EY728279

Overview
NameEY728279
Unique NameEY728279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSEFL (Bifunctional protein pyrR OS=Pseudomonas fluorescens GN=pyrR PE=3 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.898e-79
Identity = 148/168 (88.10%), Postives = 155/168 (92.26%), Query Frame = -2
Query:  303 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLAL 806
            MS PNP   ISQM   LKAHLEHR IS+PR+IGIRTGGVWVAQALLE LGS SPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDA ELPI P+VVGATL+L AH+RVKLSGP+PL+LELQDLAL
Sbjct:    1 MSLPNPAELISQMAIRLKAHLEHRGISDPRYIGIRTGGVWVAQALLEALGSQSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAAELPIRPNVVGATLTLAAHERVKLSGPSPLQLELQDLAL 168          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSEF5 (Bifunctional protein pyrR OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pyrR PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 7.351e-78
Identity = 147/168 (87.50%), Postives = 153/168 (91.07%), Query Frame = -2
Query:  303 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLAL 806
            MS PNP   ISQM + L AHL  RAISEPRFIGIRTGGVWVAQALLE LGSDSPLGTLDVSFYRDDFSQNGLHPQVRPS LPFEIEGQHLVLIDDVLMSGRTIRAA+NELFDYGRPASVTLVCLLDL+A ELPI P+VVGATLSL AH+RVKLSGP PL+LELQDLAL
Sbjct:    1 MSLPNPAALISQMAADLNAHLAQRAISEPRFIGIRTGGVWVAQALLEALGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSELPFEIEGQHLVLIDDVLMSGRTIRAALNELFDYGRPASVTLVCLLDLNAAELPIRPNVVGATLSLAAHERVKLSGPAPLQLELQDLAL 168          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSEPW (Bifunctional protein pyrR OS=Pseudomonas putida (strain W619) GN=pyrR PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 8.411e-74
Identity = 139/172 (80.81%), Postives = 150/172 (87.21%), Query Frame = -2
Query:  291 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLAL*TAL 806
            MS PNP   I QM   L+AHL  R I+EPR+IGIRTGGVWVAQAL +ELG  SPLGTLDVSFYRDDFSQNGLHPQVRPS LPFE+EGQHLVLIDDVLMSGRTIRAA+NELFDYGRPASVTLVCLLDLDAGELPI P+V+GATLSL AH+RVKL+GP PL LE QDLA  +AL
Sbjct:    1 MSLPNPADLIRQMAVDLRAHLARRGITEPRYIGIRTGGVWVAQALQQELGDTSPLGTLDVSFYRDDFSQNGLHPQVRPSELPFEVEGQHLVLIDDVLMSGRTIRAALNELFDYGRPASVTLVCLLDLDAGELPIRPNVLGATLSLAAHERVKLTGPAPLALERQDLATASAL 172          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSEE4 (Bifunctional protein pyrR OS=Pseudomonas entomophila (strain L48) GN=pyrR PE=3 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.098e-73
Identity = 140/172 (81.40%), Postives = 149/172 (86.63%), Query Frame = -2
Query:  291 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLAL*TAL 806
            MS PNP   I QM   L+AHL  R I+EPRFIGIRTGGVWVAQAL  ELG  SPLGTLDVSFYRDDFSQNGLHPQVRPS LPFEIEGQHLVL+DDVLMSGRTIRAA+NELFDYGRPASVTL CLLDLDAGELPI P+V+GATLSL AH+RVKL+GPTPL LE QDLA  +AL
Sbjct:    1 MSLPNPADLIRQMAVDLRAHLARREITEPRFIGIRTGGVWVAQALQAELGDQSPLGTLDVSFYRDDFSQNGLHPQVRPSELPFEIEGQHLVLVDDVLMSGRTIRAALNELFDYGRPASVTLACLLDLDAGELPIRPNVLGATLSLAAHERVKLTGPTPLALERQDLAPASAL 172          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSEPU (Bifunctional protein pyrR OS=Pseudomonas putida GN=pyrR PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.447e-73
Identity = 137/172 (79.65%), Postives = 150/172 (87.21%), Query Frame = -2
