EY728340

Overview
NameEY728340
Unique NameEY728340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 9.278e-92
Identity = 136/164 (82.93%), Postives = 151/164 (92.07%), Query Frame = 1
Query:   25 RSRNQSPLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLXGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGG 516
            R+R Q PLLPGLPDDLA+ACLIRVPR EH KLRLVCKRW+RL SGNF+YS RK LG++EEW+YV KRDR+GKISW+ FDPI QLWQPLPP+P+EYSEA+GFGCAVL GCHLYLFGGKDPL+GSMRRVIFY+ARTNKWHRAPDMLR+RH FG CVINNCLYVAGG
Sbjct:   71 RTRIQPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGG 234          

HSP 2 Score: 55.0694 bits (131), Expect = 9.278e-92
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 2
Query:  515 GENGGVHRSLRSAEVYDPQQNKWVFISDINTXMVPFMEVV 634
            GE  G+ R+LRSAEVYDP +N+W FI+D++T MVP + VV
Sbjct:  234 GECEGIQRTLRSAEVYDPNKNRWSFIADMSTAMVPLIGVV 273          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: FBK8_ARATH (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 65/194 (33.51%), Postives = 92/194 (47.42%), Query Frame = 1
Query:   46 LLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIP-----------------------------------KEYSEALGF-GCAV-LXGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGG 516
            L+P LPD+L+I  L R+PR+ +  +RLV +RW   +S +  YSLRK LG  EEW+YV+ +  E K+ W+A DP+   WQ LPP+P                                   ++ SE + F GCA+      LY+ GG    K ++  V  +    N W     ML  R    + V+N  LYV GG
Sbjct:   43 LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTKGHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRSK-TVSCVWRFDPILNSWSEVSSMLASRAYSKTGVLNKKLYVVGG 235          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.690e-18
Identity = 57/170 (33.53%), Postives = 83/170 (48.82%), Query Frame = 1
Query:   43 PLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDREGKIS-WHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLXGCHLYLFGGKDPLKGSM---RRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGGGEWRGASV 540
            PL+PGLPDD+A  CL  VPR     +  VCK+W  ++    + ++R+  G+ EEW+YV+  +  GK + W   D + Q    LPP+P       GF   V+ G  L +  G   + GS+     V  Y    N W R  D+   R+ F    +N  +YV GG    G S+
Sbjct:   38 PLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTMNAGGKDNRWEVMDCLGQKLSSLPPMPG--PAKTGFKVVVVDG-KLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESL 204          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: FBK16_ARATH (Putative F-box/kelch-repeat protein At1g27420 OS=Arabidopsis thaliana GN=At1g27420 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.661e-18
Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 1
Query:   34 NQSPLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDREGK-ISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLXGCHLYLFGGKDPLKGS---------MRRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGG 516
            + SP++PGL DD+A  C+ ++PR        VC+RW   L    + ++RK  G  EE++ V+     G+ + W  FD        +PP+P       GFG AVL G  +  FGG   ++GS            V  +    N W +   M   R+ F    +N  LYV  G
Sbjct:    6 SSSPIIPGLTDDVAELCVSKIPRSSFQITSQVCRRWRSFLRSQHFAAVRKLTGTVEEFLCVLMESECGRDVYWEVFDASGNKLGQIPPVPGPLKR--GFGVAVLDGGKIVFFGGYTEVEGSGINSTTVSASADVYEFDPANNSWRKLAGMNIPRYNFAFAEVNGLLYVIRG 174          

