EY728427

Overview
NameEY728427
Unique NameEY728427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728427 vs. ExPASy Swiss-Prot
Match: ARK2_ARATH (Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2)

HSP 1 Score: 357.066 bits (915), Expect = 7.641e-98
Identity = 180/214 (84.11%), Postives = 196/214 (91.59%), Query Frame = 3
Query:   51 EANQEKIVEAGGXXXXXXXXXXFEDETIRRVAAGAIANLAMNEANQELIMAQGGISLLSTTAADAEDPHTLRMVAGAIANLCGNDKLQMKLRSEGGIRALLGMVRCGHPDVLSQVARGIANFAKCESRAATQGVKSGRSLLVEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVXAREMISGGALWELVRISRDCSREDIRSLAHRTLSSA 692
            EANQEKIVEAGG          +EDET+RRVAAGAIANLAMNE +Q+LI+ QGGISLLS TAADAEDP TLRMVAGAIANLCGNDKLQ +L S+GGI+ALLGMVRCGHPDVL+QVARGIANFAKCESRA TQGVKSGRSLL+EDGALPWIVQ+AN+EAAPIRRHIELALCHLAQHEV A+EMISGGALWELVRIS++CSREDIRSLAHRTLSS+
Sbjct:  667 EANQEKIVEAGGLTSLLMLLRSYEDETVRRVAAGAIANLAMNEVSQQLIVDQGGISLLSLTAADAEDPQTLRMVAGAIANLCGNDKLQARLWSDGGIKALLGMVRCGHPDVLAQVARGIANFAKCESRATTQGVKSGRSLLIEDGALPWIVQHANDEAAPIRRHIELALCHLAQHEVNAKEMISGGALWELVRISKECSREDIRSLAHRTLSSS 880          
BLAST of EY728427 vs. ExPASy Swiss-Prot
Match: ARK2_ORYSJ (Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 1.933e-95
Identity = 175/214 (81.78%), Postives = 193/214 (90.19%), Query Frame = 3
Query:   51 EANQEKIVEAGGXXXXXXXXXXFEDETIRRVAAGAIANLAMNEANQELIMAQGGISLLSTTAADAEDPHTLRMVAGAIANLCGNDKLQMKLRSEGGIRALLGMVRCGHPDVLSQVARGIANFAKCESRAATQGVKSGRSLLVEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVXAREMISGGALWELVRISRDCSREDIRSLAHRTLSSA 692
            EANQEKIVEAGG           EDETIRRVAAGAIANLAMNE NQ+LIMAQGG+SLLS TA+DAEDP TLRMVAGAIANLCGNDKLQ +LR EGGI+ALLGMV+CGHPDVL+QVARGIANFAKCESRAATQG K G+SLL++DGALPWIV+NANNEAAPIRRHIELALCHLAQHEV ++++IS GALWELVRISRDCSREDIR LA+RTL+S+
Sbjct:  664 EANQEKIVEAGGLTSLLMLLRSSEDETIRRVAAGAIANLAMNETNQDLIMAQGGVSLLSMTASDAEDPQTLRMVAGAIANLCGNDKLQTRLRGEGGIKALLGMVKCGHPDVLAQVARGIANFAKCESRAATQGNKVGKSLLIDDGALPWIVKNANNEAAPIRRHIELALCHLAQHEVNSKDIISEGALWELVRISRDCSREDIRMLAYRTLTSS 877          

