EY728383

Overview
NameEY728383
Unique NameEY728383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728383 vs. ExPASy Swiss-Prot
Match: F135B_MOUSE (Protein FAM135B OS=Mus musculus GN=FAM135B PE=2 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 4.260e-43
Identity = 94/218 (43.12%), Postives = 139/218 (63.76%), Query Frame = 1
Query:  157 LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLKKLKSTVCIHQLTFTDDPDLKKTFFYKLSQQKTLENFRHIILLSSPQDGYVPYHSARMNCARQHLGTTQKGQGILEMLKN 804
            + +VV VHG  G+  DLRL++    L  P  K+DFLMSE N+  T  DF  M  RL  E+I  ++     +SR        +SF+GHS+GNIIIR+ L       YL  L+T++S+SGPHLG LY++++L ++G+WL++KLK +  + QLTF D+ DL+K F Y+LSQ+  L+ F++++L++SPQD YVP+HSAR+   +  L     G    EM+ N
Sbjct: 1136 IHLVVCVHGLDGNSADLRLVKTFIELGLPGGKLDFLMSEKNQTDTFADFDTMTDRLLDEIIQHIQLYNLSISR--------ISFIGHSLGNIIIRSVLTRPRFRYYLNKLHTFLSLSGPHLGTLYNNSTLVSTGLWLMQKLKKSGSLLQLTFRDNADLRKCFLYQLSQKTGLQYFKNVVLVASPQDRYVPFHSARIEMCKTALKDRHTGPVYAEMINN 1345          
BLAST of EY728383 vs. ExPASy Swiss-Prot
Match: F135B_HUMAN (Protein FAM135B OS=Homo sapiens GN=FAM135B PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.564e-43
Identity = 94/218 (43.12%), Postives = 139/218 (63.76%), Query Frame = 1
Query:  157 LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLKKLKSTVCIHQLTFTDDPDLKKTFFYKLSQQKTLENFRHIILLSSPQDGYVPYHSARMNCARQHLGTTQKGQGILEMLKN 804
            + +VV VHG  G+  DLRL++    L  P  K+DFLMSE N+  T  DF  M  RL  E+I  ++     +SR        +SF+GHS+GNIIIR+ L       YL  L+T++S+SGPHLG LY++++L ++G+WL++KLK +  + QLTF D+ DL+K F Y+LSQ+  L+ F++++L++SPQD YVP+HSAR+   +  L     G    EM+ N
Sbjct: 1139 IHLVVCVHGLDGNSADLRLVKTFIELGLPGGKLDFLMSEKNQMDTFADFDTMTDRLLDEIIQHIQLYNLSISR--------ISFIGHSLGNIIIRSVLTRPRFRYYLNKLHTFLSLSGPHLGTLYNNSTLVSTGLWLMQKLKKSGSLLQLTFRDNADLRKCFLYQLSQKTGLQYFKNVVLVASPQDRYVPFHSARIEMCKTALKDRHTGPVYAEMINN 1348          
BLAST of EY728383 vs. ExPASy Swiss-Prot
Match: F135B_XENLA (Protein FAM135B OS=Xenopus laevis GN=fam135b PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.761e-42
Identity = 92/218 (42.20%), Postives = 136/218 (62.39%), Query Frame = 1
Query:  157 LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLKKLKSTVCIHQLTFTDDPDLKKTFFYKLSQQKTLENFRHIILLSSPQDGYVPYHSARMNCARQHLGTTQKGQGILEMLKN 804
            + +VV VHG  G+  DLRL++    L  P   +DFLMSE N+  T  DF  M  RL  E++  ++     +SR        +SF+GHS+G IIIR+ L       YL  L+T++S+SGPHLG LYS+++L N+G+WL++KLK +  + QLTF D+ DL+K F Y+LSQ+  L+ F++++L++SPQD YVP+HSAR+   +        G    EM+ N
