EY728332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728332 vs. ExPASy Swiss-Prot
Match: SF3A3_MOUSE (Splicing factor 3A subunit 3 OS=Mus musculus GN=Sf3a3 PE=2 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 9.129e-62 Identity = 120/251 (47.81%), Postives = 153/251 (60.96%), Query Frame = 1 Query: 37 GSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEIXIIEEAKELWKKIQERXGGXQWRPKLEEEYEDQEGXIYNKKTYTDLQRQRLI 789 G +RLK L A GLK GGTL++RA+RLF TK L+ LD FAK + K ++ KDIA +EA++ + ++L E + T +NVQ+KQA IYNP LP+GWDGKPIPYWLYKLHGL + CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F + IE+A LW K++ + +W+P EEEYED G + NKKTY DL+RQ L+ Sbjct: 259 GLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK------RDTERNKDIAFLEAQIYEYVEILGEQRQLTHENVQRKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
BLAST of EY728332 vs. ExPASy Swiss-Prot
Match: SF3A3_HUMAN (Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF3A3 PE=1 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.557e-61 Identity = 120/251 (47.81%), Postives = 152/251 (60.56%), Query Frame = 1 Query: 37 GSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEIXIIEEAKELWKKIQERXGGXQWRPKLEEEYEDQEGXIYNKKTYTDLQRQRLI 789 G +RLK L A GLK GGTL++RA+RLF TK L+ LD FAK + K ++ KDIA +EA++ + ++L E T +NVQ+KQA IYNP LP+GWDGKPIPYWLYKLHGL + CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F + IE+A LW K++ + +W+P EEEYED G + NKKTY DL+RQ L+ Sbjct: 259 GLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK------RDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
BLAST of EY728332 vs. ExPASy Swiss-Prot
Match: NOI_DROME (Splicing factor 3A subunit 3 OS=Drosophila melanogaster GN=noi PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55 Identity = 116/251 (46.22%), Postives = 148/251 (58.96%), Query Frame = 1 Query: 37 GSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEIXIIEEAKELWKKIQERXGGXQWRPKLEEEYEDQEGXIYNKKTYTDLQRQRLI 789 G +RLK L A GLK GGTL++RA+RLF TK LD AK K + ++E K+IA +EA + K DLLSE T +NVQ+KQA YNP LP+GWDGKPIPYWLYKLHGL + CEICGN++Y G +AF+RHF EWRH HGMRCLGIPNT +F + IE+A LW+K++ + +W EEE+ED G + N+KT+ DL+RQ L+ Sbjct: 259 GLDRLKSALVALGLKCGGTLEERAQRLFSTKGK--STLDPALMAKKPSAKTASA---QSREHERHKEIAQLEALLYKYADLLSEQRAATKENVQRKQARTGGERDDSDVEASESDNEDDPDADDVP-YNPKNLPLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503
BLAST of EY728332 vs. ExPASy Swiss-Prot
Match: SAP61_SCHPO (CWF complex protein sap61 OS=Schizosaccharomyces pombe GN=sap61 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.192e-38 Identity = 89/231 (38.53%), Postives = 121/231 (52.38%), Query Frame = 1 Query: 154 KKHFAKGARGKEQNGVAPATQEVGNLKD-----IALMEAKMKKLCDLLSETIERTIQNVQKKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQ--------------IYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEIXIIEEAKELWKKIQERXGGXQWRPKLEEEYEDQEGXIYNKKTYTDLQRQRLI 789 KK A K +P+T N K IA +E +KKL LL + + T +NV ++Q L + IYNPLKLP+GWDGKPIP+WL+KLHGLG+EF CEICGNY Y GR+AF++HF E RH +G++CLGI + FN+I I+EA +LW+K + + E ED EG + ++K Y DL+ Q L+ Sbjct: 262 KKSKAHNKAVKRMQSSSPSTTSNTNEKQKGPKAIARIEFLIKKLTSLLDDVRKDTRENVVRRQTLTAAERLAEVEAAEREAFEQSTPSVSVEGNQDEESDQDDEEKIYNPLKLPLGWDGKPIPFWLWKLHGLGKEFPCEICGNYVYMGRKAFDKHFTEQRHIYGLKCLGISPSPLFNQITSIDEALQLWQKYKVDSKKRETTMASLNEMEDDEGNVMSEKVYNDLKAQGLL 492
BLAST of EY728332 vs. ExPASy Swiss-Prot
Match: PRP9_YEAST (Pre-mRNA-splicing factor PRP9 OS=Saccharomyces cerevisiae GN=PRP9 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.280e-27 Identity = 61/133 (45.86%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 433 LPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEIXIIEEAKELWKKIQ--------------ERXGGXQWRPKLEEEYEDQEGXIYNKKTYTDLQRQRLI 789 +P+G DG P+PYWLYKLHGL +E++CEIC N Y GRR FERHF E RH + +RCLGI + F I I+EA+ELWK +Q + +LE E ED+EG + +KK Y +L++Q L+ Sbjct: 398 MPLGPDGLPMPYWLYKLHGLDREYRCEICSNKVYNGRRTFERHFNEERHIYHLRCLGIEPSSVFKGITKIKEAQELWKNMQGQSQLTSIAAVPPKPNPSQLKVPTELELEEEDEEGNVMSKKVYDELKKQGLV 530 The following BLAST results are available for this feature:
BLAST of EY728332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728332 ID=EY728332; Name=EY728332; organism=Citrus sinensis; type=EST; length=890bpback to top |