EY728268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728268 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.104e-20 Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = -3 Query: 19 FLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKD 231 FL SLPTQLQATKVMAVQ+TLSTHSPDEEYL ++ ++ HW D +V+ F+KFS L +IEK IN RNKD Sbjct: 811 FLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKD 881 HSP 2 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 198 LLEAEWAVKTKNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 347 L++ E + +NKD +LK R GAG+PPYELLLP+S GVTGRGIPNSISI Sbjct: 868 LVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
BLAST of EY728268 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.145e-16 Identity = 48/100 (48.00%), Postives = 60/100 (60.00%), Query Frame = -3 Query: 19 RLLPDQRKEEAVHMAECQHHICL*DGNLYFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKD 318 RL+PD+ E E D YF SS+P+ LQ TK MAV DTLSTHSPDEEY+G+ Q S W D E+++ F FSA + IEK I+ RN+D Sbjct: 800 RLIPDESDPEFTSFIE--------DPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGE-RQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRD 890
BLAST of EY728268 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = -3 Query: 19 YFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKD 234 Y+ SS+P+ Q +K MAV DTLSTHSPDEEY+G+ Q S W D E++ F F+A + IEK I RN D Sbjct: 813 YYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGE-RQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNAD 883
BLAST of EY728268 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.332e-11 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = -3 Query: 19 RLLPDQRKEEAVHMAECQHHICL*DGNLYFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQ-VNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKD 318 RLLPD ++ A + A L D + +FL+++P L+ATK MAV DTLSTHSPDEEYLG+ ++ W D + F+A++ E+ I RN D Sbjct: 788 RLLPDLERDAAEYAA------FLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNAD 882
BLAST of EY728268 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.332e-11 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = -3 Query: 19 LSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKD 228 L SLP+Q+QA KVMA D LS+HSPDEEY+G+ + W+ +P V F+KFS L+E E I+ RN + Sbjct: 793 LQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAE--PAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNN 860 The following BLAST results are available for this feature:
BLAST of EY728268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728268 ID=EY728268; Name=EY728268; organism=Citrus sinensis; type=EST; length=626bpback to top |