EY728239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.955e-47 Identity = 103/226 (45.58%), Postives = 136/226 (60.18%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR 690 GRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGM AD+R+ VQ+ARYEAA +++KYGYE+PV D+ CK RIAD SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEK+ Sbjct: 20 GRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPV-----------------------DMLCK----------------------------------------RIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKK 182
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.955e-47 Identity = 103/226 (45.58%), Postives = 136/226 (60.18%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR 690 GRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGM AD+R+ VQ+ARYEAA +++KYGYE+PV D+ CK RIAD SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEK+ Sbjct: 20 GRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPV-----------------------DMLCK----------------------------------------RIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKK 182
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.955e-47 Identity = 103/226 (45.58%), Postives = 136/226 (60.18%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR 690 GRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGM AD+R+ VQ+ARYEAA +++KYGYE+PV D+ CK RIAD SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEK+ Sbjct: 20 GRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPV-----------------------DMLCK----------------------------------------RIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKK 182
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.955e-47 Identity = 103/226 (45.58%), Postives = 136/226 (60.18%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR 690 GRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGM AD+R+ VQ+ARYEAA +++KYGYE+PV D+ CK RIAD SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEK+ Sbjct: 20 GRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPV-----------------------DMLCK----------------------------------------RIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKK 182
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.563e-46 Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD TSV+HLFPITKYLGLLATGM ADARTLVQQAR EAAEFRFKYGYEMPVDVL+KW Sbjct: 20 GRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKW 117 HSP 2 Score: 125.176 bits (313), Expect = 2.140e-31 Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR 690 IADKSQVYTQHAYMRPLGVVAM+L IDEE GP+LFKCDPAGHFFGHKATSAG KEQEAINFLEK+ Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKK 182 HSP 3 Score: 32.3426 bits (72), Expect = 2.140e-31 Identity = 19/48 (39.58%), Postives = 28/48 (58.33%), Query Frame = 3 Query: 675 FLGEEMKNDPAFTFQKLCRLQFPTCISPCR-GF*ASEIXXCVXSKENP 815 FL ++MKNDPAF++++ + S + F ASEI V KE+P Sbjct: 178 FLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDP 225
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 7.458e-46 Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRLFQVEYAFKAVKAAG+TSIGVRGKDS+CVVT KKVPDKLLD+TSVTHLFPITKYLGLLATGM ADARTLVQQAR EAAEFRF YGYEMPVDVLAKW Sbjct: 20 GRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKW 117 HSP 2 Score: 123.635 bits (309), Expect = 2.140e-31 Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR 690 IADKSQVYTQHAYMRPLGVVAMVL ID+E GP+L+KCDPAGH+FGHKATSAGLK+QEAINFLEK+ Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKK 182 HSP 3 Score: 33.8834 bits (76), Expect = 2.140e-31 Identity = 19/49 (38.78%), Postives = 29/49 (59.18%), Query Frame = 3 Query: 675 FLGEEMKNDPAFTFQKLCRLQFPTCISPCR-GF*ASEIXXCVXSKENPE 818 FL ++MKNDP+FT+++ + S + F A+EI V K+NPE Sbjct: 178 FLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPE 226
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.702e-45 Identity = 89/98 (90.82%), Postives = 95/98 (96.94%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRL+QVEYAFKAVK+AGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKY+GLLATG+ ADAR+LV QAR EAAEFRFK+GYEMPVDVLAKW Sbjct: 20 GRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKW 117 HSP 2 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 63/100 (63.00%), Postives = 72/100 (72.00%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR*RMILRLPFRNCADCNFPP-ASVPAEDFRXVKLXV 792 IADK+QVYTQHAYMRPLGVVAMVL DEE +LFKCDPAGHFFGHKATSAGLKEQEAINFLEK+ + + + SV EDF+ ++ V Sbjct: 118 IADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEV 217
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.134e-44 Identity = 86/98 (87.76%), Postives = 94/98 (95.92%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD +SV+HLFP+TKYLGLLATGM AD+R+LVQQAR EAAEFRF+YGYEMP D+LAKW Sbjct: 20 GRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKW 117 HSP 2 Score: 123.25 bits (308), Expect = 2.665e-28 Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR 690 IADKSQVYTQHAYMRPLGVVAMVL IDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLEK+ Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKK 182 HSP 3 Score: 23.8682 bits (50), Expect = 2.665e-28 Identity = 15/48 (31.25%), Postives = 25/48 (52.08%), Query Frame = 3 Query: 675 FLGEEMKNDPAFTFQKLCRLQFPTCISPCR-GF*ASEIXXCVXSKENP 815 FL ++MK +PAFT+ + + S + F A+EI V ++P Sbjct: 178 FLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDP 225
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.555e-43 Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRLFQVEYAFKAVK AG+TSIGVRGKDSVCVVTQKKVPDKLLD +SVTHLFPITKY+GL+ATG+ ADAR+LVQQAR +AAEFRF YGYEMPVD+LAKW Sbjct: 20 GRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKW 117 HSP 2 Score: 122.865 bits (307), Expect = 2.665e-27 Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR*RMILRLPFRNCADCNFPP-ASVPAEDFRXVKLXVAX*ARRIQNQSF 828 IADKSQVYTQHAYMRPLGVVAMV+ +DEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLEK+ + F SV EDF+ ++ V R +N F Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVG--VVRAENPEF 227
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 3.042e-31 Identity = 86/226 (38.05%), Postives = 115/226 (50.88%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKR 690 GRL+QVEYAFKA+ +T++ ++ D V TQKKV +K + +VTHLF ITK +G TG IAD+R+ VQ+ARYEAA FR Y Y + V D+ C+ RIAD +QVYTQ+A MRPLG ++++ D E GP ++K DPAG+F G KA S G K EA ++LEK+ Sbjct: 20 GRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFR--YKYGYEMPV---------------------DVLCR----------------------------------------RIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKK 182 The following BLAST results are available for this feature:
BLAST of EY728239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728239 ID=EY728239; Name=EY728239; organism=Citrus sinensis; type=EST; length=927bpback to top |