EY728325

Overview
NameEY728325
Unique NameEY728325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2829 contig Csv1_Contig2829:353..1136. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 3.020e-66
Identity = 115/176 (65.34%), Postives = 141/176 (80.11%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            MN +Y S +I+K++EN Y++  G+VT+KLAEA+GFCWGVERAV +AYE R+ FP EKIWIT+EI+H+PS+N+RL EM V  I V  G K F VV  GDVV+LPAFGA+V EM  LNDK   IVDTTCP VSKVW +VEKHKK DYTSIIHGKY HEET+AT+SFAG Y++  ++KE
Sbjct:   31 MNTEYQSSLIQKIRENNYQWQEGDVTIKLAEAFGFCWGVERAVAMAYETRQHFPQEKIWITNEIIHNPSVNQRLLEMNVGFIEVINGSKDFSVVEAGDVVILPAFGASVTEMQLLNDKGCTIVDTTCPWVSKVWNSVEKHKKKDYTSIIHGKYKHEETVATSSFAGTYLVVLNLKE 206          

HSP 2 Score: 27.335 bits (59), Expect = 3.020e-66
Identity = 17/43 (39.53%), Postives = 21/43 (48.84%), Query Frame = 3
Query:  648 LIQAEYVCDYILGGELYGSTLTKEASLRNSRNPFKR-VDPDVD 773
            L +A+YVCDYIL G        K+  L   +N      DPD D
Sbjct:  204 LKEAQYVCDYILNGG------NKDEFLEKFKNAHSEGFDPDKD 240          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.110e-64
Identity = 112/181 (61.88%), Postives = 146/181 (80.66%), Query Frame = 1
Query:    7 VRELMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEE-GKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            V E++  +Y S +I++++ENG  +  G VT++LAEA+GFCWGVERAV +AYE R+ FP E+IWIT+EI+H+PS+N+ L EM+V+ IPV+E G+K F VV   DVV+LPAFGA+V+EM  LNDK  +I+DTTCP VSKVW +VEKHKKG YTSIIHGKY HEETIAT+S+A  Y+I  D+KE
Sbjct:   27 VTEMLRFEYQSSLIQQIRENGNRFQRGEVTIQLAEAFGFCWGVERAVALAYETRQHFPTERIWITNEIIHNPSVNQNLREMQVEFIPVDEQGQKDFSVVAGEDVVILPAFGASVQEMQLLNDKGCKIMDTTCPWVSKVWNSVEKHKKGSYTSIIHGKYQHEETIATSSYAATYLIVLDLKE 207          

HSP 2 Score: 27.335 bits (59), Expect = 2.110e-64
Identity = 17/43 (39.53%), Postives = 22/43 (51.16%), Query Frame = 3
Query:  648 LIQAEYVCDYILGGELYGSTLTKEASLRNSRNPFKRVDPDVDP 776
            L +AEYVC+YIL G        +E  L   R+ +    PD DP
Sbjct:  205 LKEAEYVCNYILNGG------DREEFLHKFRHAY---SPDFDP 238          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.679e-64
Identity = 110/176 (62.50%), Postives = 144/176 (81.82%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            +  +Y S +I+++++  Y    G+VT++LA+A+GFCWGVERAV +AYE RK FP E+IWIT+EI+H+PS+N+R++EM+V  IPVE G K F VV   DVV+LPAFGA+V+EM  L++K  +IVDTTCP VSKVW TVEKHKKGD+TSIIHGKY HEETIAT+SFAGKY+I  ++KE
Sbjct:   31 LQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWITNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFGASVQEMQLLSEKGCKIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSFAGKYLIVLNLKE 206          

HSP 2 Score: 22.7126 bits (47), Expect = 4.679e-64
Identity = 16/42 (38.10%), Postives = 20/42 (47.62%), Query Frame = 3
Query:  648 LIQAEYVCDYILGGELYGSTLTKEASLRNSRNPFKRVDPDVD 773
            L +A+YV DYIL G      L K A   ++       DPD D
Sbjct:  204 LKEAQYVADYILHGRNREEFLQKFAKACSA-----GFDPDKD 240          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.679e-64
Identity = 105/177 (59.32%), Postives = 141/177 (79.66%), Query Frame = 1
Query:   16 LMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            +MN +Y S +I+++++N Y++  GNVT+ LA+A+GFCWGVERAV +AYE R+ FP E IWIT+E++H PS+N+RLE+ME+K I V  G+K F  +  GDVV+LPAFGA+V EM  LND+   IVDTTCP VSKVW +VEKHKK  YTSIIHGKY HEET+AT+SFAG Y++  ++++
Sbjct:   30 VMNTEYQSSLIQQIRQNNYQWKQGNVTIHLAQAFGFCWGVERAVAMAYETRQHFPKESIWITNELIHHPSVNQRLEQMEIKFIEVINGQKDFSQIKSGDVVILPAFGASVSEMQLLNDRGCTIVDTTCPWVSKVWNSVEKHKKRHYTSIIHGKYRHEETVATSSFAGTYLVVLNLEQ 206          