Sbjct: 1109 IHLVVCVHGLDGNSADLRLVKTFLELGLPGANLDFLMSEKNQTDTFADFDAMTDRLIDEIVQHIQLYNLSISR--------ISFIGHSLGTIIIRSVLTRPRFRYYLNKLHTFLSLSGPHLGTLYSNSTLVNTGLWLMQKLKKSGSLLQLTFRDNADLRKCFLYQLSQKPGLQYFKNVVLVASPQDRYVPFHSARIEMCKNATKDRHTGPVYTEMINN 1318          
BLAST of EY728383 vs. ExPASy Swiss-Prot
Match: F135A_PONAB (Protein FAM135A OS=Pongo abelii GN=FAM135A PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 8.034e-42
Identity = 97/236 (41.10%), Postives = 143/236 (60.59%), Query Frame = 1
Query:  109 AGKKPCGTSQPQKGRE--LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLKKLKSTVCIHQLTFTDDPDLKKTFFYKLSQQKTLENFRHIILLSSPQDGYVPYHSARMNCARQHLGTTQKGQGILEMLKN 804
            A   P  + + + G E  + ++V VHG  G+  DLRL++    L  P  +IDFLMSE N+  T  DF  M  RL  E+I +++     VS        K+SF+GHS+GN+IIR+ L     + YL  L+T++S+SGPHLG LY+S++L N+G+W ++K K +  + QLT  D  D ++TF YKLS++  L  F++++L+ S QD YVPYHSAR+   +  L   Q GQ   EM+ N
Sbjct:  810 ASSVPYFSVEEEDGSEDGVHLIVCVHGLDGNSADLRLVKTYIELGLPGGRIDFLMSERNQNDTFADFDSMTDRLLDEIIQYIQIYSLTVS--------KISFIGHSLGNLIIRSVLTRPRFKYYLNKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQKWKKSGSLLQLTCRDHSDPRQTFLYKLSKKAGLHYFKNVVLVGSLQDRYVPYHSARIEMCKTALKDKQSGQIYSEMIHN 1037          
BLAST of EY728383 vs. ExPASy Swiss-Prot
Match: F135A_HUMAN (Protein FAM135A OS=Homo sapiens GN=FAM135A PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.049e-41
Identity = 97/236 (41.10%), Postives = 142/236 (60.17%), Query Frame = 1
Query:  109 AGKKPCGTSQPQKGRE--LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLKKLKSTVCIHQLTFTDDPDLKKTFFYKLSQQKTLENFRHIILLSSPQDGYVPYHSARMNCARQHLGTTQKGQGILEMLKN 804
            A   P  + + + G E  + ++V VHG  G+  DLRL++    L  P  +IDFLMSE N+  T  DF  M  RL  E+I +++     VS        K+SF+GHS+GN+IIR+ L     + YL  L+T++S+SGPHLG LY+S++L N+G+W ++K K +  + QLT  D  D ++TF YKLS +  L  F++++L+ S QD YVPYHSAR+   +  L   Q GQ   EM+ N
Sbjct: 1230 ASSVPYFSVEEEDGSEDGVHLIVCVHGLDGNSADLRLVKTYIELGLPGGRIDFLMSERNQNDTFADFDSMTDRLLDEIIQYIQIYSLTVS--------KISFIGHSLGNLIIRSVLTRPRFKYYLNKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQKWKKSGSLLQLTCRDHSDPRQTFLYKLSNKAGLHYFKNVVLVGSLQDRYVPYHSARIEMCKTALKDKQSGQIYSEMIHN 1457          
BLAST of EY728383 vs. ExPASy Swiss-Prot
Match: F135A_MOUSE (Protein FAM135A OS=Mus musculus GN=Fam135a PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 5.208e-41
Identity = 96/236 (40.68%), Postives = 141/236 (59.75%), Query Frame = 1
