EY728359

Overview
NameEY728359
Unique NameEY728359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728359 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.274e-17
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 3
Query:   33 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPPRLXEXV 149
            W +AFLCE+CFTF+W+LI N KW+P  YKTYP RL E V
Sbjct:   51 WIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDERV 89          

HSP 2 Score: 40.0466 bits (92), Expect = 5.274e-17
Identity = 19/36 (52.78%), Postives = 23/36 (63.89%), Query Frame = 1
Query:  256 RIQELPPLDIFVKTADVKSEPPIITVKQSCLCWAVN 363
            R+ ELPP+D+FV TAD   EPP+I V       AVN
Sbjct:   88 RVHELPPVDMFVTTADPVREPPLIVVNTVLSLLAVN 123          

HSP 3 Score: 20.7866 bits (42), Expect = 5.274e-17
Identity = 8/23 (34.78%), Postives = 13/23 (56.52%), Query Frame = 2
Query:  455 WGPPF*KYSFKLKPPFKIPQNEP 523
            W P   KY+ +++ PF   +N P
Sbjct:  156 WVPFCKKYNVRVRAPFMYFRNSP 178          
BLAST of EY728359 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.551e-13
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 3
Query:   33 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPPRLXEXV 149
            W +AFLCES F+FIW+LI + KW+P +YK+YP RL E V
Sbjct:   51 WVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDERV 89          

HSP 2 Score: 34.2686 bits (77), Expect = 1.551e-13
Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 1
Query:  256 RIQELPPLDIFVKTADVKSEPPIITVKQSCLCWAVN 363
            R+ +LP +D+FV TAD   EPPI+         AVN
Sbjct:   88 RVHDLPSVDMFVTTADPVREPPILVANTLLSLLAVN 123          

HSP 3 Score: 21.9422 bits (45), Expect = 1.551e-13
Identity = 9/23 (39.13%), Postives = 13/23 (56.52%), Query Frame = 2
Query:  455 WGPPF*KYSFKLKPPFKIPQNEP 523
            W P   KY+ K++ PF+   N P
Sbjct:  156 WVPFCKKYNIKVRAPFRYFLNPP 178          
BLAST of EY728359 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.073e-12
Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 3
Query:   24 GFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPPRLXEXV 149
            G  W +AFLCESCF+F+W+L    KW+P   K YP RL E V
Sbjct:   48 GIIWLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDERV 89          

HSP 2 Score: 35.039 bits (79), Expect = 3.073e-12
Identity = 17/36 (47.22%), Postives = 22/36 (61.11%), Query Frame = 1
Query:  256 RIQELPPLDIFVKTADVKSEPPIITVKQSCLCWAVN 363
            R+ +LP +D+FV TAD   EPPI+ V       AVN
Sbjct:   88 RVYDLPSVDMFVPTADPVREPPIMVVNTVLSLLAVN 123          
BLAST of EY728359 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 3.990e-12
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 3
Query:   33 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPPRLXEXV 149
            W +AFLCESCF+F+W++I   KW+P   K YP RL E V
Sbjct:   51 WLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDERV 89          

HSP 2 Score: 36.5798 bits (83), Expect = 3.990e-12
Identity = 18/36 (50.00%), Postives = 22/36 (61.11%), Query Frame = 1
Query:  256 RIQELPPLDIFVKTADVKSEPPIITVKQSCLCWAVN 363
            R+ +LP +D+FV TAD   EPPII V       AVN
Sbjct:   88 RVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVN 123          
The following BLAST results are available for this feature:
BLAST of EY728359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CSLB4_ARATH5.274e-1766.67Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB3_ARATH1.551e-1361.54Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB2_ARATH3.073e-1254.76Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLB6_ARATH3.990e-1256.41Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-F11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728359 ID=EY728359; Name=EY728359; organism=Citrus sinensis; type=EST; length=814bp
CACGCGTCCGCGGACGCGTGGGTGGATTTGCTTGGTTTCTTGCTTTTCTA
TGTGAGTCTTGTTTTACTTTCATCTGGATTCTCATCGTCAACTGCAAGTG
GACTCCTTTGACCTACAAAACATATCCCCCACGTCTCCNAGAAANGGTGA
CAATCAAATAACGTTAGCATTAATAANTTCCGCATCATTTGCAATTGTCT
TTGTCATTTTTGCAGTTACTACCCACCCCCCCCACACACATGTGTACGAC
TCAACAGGATTCAGGAGCTGCCCCCATTGGACATTTTTGTGAAAACTGCT
GATGTTAAATCCGAACCGCCAATCATCACTGTAAAACAAAGCTGTCTTTG
TTGGGCGGTGAATAATACCATTACAAAACCCCCTGGCAAGTTTCCAAGAA
AACCCGGCCCCCCCCAATATTAATCCCCTGTTGAAACTCAAAAACCCCCA
ACCTTGGGGTCCCCCTTTTTAAAAATATAGTTTCAAATTAAAACCCCCCT
TTAAAATTCCCCAAAATGAGCCCCCCATCCCCTTCTGGGGAAGACCCCCC
GCCTGGGGAAATTTTAGGGGGGGAAAGTGTTTTTCCCTCAAAAAGGGGGA
TATTCCCCCCAATTTAGGTGTTTTTTTGAAAAAAAGGGGGGCCCCCCCAA
AAAAACACCCTTTTTTTTTTTTTTTCAAAAAAAGCGGGCGTCCCCCCTTT
CTTAAAAAGGGGGCCCAAAATTTTTACTCCACATTTTTCCCAACCCCCAA
ATTTGTTCCCCCTTTTTTTGTTTTTTGGGCCCCAAAAAAAAAAAAATGTG
TTTTTTCCCCCCCA
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