EY728298

Overview
NameEY728298
Unique NameEY728298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728298 vs. ExPASy Swiss-Prot
Match: OTUD3_HUMAN (OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.988e-31
Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 1
Query:   25 GKQADVSKFRTQLDILGLKIIQVTADGNCFFRALADQLEGNEEEHQKYRSMVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYNSVRLKEDS 459
            G + +   F  QL  LGLK+ +V  DGNC FRAL DQLEG+   H K+R   V Y++K RE FEPF+EDD+PF+++  S+   GT+AG+  + A +     N+ IH+  +P W IR  +    R +H++Y  GEHY+SVR   D+
Sbjct:   48 GCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDN 192          
BLAST of EY728298 vs. ExPASy Swiss-Prot
Match: OTUD4_HUMAN (OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 1
Query:   25 GKQADVSKFRTQLDILGLKIIQVTADGNCFFRALADQLEGNEEEHQKYRSMVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHR--HMSPRWYIRNFDYHEARMIHLSYHDGEHYN---SVRLKEDSCI 465
            G + D +     L  LGL    V  DG+C FRA+A+Q+  ++  H + R   + Y+ +NRE FE FIE    F+EY + +E    W G +E+ A SL+   +  I+R  ++SP     N   +    + L + +G HY+    ++ KE S +
Sbjct:   17 GPREDATPMDAYLRKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRENREKFEAFIEGS--FEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQVTEN---NFPEKVLLCFSNGNHYDIVYPIKYKESSAM 163          
BLAST of EY728298 vs. ExPASy Swiss-Prot
Match: OTU5A_XENLA (OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-A PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11
Identity = 42/148 (28.38%), Postives = 74/148 (50.00%), Query Frame = 1
Query:   28 KQADVSKFRTQLDILGLKIIQVTADGNCFFRALADQLEGNEEEHQKYRSMVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRH-MSPRWYIRNFDYHEARMIHLSYHDGEHYNSVRLKEDSCIG 468
            +Q ++   +T  D  G  I Q+  DG C FRA+ADQ+ G+++ H+  R   + Y++KN + F  ++ +D  F  Y      +     H+E+QA + + +  + ++++   P         +E   I +SYH   HYNSV     + IG
Sbjct:  150 EQQELCFEKTLSDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQKNEDEPIRVSYHRNIHYNSVVNPNKATIG 295          
BLAST of EY728298 vs. ExPASy Swiss-Prot
Match: OTUD5_RAT (OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.416e-11
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = 1
Query:   64 DILGLKIIQVTADGNCFFRALADQLEGNEEEHQKYRSMVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMS-PRWYIRNFDYHEARMIHLSYHDGEHYNSVRLKEDSCIG 468
            D  G  I Q+  DG C FRA+ADQ+ G+++ H+  R   + Y++KN + F  ++ +D  F  Y      +     H+E+QA + + +  + ++++ + P         +E   I +SYH   HYNSV     + IG
Sbjct:  209 DKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIG 342          
BLAST of EY728298 vs. ExPASy Swiss-Prot
Match: OTUD5_MOUSE (OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.416e-11
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = 1
Query:   64 DILGLKIIQVTADGNCFFRALADQLEGNEEEHQKYRSMVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMS-PRWYIRNFDYHEARMIHLSYHDGEHYNSVRLKEDSCIG 468
            D  G  I Q+  DG C FRA+ADQ+ G+++ H+  R   + Y++KN + F  ++ +D  F  Y      +     H+E+QA + + +  + ++++ + P         +E   I +SYH   HYNSV     + IG
Sbjct:  209 DKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIG 342          
BLAST of EY728298 vs. ExPASy Swiss-Prot
Match: OTUD5_XENTR (OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 39/133 (29.32%), Postives = 67/133 (50.38%), Query Frame = 1