Query:  291 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLAL*TAL 806
            MS PNP   I QM   L+AHL  RAI+EPR+IGIRTGGVWVAQAL E +G  SP+GTLDVSFYRDDFSQNGLHPQVRPS LPFE+EGQHLVL+DDVLMSGRTIRAA+NELFDYGRPASVTLVCLLDLDAGELPI P+V+GATLSL AH+RVKL+GP PL LE QDLA  +AL
Sbjct:    1 MSLPNPADLIRQMAVDLRAHLARRAITEPRYIGIRTGGVWVAQALQEAMGDSSPMGTLDVSFYRDDFSQNGLHPQVRPSELPFEVEGQHLVLVDDVLMSGRTIRAALNELFDYGRPASVTLVCLLDLDAGELPIRPNVLGATLSLAAHERVKLTGPAPLALERQDLASRSAL 172          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSEPG (Bifunctional protein pyrR OS=Pseudomonas putida (strain GB-1) GN=pyrR PE=3 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 7.120e-73
Identity = 137/172 (79.65%), Postives = 149/172 (86.63%), Query Frame = -2
Query:  291 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLAL*TAL 806
            MS PNP   I QM   L+AHL  R ISEPR+IGIRTGGVWVAQAL E +G  SP+GTLDVSFYRDDFSQNGLHPQVRPS LPFE+EGQHLVL+DDVLMSGRTIRAA+NELFDYGRPASVTLVCLLDLDAGELPI P+V+GATLSL AH+RVKL+GP PL LE QDLA  +AL
Sbjct:    1 MSLPNPAELIRQMAVDLRAHLARRHISEPRYIGIRTGGVWVAQALQEAMGDTSPMGTLDVSFYRDDFSQNGLHPQVRPSELPFEVEGQHLVLVDDVLMSGRTIRAALNELFDYGRPASVTLVCLLDLDAGELPIRPNVLGATLSLAAHERVKLTGPAPLALERQDLASASAL 172          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSESM (Bifunctional protein pyrR OS=Pseudomonas syringae pv. tomato GN=pyrR PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 2.072e-72
Identity = 136/167 (81.44%), Postives = 147/167 (88.02%), Query Frame = -2
Query:  306 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLA 806
            MS PNP   I QM + L AHL  R IS+PRFIGIRTGGVWVAQALLE L + SPLGTLDVSFYRDDFSQNGLHPQVRPS LPFEIEGQHLVLIDDVLMSGRT+RAA+NELFDYGRPASVTLVCLLDL+AGELPI P+VVGATLSL  ++R+KLSGP PL LELQDL+
Sbjct:    1 MSLPNPAELIRQMATDLNAHLSKRGISDPRFIGIRTGGVWVAQALLEALNNPSPLGTLDVSFYRDDFSQNGLHPQVRPSELPFEIEGQHLVLIDDVLMSGRTVRAALNELFDYGRPASVTLVCLLDLNAGELPIRPNVVGATLSLAPNERIKLSGPEPLALELQDLS 167          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSEU2 (Bifunctional protein pyrR OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pyrR PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.991e-71
Identity = 133/167 (79.64%), Postives = 146/167 (87.43%), Query Frame = -2
Query:  306 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLA 806
            MS P+P   I QM + L AHL  R IS+PRFIGIRTGGVWVAQALL+ L + +PLGTLDVSFYRDDFSQNGLHPQVRPS LPFEIEGQHLVLIDDVLMSGRT+RAA+NELFDYGRPASVTLVCLLDLDAGELP+ P+VVGATLSL   +R+KLSGP PL LELQDL+
Sbjct:    1 MSLPDPAELIRQMATDLNAHLSKRGISDPRFIGIRTGGVWVAQALLKALNNPAPLGTLDVSFYRDDFSQNGLHPQVRPSELPFEIEGQHLVLIDDVLMSGRTVRAALNELFDYGRPASVTLVCLLDLDAGELPVRPNVVGATLSLAPDERIKLSGPEPLALELQDLS 167          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSE14 (Bifunctional protein pyrR OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pyrR PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.991e-71
Identity = 134/167 (80.24%), Postives = 146/167 (87.43%), Query Frame = -2
Query:  306 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLA 806
            MS P+P   I QM + L AHL  R IS+PRFIGIRTGGVWVAQALL+ L + +PLGTLDVSFYRDDFSQNGLHPQVRPS LPFEIEGQHLVLIDDVLMSGRT+RAA+NELFDYGRPASVTLVCLLDLDAGELPI P+VVGATLSL   +R+KLSGP PL LELQDL+