HSP 2 Score: 21.1718 bits (43), Expect = 1.933e-95
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  689 SLTFKAEMRRVRIE 730
            S T ++EMRR+RIE
Sbjct:  877 SPTLQSEMRRLRIE 890          
BLAST of EY728427 vs. ExPASy Swiss-Prot
Match: ARK3_ARATH (Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 6.266e-92
Identity = 172/214 (80.37%), Postives = 185/214 (86.45%), Query Frame = 3
Query:   51 EANQEKIVEAGGXXXXXXXXXXFEDETIRRVAAGAIANLAMNEANQELIMAQGGISLLSTTAADAEDPHTLRMVAGAIANLCGNDKLQMKLRSEGGIRALLGMVRCGHPDVLSQVARGIANFAKCESRAATQGVKSGRSLLVEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVXAREMISGGALWELVRISRDCSREDIRSLAHRTLSSA 692
            EANQ++IVEAGG           EDETI RVAAGAIANLAMNE NQELIM QGGI LLS+TAA+AEDP TLRMVAGAIANLCGNDKLQ KLRSEGGI ALLGMVRCGHPDVL+QVARGIANFAKCESRA+TQG K G+SLL+EDGAL WIVQNA  E A IRRHIELALCHLAQHE  A+EM+  GA+WELVRISRDCSREDIRSLAHRTL+S+
Sbjct:  691 EANQQQIVEAGGLTSLLMLLKNTEDETIHRVAAGAIANLAMNETNQELIMDQGGIGLLSSTAANAEDPQTLRMVAGAIANLCGNDKLQTKLRSEGGIAALLGMVRCGHPDVLAQVARGIANFAKCESRASTQGTKRGKSLLIEDGALSWIVQNAKTETAAIRRHIELALCHLAQHEGNAKEMVKEGAMWELVRISRDCSREDIRSLAHRTLTSS 904          
BLAST of EY728427 vs. ExPASy Swiss-Prot
Match: ARK1_ORYSJ (Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0152900 PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 4.679e-63
Identity = 123/213 (57.75%), Postives = 158/213 (74.18%), Query Frame = 3
Query:   51 EANQEKIVEAGGXXXXXXXXXXFEDETIRRVAAGAIANLAMNEANQELIMAQGGISLLSTTAADAEDPHTLRMVAGAIANLCGNDKLQMKLRSEGGIRALLGMVRCGHPDVLSQVARGIANFAKCESRAATQGVKSGRSLLVEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVXAREMISGGALWELVRISRDCSREDIRSLAHRTLSS 689
            + NQEKIVE GG           E+ TI RV AGAIANLAMN +NQ LIM +GG  LL+  A+   DP TLRMVAGA+ANLCGN+KL + L+ +GGI+ALLGM R GH +V++Q+ARG+ANFAKCESR  +QG + GRSLL+E+G L W+V N++  +A  RRHIELA CHLAQ+E  AR++I  G + EL+RISR+ SR+D R+LA + L+S
Sbjct:  724 DVNQEKIVEEGGLDALLSLLETSENTTIHRVTAGAIANLAMNGSNQGLIMNKGGARLLANIASKTNDPQTLRMVAGALANLCGNEKLHVMLKQDGGIKALLGMFRTGHNEVIAQIARGMANFAKCESRVISQGHRKGRSLLIEEGVLNWMVANSSAFSASTRRHIELAFCHLAQNEDNARDIILTGGIKELLRISRESSRDDTRNLAKKALNS 936          
BLAST of EY728427 vs. ExPASy Swiss-Prot
Match: ARK1_ARATH (Armadillo repeat-containing kinesin-like protein 1 OS=Arabidopsis thaliana GN=ARK1 PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 8.547e-57
Identity = 114/213 (53.52%), Postives = 151/213 (70.89%), Query Frame = 3
Query:   51 EANQEKIVEAGGXXXXXXXXXXFEDETIRRVAAGAIANLAMNEANQELIMAQGGISLLSTTAADAEDPHTLRMVAGAIANLCGNDKLQMKLRSEGGIRALLGMVRCGHPDVLSQVARGIANFAKCESRAATQGVKSGRSLLVEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVXAREMISGGALWELVRISRDCSREDIRSLAHRTLSS 689
            EANQ KIVE GG           ++ TI RVA+GAIANLAMNE +Q+LIM +GG  LL+      +DP TLRMVAGA+ANLCGN+K    L+ E GI+ LL M + G+ D+++QVARG+ANFAKCE+R   QG + GRSLL+E+G L W+  N++ ++A  +RHIELALCHLAQ+E  A +    G++ E+VRIS + SR+DIRSLA + L +
Sbjct:  833 EANQVKIVEEGGVEALLMLVQSSQNSTILRVASGAIANLAMNEKSQDLIMNKGGAQLLAKMVTKTDDPQTLRMVAGALANLCGNEKFLKLLKEEEGIKGLLTMAQSGNIDIIAQVARGMANFAKCETREIMQGRRKGRSLLLEEGVLEWLTSNSHIDSASTQRHIELALCHLAQNEENANDFKRTGSVTEIVRISVESSRDDIRSLAKKILKT 1045          
The following BLAST results are available for this feature:
BLAST of EY728427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ARK2_ARATH7.641e-9884.11Armadillo repeat-containing kinesin-like protein 2... [more]
ARK2_ORYSJ1.933e-9581.78Armadillo repeat-containing kinesin-like protein 2... [more]
ARK3_ARATH6.266e-9280.37Armadillo repeat-containing kinesin-like protein 3... [more]
ARK1_ORYSJ4.679e-6357.75Armadillo repeat-containing kinesin-like protein 1... [more]
ARK1_ARATH8.547e-5753.52Armadillo repeat-containing kinesin-like protein 1... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-E12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728427 ID=EY728427; Name=EY728427; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGAATTTGTCAAAACGATTTGCGTTCTCTCTGTTCTAAGCA
GAAGCGAATCAGGAAAAGATTGTTGAAGCTGGTGGTCTTTCTTCCTTGCT
AATGCTCCTTCGAAGCTTTGAGGATGAGACTATTCGCAGGGTAGCAGCAG
GTGCGATTGCCAATCTTGCAATGAACGAAGCCAATCAAGAACTTATAATG
GCACAAGGAGGAATCAGTTTGTTATCGACGACAGCAGCTGATGCTGAGGA
TCCTCACACTCTACGCATGGTCGCTGGAGCTATTGCTAATTTATGTGGCA
ATGATAAGCTTCAAATGAAGCTGAGGTCTGAAGGTGGAATCAGGGCCTTG
CTTGGGATGGTGAGATGCGGACATCCAGACGTTCTATCCCAAGTTGCACG
AGGAATTGCTAACTTTGCAAAATGCGAGTCCCGAGCTGCTACTCAAGGTG
TAAAAAGTGGCAGATCTCTTCTCGTAGAAGATGGTGCACTTCCGTGGATT
GTACAAAATGCAAACAATGAAGCTGCACCAATCAGGCGTCACATTGAGCT
TGCACTCTGCCACCTGGCACAGCATGAAGTANATGCGAGAGAGATGATCA
GTGGAGGTGCCCTCTGGGAGCTAGTTCGTATCTCACGGGACTGTTCTCGA
GAGGACATAAGGAGTCTAGCCCACCGAACTCTAAGTTCAGCCTCACATTC
AAAGCTGAAATGCGGCGGGTACGGATAGAGTTTTAATCTCCGGACTGGGC
TTATTCAGTTATTCCCTTGGTGCCTCTATTCGGCTGATGGTGGGAAATTT
GCTCTGGCCTGCTGCATAGGCTTAGCCAAGAACCCCATGTTCTTGCCCGG
GGCGACCCCCATCCTCCCAAAT
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