Query:   73 GLKIIQVTADGNCFFRALADQLEGNEEEHQKYRSMVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRH-MSPRWYIRNFDYHEARMIHLSYHDGEHYNSVRLKEDSCIG 468
            G  I Q+  DG C FRA+ADQ+ G+++ H+  R   + Y++KN + F  ++ +D  F  Y      +     H+E+QA + + +  + ++++   P         +E   I +SYH   HYNSV     + IG
Sbjct:  170 GFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEPIRVSYHRNIHYNSVVNPNKATIG 300          
BLAST of EY728298 vs. ExPASy Swiss-Prot
Match: OTU5B_XENLA (OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-B PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11
Identity = 39/133 (29.32%), Postives = 67/133 (50.38%), Query Frame = 1
Query:   73 GLKIIQVTADGNCFFRALADQLEGNEEEHQKYRSMVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRH-MSPRWYIRNFDYHEARMIHLSYHDGEHYNSVRLKEDSCIG 468
            G  I Q+  DG C FRA+ADQ+ G+++ H+  R   + Y++KN + F  ++ +D  F  Y      +     H+E+QA + + +  + ++++   P         +E   I +SYH   HYNSV     + IG
Sbjct:  170 GFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEPIRVSYHRNIHYNSVVNPNKATIG 300          
BLAST of EY728298 vs. ExPASy Swiss-Prot
Match: OTUD5_HUMAN (OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.030e-11
Identity = 40/141 (28.37%), Postives = 69/141 (48.94%), Query Frame = 1
Query:   64 DILGLKIIQVTADGNCFFRALADQLEGNEEEHQKYRSMVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRH------MSPRWYIRNFDYHEARMIHLSYHDGEHYNSVRLKEDSCIG 468
            D  G  I Q+  DG C FRA+ADQ+ G+++ H+  R   + Y++KN + F  ++ +D  F  Y      +     H+E+QA + + +  + ++++      + P         +E   I +SYH   HYNSV     + IG
Sbjct:  209 DKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIG 347          
The following BLAST results are available for this feature:
BLAST of EY728298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
OTUD3_HUMAN7.988e-3143.45OTU domain-containing protein 3 OS=Homo sapiens GN... [more]
OTUD4_HUMAN8.873e-1431.58OTU domain-containing protein 4 OS=Homo sapiens GN... [more]
OTU5A_XENLA1.085e-1128.38OTU domain-containing protein 5-A OS=Xenopus laevi... [more]
OTUD5_RAT2.416e-1129.41OTU domain-containing protein 5 OS=Rattus norvegic... [more]
OTUD5_MOUSE2.416e-1129.41OTU domain-containing protein 5 OS=Mus musculus GN... [more]
OTUD5_XENTR3.156e-1129.32OTU domain-containing protein 5 OS=Xenopus tropica... [more]
OTU5B_XENLA3.156e-1129.32OTU domain-containing protein 5-B OS=Xenopus laevi... [more]
OTUD5_HUMAN7.030e-1128.37OTU domain-containing protein 5 OS=Homo sapiens GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-A04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728298 ID=EY728298; Name=EY728298; organism=Citrus sinensis; type=EST; length=736bp
CCACGCGTCCGCCCACGCGTCCGTGGAAAGCAGGCTGATGTTTCCAAGTT
CCGCACTCAGCTTGACATACTAGGCCTAAAAATCATCCAGGTCACAGCTG
ACGGTAATTGTTTCTTCAGGGCTCTTGCAGATCAGTTGGAAGGTAACGAG
GAGGAACATCAAAAATATCGCAGTATGGTGGTACAATATATAGTGAAGAA
CCGTGAAACATTTGAGCCCTTCATTGAGGATGATGTCCCTTTTGATGAAT
ACTGCCAATCCATGGAAACGGATGGAACATGGGCTGGACATATGGAATTG
CAAGCAGCTTCTCTTGTTACACATAGTAATATATGCATTCATCGGCACAT
GTCGCCTCGCTGGTACATTAGGAATTTCGATTACCATGAAGCTCGTATGA
TCCATTTATCTTATCATGATGGTGAACATTACAATAGTGTACGGTTGAAG
GAAGACTCTTGTATTGGCTCAGCCAGGCCAATTATAATCAAGGCCGATGC
TGATATTTCAGCGGCATCTATTCAATCAAAAACTGTGACAAGCAAGCCTT
AAGGGGCAGCTGGTATCATCAATGCAGGATCTATCAAATTGGGTATGGCA
GGAAGTGGCTGTGAAAAATCCTGAAAAAGTTGAAGAGGTTTTACTTGCAA
GTAGGTTGGTGATGTTGATGCACCGATCGAGTTTCTGATTCCAAAACAGG
GAACAGAAAAATACTCTGTCAAAAGCCATAATTCCA
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