYGCELIGPWVLGDRLTQQDLEIKDFEVHLPLGSGLGVDLDHDKVRHYTR 368          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: CLCB_PSEPU (Chloromuconate cycloisomerase OS=Pseudomonas putida GN=clcB PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35
Identity = 77/184 (41.85%), Postives = 112/184 (60.87%), Query Frame = -3
Query:   61 LGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRR 612
            +GDRA+VRVD+ QA DE  A      L   G++L+EQP++R+N   + RL+  +   I+ADES+  +  AF LAR      F+LK+   GG    L+ AAIAEA+GI  YGGTML+  IGT A+ H + TL  + ++ EL GP +L + +    L  +DF + + + PGLG+ ID ++L  F R
Sbjct:  185 VGDRAAVRVDINQAWDENTASVWIPRLEAAGVELVEQPVARSNFDALRRLSADNGVAILADESLSSLASAFELARHHCVDAFSLKLCNMGGVANTLKVAAIAEASGIASYGGTMLDSSIGTAAALHVYATLPTMPFECELLGPWVLADTLTQTQLEIKDFEIRLPSGPGLGVDIDPDKLRHFTR 368          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: TFDD1_RALEJ (Chloromuconate cycloisomerase OS=Ralstonia eutropha (strain JMP134) GN=tfdDI PE=1 SV=4)

HSP 1 Score: 147.902 bits (372), Expect = 5.713e-35
Identity = 80/187 (42.78%), Postives = 114/187 (60.96%), Query Frame = -3
Query:   61 SKSLGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRR 621
            S SLG +A +RVDV QA DE VA      L   G++LIEQP+ R N   + RL+ ++   IMADES+  +  AF+LAR+ +  VF+LK+   GG  A  + AA+AEA+GI  YGGTML+  IGT  +   + T+  L +  EL GP +L + +  EPL  RD+ L V T  G G+ +DE+++  + R
Sbjct:  182 SNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDSTIGTSVALQLYSTVPSLPFGCELIGPFVLADTLSHEPLEIRDYELQVPTGVGHGMTLDEDKVRQYAR 368          
BLAST of EY728455 vs. ExPASy Swiss-Prot
Match: CATB_RHOOP (Muconate cycloisomerase 1 OS=Rhodococcus opacus GN=catB PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.466e-32
Identity = 81/208 (38.94%), Postives = 118/208 (56.73%), Query Frame = -3
Query:   58 F*IKIVPVNPA-RTGFTSSPSKSLGDRASVRVDVKQAGDEAVALRACKVLGDNGIDLIEQPISRNNRGGMARLNLSSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRAVLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTLNKLAWDTELFGPLLLTEDILAEPLVYRDFHLHVSTAPGLGLAIDEERLAFFRRD 678
            F +K+  ++PA  T      +++L  +A VR+DV    D   AL+    L + G++LIEQP        +A LN   P P+MADES++   DA  +AR GAA V ALK  K GG +      AIA+AAGI  +G T +EG IGT AS H       + + TELFGPLL +E++L EP+ Y D  + +   PGLG+ ++ + +  + R+
Sbjct:  166 FKLKMGALDPAVDTARVVQIAQALQGKAGVRIDVNARWDRLTALKYVPRLVEGGVELIEQPTPGEQLEVLAELNRLVPVPVMADESVQTPHDALEVARRGAADVIALKTTKCGGLQKSREVVAIAKAAGIACHGATSIEGPIGTAASIHFACAEPGIDFGTELFGPLLFSEELLQEPIRYADGQVFLPEGPGLGVELNMDAVKTWTRN 373          
The following BLAST results are available for this feature:
BLAST of EY728455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CATB_PSEPU1.643e-7476.88Muconate cycloisomerase 1 OS=Pseudomonas putida GN... [more]
CATB2_ACILW7.193e-4653.48Muconate cycloisomerase 1-2 OS=Acinetobacter lwoff... [more]
CATB1_ACILW2.558e-4350.27Muconate cycloisomerase 1-1 OS=Acinetobacter lwoff... [more]
CATB_ACIAD1.834e-4148.39Muconate cycloisomerase 1 OS=Acinetobacter sp. (st... [more]
TFDD_DELAC2.319e-3641.94Chloromuconate cycloisomerase OS=Delftia acidovora... [more]
CBNB_RALEU2.319e-3641.94Chloromuconate cycloisomerase cbnB OS=Ralstonia eu... [more]
TCBD_PSESQ3.956e-3641.94Chloromuconate cycloisomerase OS=Pseudomonas sp. (... [more]
CLCB_PSEPU1.964e-3541.85Chloromuconate cycloisomerase OS=Pseudomonas putid... [more]
TFDD1_RALEJ5.713e-3542.78Chloromuconate cycloisomerase OS=Ralstonia eutroph... [more]
CATB_RHOOP3.466e-3238.94Muconate cycloisomerase 1 OS=Rhodococcus opacus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728455 ID=EY728455; Name=EY728455; organism=Citrus sinensis; type=EST; length=764bp
GGCAGGTTCACGGTCATTTTTACGTGGAACAACATCGCAGGTGTCCTCTT
GTTATTTATCGCGACGGAAGAACGCCAGGCGCTCTTCATCGATGGCCAGG
CCCAGGCCCGGAGCGGTGGAGACATGCAGGTGGAAATCGCGGTACACCAG
CGGCTCGGCGAGGATGTCTTCGGTGAGCAGCAGCGGGCCGAACAGCTCGG
TGTCCCACGCCAGTTTGTTCAAGGTGAGAAAGGCATGGGCCGAGGCCAGG
GTGCCGATACCGCCTTCGAGCATGGTGCCGCCGTACAGGCCGATGCCCGC
CGCTTCGGCAATCGCCGCGGTGCGCAATACCGCACGCGGGCCGCCGTTTT
TAGCGATCTTCAGCGCGAACACCGAGGCCGCGCCTTCGCGGGCCAGGTTG
AAGGCGTCTTCCACACATTCGATGGATTCGTCGGCCATGATCGGCGCCGG
GCTCGACAGGTTGAGCCGGGCCATGCCGCCACGGTTATTGCGCGAAATCG
GCTGTTCGATCAGGTCGATACCGTTGTCGCCCAACACCTTGCAGGCGCGC
AGGGCCACNGCTTCGTCCCCAGCCTGTTTGACGTCGACTCGCACGCTGGC
GCGATCGCCCAGGCTTTTTGATGGGGATGACGTGAAGCCNGTTCTGGCTG
GATTCACCGGCACGATCTTTATTTAAAATTCGGTGGCGGGGCAGGTCAAC
ATCTTTCCGGCCGGGGAGTTTTTCGGGTTGCCTGGCAGGGCCACCCCCGG
AGGTCCCCCCGCCC
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