HSP 2 Score: 29.6462 bits (65), Expect = 4.679e-64
Identity = 19/43 (44.19%), Postives = 21/43 (48.84%), Query Frame = 3
Query:  648 LIQAEYVCDYILGGELYGSTLTKEASLRNSRNPFKR-VDPDVD 773
            L QA YVCDYIL G        KE  L   +N +    DPD D
Sbjct:  204 LEQATYVCDYILKGG------NKEEFLAKFKNAYSEGFDPDTD 240          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.083e-64
Identity = 110/176 (62.50%), Postives = 144/176 (81.82%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            +  +Y S +I+++++  Y    G+VT++LA+A+GFCWGVERAV +AYE RK FP E+IWIT+EI+H+PS+N+R++EM+V  IPVE G K F VV   DVV+LPAFGA+V+EM  L++K  +IVDTTCP VSKVW TVEKHKKGD+TSIIHGKY HEETIAT+SFAGKY+I  ++KE
Sbjct:   31 LQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWITNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFGASVQEMQLLSEKGCKIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSFAGKYLIVLNLKE 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 7.956e-64
Identity = 106/176 (60.23%), Postives = 142/176 (80.68%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            +   Y SD+I+ L++NGY    G +T++LAEA+GFCWGVERAV IAYE R+ FP E+IWIT+EI+H+PS+N+ L EM V+ IP E G+K F VV++GDVV+LPAFGA+V+EM  L++K   IVDTTCP VSKVW TVEKHK+G +TSIIHGKY+HEET+AT+SFA  Y++  ++++
Sbjct:   31 LESAYQSDLIQSLRQNGYRLQRGEITIRLAEAFGFCWGVERAVAIAYETRQHFPQERIWITNEIIHNPSVNQHLREMSVEFIPCERGEKDFSVVDRGDVVILPAFGASVQEMQLLDEKGCHIVDTTCPWVSKVWNTVEKHKRGAHTSIIHGKYNHEETVATSSFAETYLVVLNLEQ 206          

HSP 2 Score: 27.335 bits (59), Expect = 7.956e-64
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  648 LIQAEYVCDYILGG 689
            L QA+YVCDYIL G
Sbjct:  204 LEQAQYVCDYILNG 217          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 7.956e-64
Identity = 106/176 (60.23%), Postives = 142/176 (80.68%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            +   Y SD+I+ L++NGY    G +T++LAEA+GFCWGVERAV IAYE R+ FP E+IWIT+EI+H+PS+N+ L EM V+ IP E G+K F VV++GDVV+LPAFGA+V+EM  L++K   IVDTTCP VSKVW TVEKHK+G +TSIIHGKY+HEET+AT+SFA  Y++  ++++
Sbjct:   31 LESAYQSDLIQSLRQNGYRLQRGEITIRLAEAFGFCWGVERAVAIAYETRQHFPQERIWITNEIIHNPSVNQHLREMSVEFIPCERGEKDFSVVDRGDVVILPAFGASVQEMQLLDEKGCHIVDTTCPWVSKVWNTVEKHKRGAHTSIIHGKYNHEETVATSSFAETYLVVLNLEQ 206          

