EY728424

Overview
NameEY728424
Unique NameEY728424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11743 contig Csv1_Contig11743:1..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728424 vs. ExPASy Swiss-Prot
Match: Y1457_ARATH (Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.322e-43
Identity = 74/180 (41.11%), Postives = 100/180 (55.56%), Query Frame = 1
Query:  163 LEITDRTSFSGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMXXXXXXXXXXXXGDPLKMAMDSIVKGLFLQSTIQERSQDFV-AMSSYLPVLANIXXXXXXXXXXXXXXSASAYAHARLDAVKAQTLILCSGRD 699
            + + DRT F GLLK++E  +R E     N+P+YLVG+S G CLALAVAARN  +DLVLIL NPATSF +S LQ ++PI  E++  ++            GDP+KMA   I   L     I++  Q     M   L  L  I              S  AYA++R+ AV+A+ L+L SG+D
Sbjct:  159 IPVLDRTPFEGLLKVVEDVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLPI-LEMVPEELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLTKTMLPLLSELGGIIPRETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKD 337          

HSP 2 Score: 69.707 bits (169), Expect = 6.322e-43
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 3
Query:   12 KDMIKSDGGPPRWFSPLECGSHNRNSRSPLLLFLPGIDGVGLGLIRQHQRLG 167
            K+++K+DGGPPRWFSP++CG    +  +P LLFLPG+DG G+GL+  H+ LG
Sbjct:  100 KEILKADGGPPRWFSPVDCGRPVED--APTLLFLPGMDGTGMGLVPHHKALG 149          

HSP 3 Score: 21.557 bits (44), Expect = 6.322e-43
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  704 LLPSEEEGDRTCRALPNC 757
            +LPS+EE  R    L NC
Sbjct:  339 MLPSQEEAKRLHGLLKNC 356          
BLAST of EY728424 vs. ExPASy Swiss-Prot
Match: Y3684_ARATH (Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.246e-41
Identity = 70/183 (38.25%), Postives = 100/183 (54.64%), Query Frame = 1
Query:  163 LEITDRTSFSGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG-QMXXXXXXXXXXXXGDPLKMAMDSIVKGLFLQ---STIQERSQDFVAMSSYLPVLANIXXXXXXXXXXXXXXSASAYAHARLDAVKAQTLILCSGRD 699
            + ++DRT    L+KLIE T++SEN R  NRP+YLVGES+GACLAL VAARNP++DL LIL NPAT     ++Q +  +   L  G               GDPL   +D++     +Q          +D +A+S+ LP L+ +               A A  ++ + +V+A+TLIL SGRD
Sbjct:  154 IPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPNIDLSLILVNPATHVNNFMVQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSNEFSVQRMGGVGGGMLRDVLAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIYSVRAETLILLSGRD 336          

HSP 2 Score: 77.411 bits (189), Expect = 3.246e-41
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 3
Query:   12 KDMIKSDGGPPRWFSPLECGSHNRNSRSPLLLFLPGIDGVGLGLIRQHQRLGD 170
            ++ +   GGPPRWFSPLECG+   NS  PLLL+LPGIDG GLGLIR H++LG+
Sbjct:   95 REFVGDGGGPPRWFSPLECGAQATNS--PLLLYLPGIDGTGLGLIRHHKKLGE 145          

HSP 3 Score: 20.7866 bits (42), Expect = 3.246e-41
Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 2
Query:  707 LPSEEEGDRTCRALPNC 757
            L  EE+ DR  R LP C
Sbjct:  339 LLKEEDIDRYSRTLPKC 355          
The following BLAST results are available for this feature:
BLAST of EY728424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1457_ARATH6.322e-4341.11Acyltransferase-like protein At1g54570, chloroplas... [more]
Y3684_ARATH3.246e-4138.25Acyltransferase-like protein At3g26840, chloroplas... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-E08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728424 ID=EY728424; Name=EY728424; organism=Citrus sinensis; type=EST; length=829bp
CCACGCGTCCGAAAGATATGATCAAATCGGACGGTGGACCGCCTCGGTGG
TTCTCCCCCTTAGAGTGTGGGTCCCACAATCGTAATTCTCGTTCTCCTCT
CCTCCTCTTTTTACCTGGGATTGATGGTGTTGGTCTTGGACTAATAAGGC
AGCATCAAAGACTTGGAGATTACAGATCGGACATCATTTTCAGGTCTACT
GAAACTGATTGAAAGAACTATAAGGTCAGAGAATTGCCGTTCATCAAATA
GACCTGTCTATCTTGTTGGAGAATCTTTAGGAGCATGCCTTGCACTAGCT
GTTGCAGCCCGTAATCCTGATATGGATCTTGTGCTAATTCTGGCTAACCC
AGCTACGTCTTTTAGGAAGTCATTGTTGCAAACCATAATGCCTATACCGG
CGGAGCTCATGTCAGGCCAAATGACTCTTACCCTGTCTTATTTGTTGAGC
TTACTGACAGGTGATCCTTTGAAGATGGCAATGGATAGCATAGTGAAAGG
ACTCTTTCTTCAATCAACAATTCAAGAGCGATCGCAGGACTTTGTTGCAA
TGTCATCTTACCTCCCCGTTCTAGCCAATATCTTACCCAAGGAAACACTC
CTCTGGAAGCTAGAGTTGCTTAAGTCAGCTTCTGCATATGCCCATGCACG
TCTTGATGCTGTAAAAGCTCAAACACTGATACTTTGCAGTGGAAGGGATT
AGTTTACTGCCAAGTGAGGAGGAAGGTGACAGAACTTGCCGTGCTCTACC
CAACTGTCAAAATCTTAGGTTGGGTGGGGGGAGTCTATTTCGGTTTTTGG
GAAAAATGGTTAAATTGTGGCACACCACA
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