HSP 2 Score: 25.409 bits (54), Expect = 8.661e-18
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  539 SLRSAEVYDPQQNKW 583
            SL +AEVY+P+ N+W
Sbjct:  181 SLSNAEVYNPKTNQW 195          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17
Identity = 54/163 (33.13%), Postives = 77/163 (47.24%), Query Frame = 1
Query:   43 PLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLL-SGNFYYSLRKNLGIAEEWIYVIKRDR-EGKISWHAFDPIYQLWQPLPPIP-KEYSEALGFGCAVL--XGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGG 516
            PL+PGLPDD+A+ CL+RVP   H   + VCKRWH L  +   +++ RK  G  + W++V+   R  GKI W   D     W  +P +P ++     GF    +   G      G        +  V+ Y    N W     M+  R  F S VI+  +Y AGG
Sbjct:   52 PLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVVGFSRCTGKIQWKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMPREGTMFVCGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGG 214          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: SKI30_ARATH (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-14
Identity = 51/173 (29.48%), Postives = 70/173 (40.46%), Query Frame = 1
Query:   25 RSRNQSPLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLXGCHLYLFGGKD---PLKG------SMRRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGG 516
            R    S LL G+P+ +A+ CL  VP   H  L LV + W   +  +  + +RK L  +E  + V   D E    W  + P    W  LP +P        FG     G    L GG D   P+ G      +  +V  Y     +W     ML  R  F  CV+   + VAGG
Sbjct:    4 RQETMSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCVCAFDPEN--IWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGDHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGG 174          

HSP 2 Score: 27.335 bits (59), Expect = 1.737e-14
Identity = 9/23 (39.13%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  536 RSLRSAEVYDPQQNKWVFISDIN 604
            +S+  AE+YDP+ + W  I D++
Sbjct:  180 KSISGAEMYDPENDVWTSIPDLH 202          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: SKIP4_ARATH (F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana GN=SKIP4 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 51/173 (29.48%), Postives = 80/173 (46.24%), Query Frame = 1
Query:   16 SGSRSRNQSPLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDREGKISWHAFDPI--YQLWQPL---PPIPKEYSEALGFGCAVLXGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGGG 519
            +G  +  Q  L+ G+PDD++ +CL RVPR  H  ++ V +RW   +  +     R    +AE WIY + RD  G +  H  +P    + W+ +   P IP       G G AVL G  L++ GG   L+ +   +  Y A  N W      L  +  + +C   +   +A GG
Sbjct:   11 AGQSNETQIALISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMCDYRNEFNLAESWIYALCRDISGGVFLHMLNPFSSRRSWKRINDYPYIPMRE----GMGFAVL-GKRLFVLGGCGWLEDATDEIYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGG 178          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: FBK5_ARATH (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.082e-13
Identity = 46/170 (27.06%), Postives = 72/170 (42.35%), Query Frame = 1
Query:   37 QSPLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDREGKISWHAFDPIYQLWQPLP--PIPKEYSEALGFGCAVLXGCHLYLFGGKDPLKGSM--------RRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGG 516
            +  ++PGLPDDLA+ C+ ++    H  L  V + W  L+ G  Y   +   G +  W++V+      K  W A+DP    W PLP     ++     GF C  +  C L + G   P   S         + V+ +     +W     M   R  F    ++  +YVAGG
Sbjct:    5 EQSIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVL--TERSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGG 172          

