EY728308

Overview
NameEY728308
Unique NameEY728308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.116e-58
Identity = 120/178 (67.42%), Postives = 130/178 (73.03%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTNXI 546
            ANAASGMAV DDCKLKFLELKAKRTYRFI++KIEEKQK+VVVEKLGEP++SYE+FTA LPADECRYAVYDFDF+T EN QKS+I FIAW                                      SPDT++VRSKMIYASSKDRFKRELDGIQV LQATDPTEMGLDV RSR   I
Sbjct:    2 ANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRYAVYDFDFMTKENHQKSRIFFIAW--------------------------------------SPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRAGGI 141          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.891e-57
Identity = 116/176 (65.91%), Postives = 129/176 (73.30%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            ANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+GEP++SYE+F ASLP +ECRYAVYDFDFVT ENCQKS+I FIAW                                       PDT++VRSKMIYASSKDRFKRELDGIQV LQA DPTEMGLDV++SR N
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAW--------------------------------------CPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.981e-56
Identity = 116/176 (65.91%), Postives = 127/176 (72.16%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            ANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YE+F ASLPADECRYA+YDFDFVT ENCQKSKI FIAW                                       PD +KVRSKMIYASSKDRFKRELDGIQV LQATDPTEM LDV++SR N
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAW--------------------------------------CPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.587e-56
Identity = 113/176 (64.20%), Postives = 130/176 (73.86%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            ANAASGMAVDD+CKLKFLELKAKRTYRFI++KI+EK+K VVVEK+GEP  +Y++F ASLPA+ECRYA++D+DFVT+ENCQKSKI FIAW                                      SPDTS+VRSKMIYASSKDRFKRELDGIQV LQATDPTE+GLDV+R R N
Sbjct:    2 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAW--------------------------------------SPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.763e-56
Identity = 116/176 (65.91%), Postives = 124/176 (70.45%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            ANAASGMAV DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+G+P  +YE F A LPADECRYA+YDFDFVT ENCQKSKI FIAW                                       PD +KVRSKMIYASSKDRFKRELDGIQV LQATDPTEM LDV RSR N
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAW--------------------------------------CPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.322e-55
Identity = 114/176 (64.77%), Postives = 125/176 (71.02%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            ANAASGMAV DDCKLKF+ELKAKRT+R IV+KIE+KQ  V+VEKLGEP  SY++F ASLPAD+CRY +YDFDFVT ENCQKSKI FIAW                                      SPDT+KVR KMIYASSKDRFKRELDGIQV LQATDPTEMGLDV +SRTN
Sbjct:    2 ANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAW--------------------------------------SPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.496e-53
Identity = 106/174 (60.92%), Postives = 128/174 (73.56%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSR 534
            +N+ASGMAV D+CKLKFLELKAKR++RFIVFKI EK +QVVV++LG+P +SY++FTA LPADECRYAV+DFDFVTDENCQKSKI FI+W                                      +PDTS+VRSKM+YASSKDRFKRELDGIQV LQATDP+EM +D+++SR
Sbjct:    2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISW--------------------------------------APDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSR 137          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.017e-52
Identity = 105/176 (59.66%), Postives = 123/176 (69.89%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            AN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++KLG P ++YE+FT S+P DECRYAVYD+DF T ENCQKSKI FIAW                                      SPDTS+VRSKM+YASSKDRFKRELDGIQV LQATDP+EM LD+++ R N
Sbjct:    2 ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAW--------------------------------------SPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.735e-52
Identity = 103/176 (58.52%), Postives = 126/176 (71.59%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            AN+ASGM V+D+CK+KFLELKAKRTYRFIVFKI+EK +QV +EKLG P ++Y++FT+S+P DECRYAVYDFDF T++NCQKSKI FIAW                                      SPDTS+VRSKM+YASSKDRFKRE++GIQV LQATDP+EM LD+++ R N
Sbjct:    2 ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAW--------------------------------------SPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.266e-52
Identity = 103/174 (59.20%), Postives = 127/174 (72.99%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSR 534
            AN++SGMAVDD+CKLKF+ELKAKR +RFIVFKIEEK +QV VE+LG+P++SY++FT  LP +ECRYAV+DFDFVTDENCQKSKI FI+W                                      SPDTS+VRSKM+YAS+KDRFKRELDGIQV LQATDP+EM +D++++R
Sbjct:    2 ANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISW--------------------------------------SPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKAR 137          
The following BLAST results are available for this feature:
BLAST of EY728308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ADF2_PETHY2.116e-5867.42Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF1_PETHY8.891e-5765.91Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF4_ARATH1.981e-5665.91Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF7_ORYSJ2.587e-5664.20Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF1_ARATH5.763e-5665.91Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF2_ARATH8.322e-5564.77Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF1_ORYSJ3.496e-5360.92Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]
ADF10_ARATH1.017e-5259.66Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]
ADF8_ARATH1.735e-5258.52Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF_LILLO2.266e-5259.20Actin-depolymerizing factor OS=Lilium longiflorum ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-B02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728308 ID=EY728308; Name=EY728308; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGGCAAATGCAGCATCTGGAATGGCAGTCGACGATGACTG
CAAGCTGAAGTTTTTGGAATTGAAGGCAAAAAGGACTTACCGCTTCATAG
TTTTCAAGATTGAAGAGAAGCAGAAGCAGGTTGTTGTGGAGAAGCTTGGT
GAACCATCTGATAGTTATGAGAATTTCACTGCTAGCCTCCCAGCGGATGA
GTGCCGATACGCTGTCTACGATTTTGACTTTGTGACTGATGAGAACTGCC
AGAAGAGCAAGATTATTTTCATTGCATGGTAATTGGTCAATGATAAAGGA
TTTATTTTCGATTCTTCGATCCTTTTGTTTGTTTCCATCACAATTTTGCC
TTAATATTTCATACTAATAAATTTGTTGATTTACATATCAAGGTCCCCCG
ACACCTCAAAGGTGAGAAGCAAGATGATTTATGCTAGCTCCAAGGACAGG
TTCAAGAGAGAATTGGATGGAATTCAGGTANAGTTGCAGGCTACTGATCC
TACTGAGATGGGTCTTGATGTCATGAGAAGCCGCACAAATTANATTTTAG
ACTTGCCTATGGGTGCATGGAAAGCCCATACTATATTGTCCACTTAGATG
TAATGTCTATATCTTTGATGACTTATGACTTGGCTTGCTATCAGCCTGTG
GTCGGGAGTGAATAACTTTTTGAAGTGGCCGCGCCTTTGGTGATATCTGG
GGGTTAATAGGGGGAGGGTCCCCCGTGGTGTGGGTGCGGTGCCGAGCTAG
CATTAATGGTTGGTGGGGGGTCGGTCTCCGCGTTGGCCCGGGTGTCGGGC
GACGGGGGTGGTGGGCGGGGTGGCGGGGTGACCCGGCGGTTGTGCGTGTG
CGGCGGAGGCTCGGAAGAGGGGGGGGGCGGTGGGGGACATCGC
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