EY728448

Overview
NameEY728448
Unique NameEY728448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: AB13I_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=TGD3 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.217e-56
Identity = 123/182 (67.58%), Postives = 142/182 (78.02%), Query Frame = 2
Query:  275 QRKVVCACVAPPRDLGTDGFPATKFNDSSKSENVNTLFEP-EDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNN-SELVRE-IGCCGLXELRS-LPS 808
            +RKV C C+APP++L  D   ATKF+  +KS          E+D DVLI+CR+VYKSFGEKHIL+GVSFKIRHGEAVG+IGPSGTGKSTILKI+AGLLAPD+GEVYIRG KRAGLISDEEISGL IGLVFQSAALFDSL+VRENVG  LYE  +   N  SELV + +   GL  + + LPS
Sbjct:   40 RRKVSCCCIAPPQNLDND---ATKFDSLTKSGGGMCKERGLENDSDVLIECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQTLAAVGLKGVENRLPS 218          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_BRAJA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bradyrhizobium japonicum GN=cysA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.621e-15
Identity = 49/116 (42.24%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVR 763
            I+ RN+ K FG    L GV+ K+ +GE + ++GPSG+GK+T+L+IIAGL  PD GEV   G       + E      +G VFQ  ALF  +TV ENV   L   PR V      +R
Sbjct:    3 IEVRNLVKKFGSFAALDGVNLKVDNGELLALLGPSGSGKTTLLRIIAGLDWPDSGEVSFNGEDALAQGARER----HVGFVFQHYALFRHMTVFENVAFGLRVQPRAVRKEEARIR 114          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_LEGPA (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila (strain Paris) GN=potA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVRE 766
            LI+ R +YKS+G   IL  VS  + HGE + ++GPSG GK+T+L++I+G   P +GE++I G      ++        +  VFQS ALF  L+V ENV   L    RC   +++ ++E
Sbjct:    5 LIEIRQIYKSYGNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISGFEQPTQGEIFINGQ----CVNQLPPQKRDVHTVFQSYALFPHLSVFENVAFAL----RCKKTSNQEIKE 114          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_MESVI (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Mesostigma viride GN=cysA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.051e-14
Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 2
Query:  410 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            +LID  N+ K FG    L  ++ +I+ G  + ++GPSG+GKST+L+IIAGL  PD G ++I G   +G      I    IG VFQ+ ALF ++TV +N+
Sbjct:    3 ILID--NISKKFGNFQALNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGLDTPDEGTIWISGKNASGY----SIQSRNIGFVFQNYALFKNMTVYDNI 95          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_LEGPH (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=potA PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVRE 766
            LI+ R +YKS+G   IL  VS  + HGE + ++GPSG GK+T+L++I+G   P +GE++I G      ++        +  VFQS ALF  L+V ENV   L    RC    ++ +R+
Sbjct:    5 LIEIRQIYKSYGNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISGFEQPTQGEIFINGQ----CVNQLPPQKRDVHTVFQSYALFPHLSVFENVAFAL----RCKKTPNQEIRK 114          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_PSESM (Sulfate/thiosulfate import ATP-binding protein cysA OS=Pseudomonas syringae pv. tomato GN=cysA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVRE 766
            I+ RNV K+F     L  +S  I+ GE V ++GPSG GK+T+L+IIAGL  PD G +   G      +S  ++    +G VFQ  ALF  +TV +NV   L   P+    N   + E
Sbjct:    3 IEVRNVSKNFNAFKALNNISLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDDGSIVFHGED----VSGHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKSERPNETRIAE 115          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: MALK_MANSM (Maltose/maltodextrin import ATP-binding protein malK OS=Mannheimia succiniciproducens (strain MBEL55E) GN=malK PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.341e-14
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            +  RNV KS+G+ HI + ++ +I  GE V  +GPSG GKST+L++IAGL     GE+YI G K   L++D E S   IG+VFQS AL+  L V +N+