HSP 2 Score: 25.7942 bits (55), Expect = 1.082e-13
Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  515 GENGGVHRSLRSAEVYDPQQNKW 583
            G N    R + SAEVYDP  ++W
Sbjct:  172 GRNLTHSRGIPSAEVYDPVADRW 194          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana GN=AFR PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 49/174 (28.16%), Postives = 85/174 (48.85%), Query Frame = 1
Query:   10 AASGSRSRNQSPLLPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDRE-GKISWHAFDPIYQLWQPLPPIPKEY---SEALGFGCAVL-XGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGG 516
            A   +R+++Q PL+ GLP+D+A  CL+R+P   H   R V   W++ ++   +   +++L I+  +++V   ++   +I W + D     W  LPP+P  +   S      CA +     L++ GG D      R  + Y+A TN+W     M+  R  F S  +N  +   GG
Sbjct:   17 AEEETRTKSQ-PLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRFLFSKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASMPRQGKLFVLGGGD----VNRSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGG 185          
BLAST of EY728340 vs. ExPASy Swiss-Prot
Match: FBK70_ARATH (F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana GN=At3g27150 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13
Identity = 47/167 (28.14%), Postives = 80/167 (47.90%), Query Frame = 1
Query:   49 LPGLPDDLAIACLIRVPRVEHCKLRLVCKRWHRLLSGNFYYSLRKNLGIAEEWIYVIKRDREGKISWHAFDPIYQLWQPLPPIPKEYSEALGFGCAVLXGCHLYLFGGKDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHXFGSCVINNCLYVAGGGEWRGASVLKI 549
            +P L  +L +  L RVPR E+ KL+L+ K + RLL  +  + +R+  G+ E  ++++     G   W  FD  +   Q LP +P +     G   ++  G HL + G ++      R    Y   T+KW + P M+  R  F S      ++VAGG +  G   +++
Sbjct:   71 VPQLVYELEVEILARVPRFEYWKLKLLNKGFSRLLKSDEIFKVRRERGVVEPSVFMLS---SGDTCWTMFDKGFGNCQKLPELPSDICFLHGDKESLCAGTHLIVTGKEEKSIALWR----YELETSKWFKGPAMITPRILFASATCGTVVFVAGGLKIEGNGTMEV 230          
The following BLAST results are available for this feature:
BLAST of EY728340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
FBK22_ARATH9.278e-9282.93F-box/kelch-repeat protein At1g55270 OS=Arabidopsi... [more]
FBK8_ARATH4.532e-2133.51F-box/kelch-repeat protein At1g22040 OS=Arabidopsi... [more]
FBK28_ARATH4.690e-1833.53F-box/kelch-repeat protein At1g67480 OS=Arabidopsi... [more]
FBK16_ARATH8.661e-1830.41Putative F-box/kelch-repeat protein At1g27420 OS=A... [more]
FBK17_ARATH8.845e-1733.13F-box/kelch-repeat protein At1g30090 OS=Arabidopsi... [more]
SKI30_ARATH1.737e-1429.48F-box/kelch-repeat protein SKIP30 OS=Arabidopsis t... [more]
SKIP4_ARATH2.409e-1429.48F-box/kelch-repeat protein SKIP4 OS=Arabidopsis th... [more]
FBK5_ARATH1.082e-1327.06F-box/kelch-repeat protein At1g16250 OS=Arabidopsi... [more]
AFR_ARATH2.663e-1328.16F-box protein AFR OS=Arabidopsis thaliana GN=AFR P... [more]
FBK70_ARATH4.543e-1328.14F-box/kelch-repeat protein At3g27150 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-E01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728340 ID=EY728340; Name=EY728340; organism=Citrus sinensis; type=EST; length=882bp
CACGCGTCCGCAGCAAGTGGCAGCAGGAGCCGAAACCAATCTCCTTTGCT
TCCAGGACTCCCTGATGATCTTGCTATTGCTTGCCTCATTCGGGTCCCAC
GGGTTGAGCACTGTAAACTCCGTCTGGTATGCAAAAGATGGCACCGTCTT
TTGTCTGGTAACTTCTACTACTCACTCCGGAAGAACCTTGGGATTGCAGA
GGAATGGATATATGTCATTAAGAGAGATCGAGAGGGGAAAATTTCATGGC
ATGCCTTTGACCCCATATACCAGCTCTGGCAGCCACTGCCTCCCATCCCA
AAGGAATATTCTGAAGCCCTTGGGTTTGGTTGTGCTGTTCTTANTGGCTG
TCACTTGTACTTGTTTGGTGGCAAAGACCCTCTAAAAGGTTCAATGAGAC
GAGTTATTTTTTATAGTGCAAGGACTAATAAATGGCACCGTGCCCCAGAC
ATGCTTCGCAGACGACATNTTTTTGGTTCTTGTGTCATAAACAACTGCTT
ATATGTTGCCGGTGGGGGAGAATGGAGGGGTGCATCGGTCCTTAAGATCA
GCTGAAGTTTATGATCCCCAACAGAATAAATGGGTCTTTATTTCAGATAT
AAACACANCAATGGTGCCCTTCATGGAAGTGGTTACCAAGGCAACTGGTT
CTGAAGGGGGTGGGATTTCCACNGCGAGTTCTAGGCGAGGGCTACCCCCG
AAAAAGGACAGGAGGTCCGGGAAACGAATGCTAAGGGGGAGGGTGGAAGG
GACCATGGGGTGAGGTAGGAACATGTCAAGGCTGGGCGTGTTGGGGAGGT
CGAAGGGCGGGGGGAGGAGGAGTGAGCCAGTCAGGGGGGGAGGCTGGTGC
GAATGCGGCGCGGGGGAGCAGGGAAGCGGCGC
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