Query:  109 AGKKPCGTSQPQKGRE--LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLKKLKSTVCIHQLTFTDDPDLKKTFFYKLSQQKTLENFRHIILLSSPQDGYVPYHSARMNCARQHLGTTQKGQGILEMLKN 804
            A   P  +   + G E  + ++V VHG  G+  DLRL++    L  P  ++DFLMSE N+  T  DF  M  RL  E+I +++     VS        K+SF+GHS+GN+IIR+ L     + YL  L+T++S+SGPHLG LY+S++L N+G+W ++K K +  + QLT  D  D ++TF YKLS +  L  F++++L+ S QD YVPYHSAR+   +  L   Q GQ   EM+ N
Sbjct: 1221 ASSAPYFSMDEEDGSEDGVHLIVCVHGLDGNSADLRLVKTYIELGLPGGRVDFLMSERNQNDTFADFDCMTDRLLDEIIQYIQIYSLTVS--------KISFIGHSLGNLIIRSVLTRPRFKYYLSKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQKWKKSGSLLQLTCRDHSDPRQTFLYKLSNKAGLHYFKNVVLVGSLQDRYVPYHSARIEMCKTALKDKQSGQIYSEMIHN 1448          
The following BLAST results are available for this feature:
BLAST of EY728383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
F135B_MOUSE4.260e-4343.12Protein FAM135B OS=Mus musculus GN=FAM135B PE=2 SV... [more]
F135B_HUMAN5.564e-4343.12Protein FAM135B OS=Homo sapiens GN=FAM135B PE=2 SV... [more]
F135B_XENLA2.761e-4242.20Protein FAM135B OS=Xenopus laevis GN=fam135b PE=2 ... [more]
F135A_PONAB8.034e-4241.10Protein FAM135A OS=Pongo abelii GN=FAM135A PE=2 SV... [more]
F135A_HUMAN1.049e-4141.10Protein FAM135A OS=Homo sapiens GN=FAM135A PE=1 SV... [more]
F135A_MOUSE5.208e-4140.68Protein FAM135A OS=Mus musculus GN=Fam135a PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728383 ID=EY728383; Name=EY728383; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTA
CTTTAGAAATGTTGATGTGATAGATAAGCTTGGTTCACAAACAGGACGTA
GCTCTGAAGCTGGAAAAAAGCCATGTGGTACTAGCCAGCCACAAAAGGGT
CGTGAATTGAAGATTGTTGTCTTTGTGCATGGGTTTCAGGGGCATCATCT
GGATTTGCGGCTTATTCGGAATCAATGGCTTTTAATAGATCCAAAGATAG
ATTTTCTCATGTCAGAGGGGAATGAAGAAAAAACATCTGGAGACTTCAGA
GAAATGGGATTTCGGCTGGCTCATGAAGTGATTTCTTTTGTTAAAAAGAA
AATGGATAAAGTGTCTCGAACTGTTGGCCTGAGAAACATCAAGCTCAGTT
TTGTTGGCCATTCTATAGGAAATATCATTATAAGGGCAGCATTAGCAGAG
AGTATTATGGAACCATACCTACGATACCTGAATACATATGTTTCGGTATC
TGGTCCACATTTGGGGTATCTTTACAGTTCAAACTCTTTATTCAACTCTG
GGATGTGGCTTCTGAAGAAGTTGAAGAGTACAGTGTGCATTCATCAGCTC
ACTTTCACAGATGATCCAGATCTCAAGAAAACATTTTTTTACAAACTTTC
TCAGCAGAAGACACTGGAGAATTTTAGGCATATAATTCTGCTATCTTCCC
CACAGGATGGTTATGTTCCTTATCATTCGGCCAGAATGAACTGTGCCAGG
CAGCATCTTGGGACTACTCAAAAAGGGCAAGGAATTCTGGAGATGCTGAA
AAATGGCTGGACAGATAGGGGCCCTTCCCCGAAAACGGGTTTTATGCGCG
GGATGTCAATTTGAAACCTCCCCTAGGAAGGACTTTGCC
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