Sbjct:    1 MSLPDPAELIRQMATDLNAHLSKRGISDPRFIGIRTGGVWVAQALLKALNNPAPLGTLDVSFYRDDFSQNGLHPQVRPSDLPFEIEGQHLVLIDDVLMSGRTVRAALNELFDYGRPASVTLVCLLDLDAGELPIRPNVVGATLSLAPDERIKLSGPEPLALELQDLS 167          
BLAST of EY728279 vs. ExPASy Swiss-Prot
Match: PYRR_PSEAE (Bifunctional protein pyrR OS=Pseudomonas aeruginosa GN=pyrR PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.625e-67
Identity = 125/167 (74.85%), Postives = 140/167 (83.83%), Query Frame = -2
Query:  306 MSXPNPRXXISQMRSXLKAHLEHRAISEPRFIGIRTGGVWVAQALLEELGSDSPLGTLDVSFYRDDFSQNGLHPQVRPSALPFEIEGQHLVLIDDVLMSGRTIRAAMNELFDYGRPASVTLVCLLDLDAGELPISPDVVGATLSLEAHQRVKLSGPTPLELELQDLA 806
            MS PNP   + +M S L+AHL  R I  PRF+GI TGG+WVA+ALL ELG+  PLGTLDVSFYRDDF+QNGLHPQVRPSALPFEI+GQHLVL+DDVLMSGRTIRAA+NELFDYGRPASVTLVCLLDL+A ELPI PDVVG TLSL   +RVKL GP PL LE + L+
Sbjct:    1 MSLPNPAELLPRMASDLRAHLAERGIERPRFVGIHTGGIWVAEALLRELGNQEPLGTLDVSFYRDDFTQNGLHPQVRPSALPFEIDGQHLVLVDDVLMSGRTIRAALNELFDYGRPASVTLVCLLDLNARELPIRPDVVGQTLSLGRDERVKLVGPAPLALERKVLS 167          
The following BLAST results are available for this feature:
BLAST of EY728279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 399
Match NameE-valueIdentityDescription
PYRR_PSEFL3.898e-7988.10Bifunctional protein pyrR OS=Pseudomonas fluoresce... [more]
PYRR_PSEF57.351e-7887.50Bifunctional protein pyrR OS=Pseudomonas fluoresce... [more]
PYRR_PSEPW8.411e-7480.81Bifunctional protein pyrR OS=Pseudomonas putida (s... [more]
PYRR_PSEE41.098e-7381.40Bifunctional protein pyrR OS=Pseudomonas entomophi... [more]
PYRR_PSEPU2.447e-7379.65Bifunctional protein pyrR OS=Pseudomonas putida GN... [more]
PYRR_PSEPG7.120e-7379.65Bifunctional protein pyrR OS=Pseudomonas putida (s... [more]
PYRR_PSESM2.072e-7281.44Bifunctional protein pyrR OS=Pseudomonas syringae ... [more]
PYRR_PSEU22.991e-7179.64Bifunctional protein pyrR OS=Pseudomonas syringae ... [more]
PYRR_PSE142.991e-7180.24Bifunctional protein pyrR OS=Pseudomonas syringae ... [more]
PYRR_PSEAE7.625e-6774.85Bifunctional protein pyrR OS=Pseudomonas aeruginos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-G06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728279 ID=EY728279; Name=EY728279; organism=Citrus sinensis; type=EST; length=927bp
ACGTTCAGCGTGATCACGTCAGCCGACAGGCGCTGGGCCGCCAGCTCAAA
GGTGGTACGGGTGCGGGTCGAGTTCTCGAAGAACACGTTGCAGATGGTCT
TGCCGCGCAACAGCGGGACTTTTTTCACCGCCCGACCGCCGACTTCGAGG
AACGAGTCGGCCGTGTCGAGGATTTCGGTGAGCAGTTCGCGGGGCAAGCC
GTCGAGGGACAGGAAGTGTTGCAGCTGGCCCTGAGCATTGAGCTGCAGCG
GGCGCTTGGCATCTAGAGGCGTCATCGCGGGGACTCTTTACAAGGCGGTT
TAAAGGGCAAGGTCTTGCAGTTCGAGTTCGAGCGGCGTGGGACCGGACAA
TTTTACCCGCTGGTGGGCTTCCAGGGACAGGGTGGCGCCGACGACGTCCG
GGCTGATCGGCAATTCGCCGGCATCCAGGTCCAGCAGGCAGACCAGCGTC
ACGCTGGCCGGGCGGCCGTAGTCGAACAGCTCGTTCATGGCGGCGCGGAT
GGTGCGACCGCTCATCAGGACGTCATCGATCAGCACCAGGTGCTGGCCTT
CGATCTCGAACGGCAGGGCCGAAGGACGCACTTGCGGGTGCAGGCCGTTC
TGGCTGAAGTCGTCGCGGTAGAAGGACACGTCCAGGGTGCCGAGGGGCGA
GTCGCTGCCCAGTTCTTCCAAGAGCGCCTGGGCCACCCACACGCCACCGG
TACGAATGCCGATAAAACGCGGCTCGCTGATGGCGCGGTGTTCCAGGTGC
GCCTTGAGGCNGGATCGCATCTGGCTGATCANGNNTCGCGGATTGGGCAN
GCTCATGGTGGCTCCTTCANGGNCTTGNNCGCGCGGGGTTGCCCTGCAGG
TCCNGGCTCAACGTANGAGACGCGGNCAGCCGCGTCAGTCAGGATCAAAT
AANGCGTGTTTTCATCCAGCAGCCTGC
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