EY728369

Overview
NameEY728369
Unique NameEY728369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728369 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.413e-28
Identity = 73/156 (46.79%), Postives = 98/156 (62.82%), Query Frame = 2
Query:  116 SFRVAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVANRNSPIVDKNGVLTVIDRGNLVLLNQSDGTIWSSNVSR--EVKNPVARLLYNGNLVIRDNSGSNSTESYMCQSFDIPPDTMLHGMRWGWDLRTGLER 574
            +F +   + T +  I    TLVSP   FELGFF    S   Y+GIWY++ P  T VWVANR++P+ +  G L  I   NLVLL+ S+ ++WS+NV+R  E    VA LL NGN V+RD S SN+   ++ QSFD P DT+L  M+ G+DL+TGL R
Sbjct:   29 AFSINTLSSTESLTISSNRTLVSPGNVFELGFFKTTSSSRWYLGIWYKKFPYRTYVWVANRDNPLSNDIGTLK-ISGNNLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRD-SNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNR 182          
BLAST of EY728369 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.410e-28
Identity = 71/156 (45.51%), Postives = 101/156 (64.74%), Query Frame = 2
Query:  116 SFRVAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVANRNSPIVDKNGVLTVIDRGNLVLLNQSDGTIWSSNVSR--EVKNPVARLLYNGNLVIRDNSGSNSTESYMCQSFDIPPDTMLHGMRWGWDLRTGLER 574
            +F +   + T +  I    TLVSP   FELGFF    S   Y+GIWY+++ D T VWVANR++P+ +  G L  I   NLVLL  ++ ++WS+N++R  E    VA LL NGN V+RD+S ++++E Y+ QSFD P DT+L  M+ G+DL+TGL R
Sbjct:   29 AFSINTLSSTESLRISSNRTLVSPGNNFELGFFRTNSSSRWYLGIWYKKLLDRTYVWVANRDNPLSNAIGTLK-ISGNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASE-YLWQSFDYPTDTLLPEMKLGYDLKTGLNR 182          
BLAST of EY728369 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.258e-25
Identity = 68/158 (43.04%), Postives = 102/158 (64.56%), Query Frame = 2
Query:  110 SLSFRVAADTLTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVANRNSPIVDKNGVLTVIDRGNLVLLNQSDGTIWSSNVSR--EVKNPVARLLYNGNLVIRDNSGSNSTESYMCQSFDIPPDTMLHGMRWGWDLRTGLER 574
            +LS  +   + T +  I   +TLVSP   FE+GFF    +   Y+G+WY+++ D T VWVANR++P+ +  G L  I   NLVLL+ S+  +W +N++R  E    VA LL NGN V+RD+S ++++E Y+ QSFD P DT+L  M+ G++L+TGL R
Sbjct:   28 ALSIYINTLSSTESLTISSNKTLVSPGSIFEVGFFRT--NSRWYLGMWYKKVSDRTYVWVANRDNPLSNAIGTLK-ISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASE-YLWQSFDYPTDTLLPEMKLGYNLKTGLNR 181          
BLAST of EY728369 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.258e-25
Identity = 67/142 (47.18%), Postives = 89/142 (62.68%), Query Frame = 2
Query:  158 IRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVANRNSPIVDKNGVLTVIDRGNLVLLNQSDGTIWSSNVSR--EVKNPVARLLYNGNLVIRDNSGSNSTESYMCQSFDIPPDTMLHGMRWGWDLRTGLER 574
            I +  TLVSP    ELGFF    S   Y+G+WY+++ + T VWVANR++P+    G L  I   NLVLL+ S+ ++WS+N +R  E    VA LL NGN V+RD S  N    ++ QSFD P DT+L  M+ G+DLRTGL R
Sbjct:   42 ISNSRTLVSPGNVLELGFFRTPSSSRWYLGMWYKKLSERTYVWVANRDNPLSCSIGTLK-ISNMNLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRD-SNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNR 181          
BLAST of EY728369 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.557e-25
Identity = 66/148 (44.59%), Postives = 90/148 (60.81%), Query Frame = 2
Query:  158 IRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPD-TVVWVANRNSPIVDKNGVLTVIDRGNLVLLNQSDGTIWSSNVSR--EVKNPVARLLYNGNLVIRDNSGSNSTESYMCQSFDIPPDTMLHGMRWGWDLRTGLERDPTHRK 592
            I    TLVSP   FELGFF    S   Y+GIWY+++ D T VWVANR++P+    G L  I   N   L+ S+ ++WS+N++R  E    VA +L NGN V+RD S +N    ++ QSFD P DT+L  M+  +DL+TGL R  T R+
