EY728435

Overview
NameEY728435
Unique NameEY728435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12156 contig Csv1_Contig12156:3..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.825e-40
Identity = 107/254 (42.13%), Postives = 136/254 (53.54%), Query Frame = 1
Query:  127 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELK-------RSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK----------------SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP---NETPAAAPKSSVKANS-QKSV--PKACLSPVQPSLNPNFNYLNNSDQDYLHNVSILEE 801
            MCGGAIIS +IPP    R  ++T E++WP+LK       + SNK+     +DDDFEADFQGFK                       KPF F+A  K                ++    V+  EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF+T              IRG KAKVNFP   N +  +  + S K N+ QKSV  P   ++ VQ   + +  Y NNS  +   ++S +EE
Sbjct:    1 MCGGAIISDFIPPP---RSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNV------KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEE 245          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.113e-40
Identity = 108/245 (44.08%), Postives = 134/245 (54.69%), Query Frame = 1
Query:  127 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRS--SNKKYSKPI-----VDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK------SHGSTAVKHVE----QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNET-PAAAPKSSVKANSQKSVPKACLSPVQPSLNPNFNYLNNSDQDYLHNVSILEENH 807
            MCGGAIIS +IPP    R +++T+E++WP+LK++   +KK SK        D +FEADFQGFK                       KPF F++  K      + GS   K V      A+KS  RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T              IRG KAKVNFP E   A + K SVKAN QK V K       P+ NP+   + NS+  +  N+  +EE H
Sbjct:    1 MCGGAIISDFIPPP---RSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADV---KPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAK-------PNPNPSPALVQNSNISF-ENMCFMEEKH 231          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 88/224 (39.29%), Postives = 115/224 (51.34%), Query Frame = 1
Query:  127 MCGGAIISGYIPPTVPGRP---KKLTAEYLWPELKR----SSNKKYSKPIV---DDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVE-QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQPSLNPNFNYLNNSD 765
            MCGGAII       + G P   ++ T   LWPE K+       +++    V   D+DFEADF+ F+                         F  +  R +  +      +  A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+              IRGKKAKVNFP E P  A K    + + K+ PK+ +   +P++ P FN L N++
Sbjct:    1 MCGGAIIHH-----LKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP-EAPTTAQKRRAGSTTAKA-PKSSVEQ-KPTVKPAFNNLANAN 216          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27
Identity = 80/203 (39.41%), Postives = 93/203 (45.81%), Query Frame = 1
Query:  127 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNF--------PNETPAAAPKSSVKANSQKSVPKACL 711
            MCGGAIIS Y P     + +KLTAE LW EL  S+          DDF   +   K                               + +    AVK  +  +    RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT              IRG KAK+NF        PN TP   P SS ++  Q    K C+
Sbjct:    1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAA---------DDFWGFYSTSKLHP--------------------------TNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTP---PPSSPRSTDQPPAKKVCV 165          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 1
Query:  433 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPN 639
            ++  +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T              IRG+KAK+NFPN
Sbjct:   39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPN 107          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19
Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 1
Query:  445 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPA-----AAPKSSVKANSQKSVPKACLSPVQPSLNPNFNYLNNSDQDYLHNVSILEE 801
            ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT              IRG KAK+NFPNE+       A     V+ N +  +  A +S    S   +F +  N+    L +   LE+
