EY728355

Overview
NameEY728355
Unique NameEY728355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: AP2_ARATH (Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana GN=AP2 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.145e-48
Identity = 93/109 (85.32%), Postives = 98/109 (89.91%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHG-----VDHNLD 460
            QM+NLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYD+AA+KCNGKDAVTNFDPS+Y +EL A   G      DHNLD
Sbjct:  197 QMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSIYDEELNAESSGNPTTPQDHNLD 305          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: TOE3_ARATH (AP2-like ethylene-responsive transcription factor TOE3 OS=Arabidopsis thaliana GN=TOE3 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.448e-43
Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHGV--DHNL 457
            QM NLTKEEF+HVLRRQSTGFPRGSSKYRGVTLHKCGRWE+R+GQFL KKYVYLGLFDTE+EAARAYD+AA+KCNGKDAVTNFDP +Y++E   S       HNL
Sbjct:  162 QMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEEEDLSSETTRNGHNL 266          

HSP 2 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 2
Query:  194 RQSTGFPRG-SSKYRGVTLHK-CGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGH 439
            ++S   PR  SS+YRGVT ++  GRWE+ +      K VYLG FDT   AARAYDRAA+K  G DA  NFD   Y D+LK  G+
Sbjct:   84 KKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC--GKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGN 165          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: RAP27_ARATH (Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana GN=RAP2-7 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.316e-28
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHG--VDHNL 457
            Q+ NL+KEEFVH+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK               AYD+AA+  NG++AVTNF+ S YQ+E+ +  +   +D NL
Sbjct:  219 QVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK---------------AYDKAAINTNGREAVTNFEMSSYQNEINSESNNSEIDLNL 308          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana GN=WRI1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.471e-24
Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKC-GRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASG 436
            +M  +TKEE++  LRRQS+GF RG SKYRGV  H   GRWEAR+G+  G KY+YLG ++T+ EAA AYD AA++  G +AVTNFD S Y D LK  G
Sbjct:  141 EMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKG 237          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: AIL5_ARATH (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana GN=AIL5 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKAS 433
            +M ++T++EFV  LRR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F T+ EAA AYD AA+K  G +AVTNFD S Y  +  AS
Sbjct:  279 EMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIAS 374          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 412
            +M N+T++EFV  +RR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F TE EAA AYD AA+K  G +AVTNF+ + Y
Sbjct:  266 EMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRY 354          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana GN=AIL7 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.010e-20
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDE 421
            +M+++TK+EF+  LRR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F TE EAA AYD AA+K  G +AVTNF+ + Y  E
Sbjct:  249 EMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIE 340          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20
Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 412
            +M ++T++EFV  +RR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F TE EAA AYD AA+K  G +AVTNF+ + Y
Sbjct:  257 EMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRY 345          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana GN=AIL6 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20
Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDE 421
            +M ++TK+EF+  LRR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F TE EAA AYD AA+K  G +AVTNF+ + Y  E
Sbjct:  341 EMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVE 432          
BLAST of EY728355 vs. ExPASy Swiss-Prot
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20
Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 2
Query:  149 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 412
            +++N+ ++EFV +LRR S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F T+ EAA AYD AA+K  G +AVTNFD + Y
Sbjct:  299 ELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRY 387          
The following BLAST results are available for this feature:
BLAST of EY728355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AP2_ARATH1.145e-4885.32Floral homeotic protein APETALA 2 OS=Arabidopsis t... [more]
TOE3_ARATH1.448e-4379.05AP2-like ethylene-responsive transcription factor ... [more]
RAP27_ARATH1.316e-2860.95Ethylene-responsive transcription factor RAP2-7 OS... [more]
WRI1_ARATH7.471e-2457.73Ethylene-responsive transcription factor WRI1 OS=A... [more]
AIL5_ARATH3.470e-2155.21AP2-like ethylene-responsive transcription factor ... [more]
PLET2_ARATH5.919e-2156.18AP2-like ethylene-responsive transcription factor ... [more]
AIL7_ARATH1.010e-2055.43AP2-like ethylene-responsive transcription factor ... [more]
PLET1_ARATH1.319e-2055.06AP2-like ethylene-responsive transcription factor ... [more]
AIL6_ARATH1.319e-2055.43AP2-like ethylene-responsive transcription factor ... [more]
AIL1_ARATH1.319e-2055.06AP2-like ethylene-responsive transcription factor ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728355 ID=EY728355; Name=EY728355; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGCTTCTACAGTCCAGCTAGAACTAATTGTTGAACATATGC
TTTTGTTTTTGTTATTTTTTTCTTTTTTATATATTATGATACATAAGGAA
AGCCTATGGGTTTACATATGGAAAGATTCTCGTAATGTTGTATGATAACA
GATGAGCAACTTAACCAAGGAAGAGTTTGTACATGTACTTCGCCGACAAA
GCACCGGTTTCCCCAGAGGAAGCTCCAAATATAGAGGAGTTACTTTGCAC
AAATGTGGAAGATGGGAAGCTCGAATGGGCCAATTTTTAGGCAAAAAATA
CGTTTATTTGGGCTTGTTCGATACTGAGGTCGAAGCTGCAAGGGCATATG
ATAGAGCTGCAGTTAAGTGTAATGGCAAAGATGCTGTTACTAATTTTGAT
CCCAGCTTATATCAAGATGAGCTTAAAGCCTCTGGTCATGGTGTAGACCA
CAATCTAGATTTGAGTTTGGGCAGTTCAGCTTCTAATCAGCAAAGCAGTG
CGGACTTTGCTAATAGAATGCAATATACTGTAATGGAACGGCCTGCTCCG
GCATCATTGCCCAATGAAGTTGACTGGCACAACCGGGGTTATAGGCCTAA
GGTTTAATCACTCAACACTCTTCATTATTAGTATTATGATTATTATTTGG
CAGCTTTATTCTAAGTAATTCTAACACATTGATGATTAATTTAAATTTAG
CAGCAGCAAGAACCGTACAGTAGGCAGCATGATCTACCGTACAAGAAAGA
TGGGTATAGTGAGGCTGAAACTATGCCACTTCTCAGCCCAACCCATCTTC
AGTCCCCAGCTTCATCATCGCTCAATAANTCCAGTGGAGATGCCAGATAT
GAGCCATCCGGGAGATCTGGTGAATCCCATTTG
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