Sbjct:   40 ISSNRTLVSPGNVFELGFFRTNSSSRWYLGIWYKKVSDRTYVWVANRDNPLSSSIGTLK-ISGNNPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRD-SNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRR 185          
BLAST of EY728369 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.382e-20
Identity = 65/154 (42.21%), Postives = 89/154 (57.79%), Query Frame = 2
Query:  128 AADTLTPTTL--IRDGETLVSPSQRFELGFF------SPGKSQNRYVGIWYQQIPD--TVVWVANRNSPIVDKNGVLTVIDRGNLVLLNQSDGTIWSSNVSREVKNPV-ARLLYNGNLVIRDNSGSNSTESYMCQSFDIPPDTMLHGMRWGWDL 556
            + +TL+P     I   +TLVSP   FELGFF      SP  +   Y+GIWY+      T VWVANR++ + +  G L  I   +LVLL+ S+  +WS+N +     PV A LL NGN V+RD S +N  + +M QSFD P DT+L  M+ G +L
Sbjct:   28 STNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLK-ISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRD-SKTNDLDRFMWQSFDYPVDTLLPEMKLGRNL 179          
BLAST of EY728369 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.489e-19
Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 2
Query:  128 AADTLTPTTL--IRDGETLVSPSQRFELGFF------SPGKSQNRYVGIWYQQIPD--TVVWVANRNSPIVDKNGVLTVIDRGNLVLLNQSDGTIWSSNVSREVKNPV-ARLLYNGNLVIRDNSGSNSTESYMCQSFDIPPDTMLHGMRWG 547
            + +TL+P     I   +TLVSP   FELGFF      SP  +   Y+GIWY+      T VWVANR++ + +  G L  I   +LVLL+ S+  +WS+N +     PV A LL NGN V+RD S + + + +M QSFD P DT+L  M+ G
Sbjct:   28 STNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLK-ISHASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRD-SKTTALDRFMWQSFDYPVDTLLPEMKLG 176          
The following BLAST results are available for this feature:
BLAST of EY728369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SLSG3_BRAOL1.413e-2846.79S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
SLSG6_BRAOL2.410e-2845.51S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SRK6_BRAOE3.258e-2543.04Putative serine/threonine-protein kinase receptor ... [more]
SLSG2_BRAOA3.258e-2547.18S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
SLSG4_BRAOL5.557e-2544.59S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
SLSG0_BRAOA5.382e-2042.21S-locus-specific glycoprotein OS=Brassica oleracea... [more]
SLSG1_BRAOA3.489e-1941.72S-locus-specific glycoprotein BS29-1 OS=Brassica o... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728369 ID=EY728369; Name=EY728369; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGGAATCTCAAAAGATGTAGACATATTTTTCTCTTTTCAGT
TATATCAATGGAGATTCTTCCATGCTTCAACATCTTTAGTTCTTTGATTT
TCTACTGGGTCATTAAGTTTTCGTGTAGCAGCTGATACACTAACTCCAAC
AACACTCATCCGTGATGGTGAAACGTTAGTTTCACCGTCTCAAAGGTTTG
AGCTAGGCTTCTTCTCTCCTGGAAAATCACAGAACAGGTACGTGGGAATA
TGGTACCAGCAGATCCCTGATACAGTTGTGTGGGTTGCAAATAGAAATAG
TCCTATCGTTGACAAAAACGGAGTATTAACCGTTATCGACAGGGGAAATC
TTGTTCTTCTCAACCAATCAGATGGAACTATCTGGTCTTCCAACGTGTCT
AGAGAAGTAAAAAATCCAGTTGCACGACTCTTATATAATGGAAACCTTGT
TATTAGGGATAACTCCGGCAGTAATAGTACTGAGAGCTATATGTGTCAGA
GCTTCGACATACCACCAGACACTATGTTACACGGCATGAGATGGGGGTGG
GACTTAAGGACTGGTCTGGAACGTGACCCAACTCATCGGAAAGTGCTGAT
GATCGATCCCCCAGAAAATTTACTCACAGAAATGACGTTCGAGTGTATAC
TCCAGGATGTGTGATCAGCGGGTCCCTAAGGTATATTCGTCATGAGCCTG
GAATGGAGTGGGTATTGGGACGGCCCCTCCGCAACACACTTGTTTCTTGC
CAAGCGCCGTGTTGTGCGAACAGCGCATTGAGTTTAATAGTAAGGCGTGA
TGGAGGCGCGCGGGAGTCCGGAGCAGGGGGAAGTCCCCGTGGCGCATGGG
CGGGGGGGGTTGGTCGGCGGAGGGCACGCGCCGGGGGGTGTGAGGTCTCA
GCGGGGCGGATCGGGGGGGCGACGCTGGGT
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