Sbjct:   18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSCLDFLWEENNPDTLLIDTQWLED 141          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17
Identity = 50/116 (43.10%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  373 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-------NETPAAAPKSSVKANSQKSV 696
            T S+ R+   S   K  E   K  +RK +KN YRG+RQRPWGK+AAEIRDP +  RVWLGTF T               RG +AK+NFP         +P AA     KA++  SV
Sbjct:  104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAADDIGAKASASASV 219          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 1
Query:  424 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQ---PSLNPNFNYLNNSDQDYLHNVSILEENH 807
            +Q +   ++ R+  YRG+RQRPWGKWAAEIRDP K  RVWLGTF T               +G KAK+NFP         +++ +++ + V ++  SP     P      ++    +QD L    +L  N+
Sbjct:   25 DQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTI-SHAPRGVSESMNSPPPRPGPPSTTTTSWPMTYNQDILQYAQLLTSNN 154          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 1
Query:  367 PFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAP 660
            P +F+    SH     + + +A     R++K +YRG+RQRPWGKWAAEIRDP +  RVWLGTF+T               RG KAK+NFP +     P
Sbjct:   45 PSSFARVDSSHNPIE-ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPP 141          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 53/159 (33.33%), Postives = 73/159 (45.91%), Query Frame = 1
Query:  403 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSV-----------KANSQKSVPKACLSPVQPSLN------PNFNYLNNSDQDYLHNVSILEENHX*SIWIY 828
            +TA    E +  S ++ R+ +YRG+RQRPWGKWAAEIRDP K  RVWLGTF+                RG KAK+NFP       P S+               S+ S     L P++P+ N      P     N S  +        +++H  S+ +Y
Sbjct:  165 TTATASSETSSFSGDQPRR-RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPASNQSVHSQPLMQSYNLSYSEMARQQQQFQQHHQQSLDLY 322          
The following BLAST results are available for this feature:
BLAST of EY728435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
RAP22_ARATH1.825e-4042.13Ethylene-responsive transcription factor RAP2-2 OS... [more]
RA212_ARATH3.113e-4044.08Ethylene-responsive transcription factor RAP2-12 O... [more]
ERF1_ORYSJ2.920e-3039.29Ethylene-responsive transcription factor 1 OS=Oryz... [more]
RAP23_ARATH5.155e-2739.41Ethylene-responsive transcription factor RAP2-3 OS... [more]
ERF71_ARATH1.776e-1963.77Ethylene-responsive transcription factor ERF071 OS... [more]
ERF73_ARATH6.748e-1941.13Ethylene-responsive transcription factor ERF073 OS... [more]
EF109_ARATH4.836e-1743.10Ethylene-responsive transcription factor ERF109 OS... [more]
EF113_ARATH3.135e-1634.35Ethylene-responsive transcription factor ERF113 OS... [more]
EF110_ARATH3.135e-1642.86Ethylene-responsive transcription factor ERF110 OS... [more]
ABR1_ARATH6.983e-1633.33Ethylene-responsive transcription factor ABR1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728435 ID=EY728435; Name=EY728435; organism=Citrus sinensis; type=EST; length=846bp
CACGCGTCCGAGAATCCAAAACTCTCTCAAGCCAACAAAAGCAAATTTTA
CATTTAACCCATTCTCTCCTAAAAATCTTTTCTCTTTAGTGCCTGAACAA
ACCAGAAGAAACGAGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCG
GGCTACATCCCGCCCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGA
GTATCTCTGGCCGGAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGC
CGATCGTCGACGATGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGAT
GAAGAAGAGTCTGACATTGATGGTGACGTGGACGTTGATGCCGACTTGAT
GATGGCTGATATTAAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATG
GATCTACAGCCGTGAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGA
AAGAGGAAGAATCAATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATG
GGCTGCTGAGATCCGTGACCCCACAAAAGGGGTTCGTGTCTGGCTAGGAA
CTTTCAATACCGCTGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGG
AGGATCCGTGGGAAGAAAGCTAAGGTTAACTTTCCAAATGAAACTCCTGC
TGCTGCTCCAAAGAGCTCAGTGAAGGCNAACTCTCAGAAATCCGTTCCCA
AAGCTTGCCTAAGCCCCGTGCAGCCAAGTTTGAACCCAAACTTCAATTAC
TTGAACAACTCCGATCAGGATTACTTACACAATGTGAGTATCTTGGAGGA
GAACCACANGTGATCAATATGGATATATGGGCCCCCCCCCTGATGA
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