HSP 2 Score: 27.335 bits (59), Expect = 7.956e-64
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  648 LIQAEYVCDYILGG 689
            L QA+YVCDYIL G
Sbjct:  204 LEQAQYVCDYILNG 217          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_MICAN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=ispH PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.355e-63
Identity = 112/180 (62.22%), Postives = 142/180 (78.89%), Query Frame = 1
Query:    7 VRELMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            V + M  +Y SD+I++++EN Y    G+VT+ LA+A+GFCWGVERAV +AYE R+ FP E+IWIT+EI+H+PS+N+RL  M V  IPVE G+K F VV  GDVV+LPAFGA+V EM  LNDK   IVDTTCP VSKVW +VEKHKK D+TSIIHGKY+HEETIAT+SFAG Y+I  ++ +
Sbjct:   27 VMDAMTNEYQSDLIQEIRENNYRLQRGDVTIYLAQAFGFCWGVERAVAMAYETRQHFPQERIWITNEIIHNPSVNQRLRSMAVGFIPVENGQKDFTVVESGDVVILPAFGASVSEMQILNDKGCMIVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLDQ 206          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.311e-63
Identity = 110/181 (60.77%), Postives = 147/181 (81.22%), Query Frame = 1
Query:    7 VRELMNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVE-EGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            V  L+  +Y S +I++++ NGY    G+VT+ LAEA+GFCWGVERA+ +AYE R+QFP E+IWIT+EI+H+PS+NK L +M+V+ IPV+ +G+K F VV + DVV+LPAFGA+V+EM  L+DK   I+DTTCP VSKVWT+VEKHKKG YTSIIHGKY HEETIAT+SFAG Y++  +++E
Sbjct:   27 VTNLLQSEYNSKLIQQIRNNGYRLQQGDVTIHLAEAFGFCWGVERAIALAYETRRQFPQERIWITNEIIHNPSVNKNLRDMKVEFIPVQPDGQKDFTVVGQNDVVILPAFGASVQEMQLLHDKGCTIMDTTCPWVSKVWTSVEKHKKGSYTSIIHGKYKHEETIATSSFAGTYLVLLNLEE 207          
BLAST of EY728325 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 6.648e-63
Identity = 108/176 (61.36%), Postives = 144/176 (81.82%), Query Frame = 1
Query:   19 MNQQYASDIIKKLKENGYEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDEKIWITSEILHSPSINKRLEEMEVKIIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNDKNVQIVDTTCP*VSKVWTTVEKHKKGDYTSIIHGKYSHEETIATASFAGKYIIXKDMKE 546
            +  +Y S++I+++++  Y    G+VT++LA+A+GFCWGVERAV +AYE R+ FP E IWIT+EI+H+PS+N+R++EMEV+ IP+E   K F VV  GDVV+LPAFGA+V+EM  L+DK  +IVDTTCP VSKVW TVEKHKK DYTSIIHGKY HEET+AT+SFAGKY+I  +++E
Sbjct:   31 LQSEYQSNLIQEIRDRNYILQRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPTEHIWITNEIIHNPSVNQRMQEMEVEFIPIEGKNKDFSVVGTGDVVILPAFGASVQEMQILHDKGCKIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSFAGKYLIVLNLQE 206          

HSP 2 Score: 23.8682 bits (50), Expect = 6.648e-63
Identity = 16/42 (38.10%), Postives = 21/42 (50.00%), Query Frame = 3
Query:  648 LIQAEYVCDYILGGELYGSTLTKEASLRNSRNPFKRVDPDVD 773
            L +A+YV DYI+ G      LTK A   ++       DPD D
Sbjct:  204 LQEAQYVADYIINGGNREEFLTKFAKACSA-----GFDPDRD 240          
The following BLAST results are available for this feature:
BLAST of EY728325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ISPH_CYAA53.020e-6665.344-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP42.110e-6461.884-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANAVT4.679e-6462.504-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP84.679e-6459.324-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANASP6.083e-6462.504-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNP67.956e-6460.234-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNE77.956e-6460.234-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_MICAN1.355e-6362.224-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ACAM12.311e-6360.774-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_NOSP76.648e-6361.364-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728325 ID=EY728325; Name=EY728325; organism=Citrus sinensis; type=EST; length=784bp
CCACGCGTCCGAGAGCTCATGAATCAACAGTACGCAAGTGATATTATAAA
GAAATTGAAGGAGAATGGATACGAGTATACGTGGGGAAATGTTACGGTGA
AGCTGGCCGAAGCATATGGCTTTTGCTGGGGAGTTGAGCGTGCTGTGCAG
ATTGCTTATGAAGCAAGAAAACAGTTTCCCGATGAGAAGATCTGGATTAC
CAGTGAAATCCTTCACAGTCCATCTATCAACAAGCGGTTGGAGGAGATGG
AAGTTAAAATTATACCTGTTGAGGAAGGAAAGAAGCAATTTGATGTGGTA
AATAAGGGTGATGTTGTGGTTTTGCCTGCATTTGGGGCTGCAGTTGAAGA
AATGGTGACTCTGAATGACAAGAATGTACAGATCGTTGATACAACTTGCC
CTTGAGTGTCGAAGGTCTGGACTACTGTTGAGAAGCACAAGAAGGGAGAC
TATACTTCAATTATTCACGGTAAATATTCTCATGAGGAAACTATAGCAAC
TGCATCTTTTGCAGGAAAGTATATCATANTCAAGGATATGAAAGAGGTAT
GTTCGGAAGGTGGATTATATTATATTTTCTGGAGAATCTGTANAAGCATA
TTAGGAGATATTCATTAGAATGTTTTTTTCTTTTCAATTGTTATTATTTA
ATCCAGGCTGAGTACGTGTGTGATTACATTCTGGGGGGTGAACTTTATGG
ATCTACCCTTACAAAAGAAGCCTCCTTGAGGAATTCCAGAAACCCGTTCA
AAAGGGTTGATCCAGATGTTGACCCGGCACAGTT
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