Sbjct:    4 VSLRNVGKSYGDVHISKDINLEINEGEFVVFVGPSGCGKSTLLRMIAGLEDITTGELYI-GEK---LMNDVEPSKRGIGMVFQSYALYPHLDVADNM 96          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_METCA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Methylococcus capsulatus GN=cysA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.341e-14
Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPR 733
            I+ RN+ KSFG    L+G+   I  GE V ++GPSG GK+T+L+IIAGL A D G++ + G       +   +    +G VFQ  ALF  ++V EN+   L   PR
Sbjct:    3 IEIRNITKSFGSFQALKGIDLTIGSGELVALLGPSGCGKTTLLRIIAGLEAADSGQILLHGED----TTHRHVRERRVGFVFQHYALFRHMSVFENIAFGLRVRPR 104          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_CHLVU (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Chlorella vulgaris GN=cysA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.058e-14
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGL-ISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            N+ K FG    L  V+ +I++G  VG++GPSG+GKST+L+++AGL  PD G +++ G     + + D E     IG VFQ+ ALF  LTV ENV
Sbjct:    7 NISKRFGSFQALDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPDSGRIWLEGQDATQMKLQDRE-----IGFVFQNYALFPHLTVSENV 95          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_LEGPL (Spermidine/putrescine import ATP-binding protein potA OS=Legionella pneumophila (strain Lens) GN=potA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.993e-14
Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVRE 766
            LI+ R +YKS+G   IL  VS  + HGE + ++GPSG GK+T+L++I+G   P  GE++I G      ++        +  VFQS ALF  L+V ENV   L    RC    ++ +R+
Sbjct:    5 LIEIRQIYKSYGNTPILNNVSLNVNHGEFLTLLGPSGCGKTTLLRLISGFEQPTLGEIFINGQ----CVNQLPPQKRDVHTVFQSYALFPHLSVFENVAFAL----RCKKTPNQEIRK 114          
The following BLAST results are available for this feature:
BLAST of EY728448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
AB13I_ARATH4.217e-5667.58Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplast... [more]
CYSA_BRAJA1.621e-1542.24Sulfate/thiosulfate import ATP-binding protein cys... [more]
POTA_LEGPA6.161e-1538.14Spermidine/putrescine import ATP-binding protein p... [more]
CYSA_MESVI1.051e-1442.42Probable sulfate/thiosulfate import ATP-binding pr... [more]
POTA_LEGPH1.793e-1438.14Spermidine/putrescine import ATP-binding protein p... [more]
CYSA_PSESM1.793e-1438.46Sulfate/thiosulfate import ATP-binding protein cys... [more]
MALK_MANSM2.341e-1447.42Maltose/maltodextrin import ATP-binding protein ma... [more]
CYSA_METCA2.341e-1440.57Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_CHLVU3.058e-1444.68Probable sulfate/thiosulfate import ATP-binding pr... [more]
POTA_LEGPL3.993e-1438.14Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728448 ID=EY728448; Name=EY728448; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGAAACCCAGTAGTCGAAATGCTTCGAAAACCACTTTTTAT
GTGAACTTCCATTGATTATTTTATTTTTTTCATTTTGTGGTTTTTAGACC
AAATATCAATCTGCGTCTGCTTTACAATTATAAACACCGAAAATGGTCTC
TTTATCTTCATCTGGTTCACTGTTATTTCCTCTCGCAACAAAAAGTGTTA
GTTCTCGATTATCTAGACTTGCTAATTCGGACAAAAAACCGGTCAATTCG
TTCTGTTATAAGGCGAAAGAAGAACAGAGAAAAGTTGTTTGTGCTTGTGT
AGCGCCTCCAAGGGACTTGGGCACTGATGGATTCCCTGCCACCAAATTCA
ATGATTCATCTAAATCAGAGAATGTAAATACCTTATTCGAACCCGAGGAT
GATGGTGATGTTCTCATCGATTGTCGGAATGTTTACAAGTCATTTGGGGA
AAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAAGCTG
TTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGATT
ATTGCTGGGCTTCTTGCTCCAGACAGGGGAGAGGTTTACATTCGAGGTAN
GAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCNGATTG
GATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGAA
AATGTTGGTTCCTTTCTGTATGAAAATCCAAGATGCGTGATGAACAATTC
AGAACTGGTGAGAGAAATTGGCTGCTGTGGATTAANGGAGTTGAGGTCGC
TACCATCTTATTGTCTGTTGATGAAAAAAAATTGCTTTACTCCATCCTAA
TTTCGATACCACAGGAATA
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