EY753889

Overview
NameEY753889
Unique NameEY753889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753889_ssr661 microsatellite EY753889_ssr661:661..672. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.681e-66
Identity = 132/188 (70.21%), Postives = 153/188 (81.38%), Query Frame = 2
Query:   68 QIVDMLRKHTYNDELEQSKRNY---GLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS--TSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFKI 616
            +IVDMLRKHTY DELEQ+ +      +DANGKR       +G +T   +D+VLK R+ LFEKAVTPSDVGKLNRLVIPKQHAEKHFPL S S   +KG+L+NFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F RSTG +RQLYIDWK R+GP ENPV+ V  +RLFGV+IF +
Sbjct:  137 EIVDMLRKHTYADELEQNNKRQLFLSVDANGKR-------NGSSTT-QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVV--VRLFGVDIFNV 314          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.923e-62
Identity = 125/192 (65.10%), Postives = 148/192 (77.08%), Query Frame = 2
Query:   68 QIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATA-FGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS--------KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFKI 616
            +IVDMLRKHTY DE EQS+R + ++ +GKR        G+ TA +G+D VL+AR+ LFEK VTPSDVGKLNRLVIPKQHAEKHFPL + +T+        KG+L+N ED TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V F RSTG DRQLYI WK R+ PV+       ++RLFGVNIF +
Sbjct:  146 EIVDMLRKHTYADEFEQSRRKF-VNGDGKR-------SGLETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQT------VVRLFGVNIFNV 323          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.237e-60
Identity = 121/183 (66.12%), Postives = 142/183 (77.60%), Query Frame = 2
Query:   68 QIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHG--EGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS-KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNI 607
            +IVDMLRKHTYN+ELEQSKR    + N  R +       DGV+T        ++ + LFEKAVTPSDVGKLNRLVIPK HAEKHFPL S + S KG+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+VSF RS G D+QLYI WK+R+G   + ++  +++RLFGVNI
Sbjct:  135 EIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTG-----FRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSG---SDLDAGRVLRLFGVNI 309          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.608e-54
Identity = 119/219 (54.34%), Postives = 140/219 (63.93%), Query Frame = 2
Query:    8 SRADPRVRSKWLS*APTPSPQIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRV-LKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ---SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWK-------ARTGPVENPV-EPVQMMRLFGVNIFKIP 619
            + ADP   ++    A     ++VDMLRKHTY DEL QSKR +               +G  ++  S      ARD LF+K VTPSDVGKLNRLVIPKQHAEKHFPLQ   +G  SKG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD+V F+R   S G D +L+ID K       A   P + P   PV+ +RLFGV++   P
Sbjct:  139 AEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLSNGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.356e-52
Identity = 112/184 (60.87%), Postives = 131/184 (71.20%), Query Frame = 2
Query:   68 QIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVA-TAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNI 607
            +IVDMLRKHTY +EL+Q KRN   D NGK          V  T F      K  + LFEK VTPSDVGKLNRLVIPK  AEKHFPL  G+ +   KG+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++SF RS   D++ +I WK+++G     +E  ++MRLFGV+I
Sbjct:  134 EIVDMLRKHTYKEELDQRKRNR--DGNGKETTAFALASMVVMTGF------KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSG---LDLETGRVMRLFGVDI 306          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.006e-48
Identity = 111/233 (47.64%), Postives = 134/233 (57.51%), Query Frame = 2
Query:    8 SRADPRVRSKWLS*APTPSPQIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ------------------SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGP---------------VENPVEPVQMMRLFGVNI 607
            + +DP    +    A     ++VDMLRKHTY +EL Q+KR +   A      KH      +++        AR+ LF+K VTPSDVGKLNRLVIPKQHAEKHFPLQ                   G   KG+LLNFED  GKVW+FRYSYWNSSQSYVLTKGWSRFVKEK L AGD V F+R+ G + QL+ID K R  P                  P   V+ +RLFGV++
Sbjct:  126 AESDPEAAVELRFLASRSKAEVVDMLRKHTYLEELTQNKRAFA--AISPPPPKHPASSPTSSS-------AAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRAAGKNAQLFIDCKVRAKPTTAAAAAAFLSAVAAAAAPPPAVKAIRLFGVDL 349          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: Y1410_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. japonica GN=Os01g0141000 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.479e-46
Identity = 109/202 (53.96%), Postives = 128/202 (63.37%), Query Frame = 2
Query:   68 QIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ---------SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRST-GGDRQLYIDWKARTG------------PVENPVEPVQMMRLFGVNI 607
            +IVDMLRKHTY DEL Q              ++ G G G   A        AR+ LFEKAVTPSDVGKLNRLV+PKQHAEKHFPL+         + +T KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFV+EK L+AGD + F RS  G D+ L+ID K                P  +  EP +++RLFGV+I
Sbjct:  142 EIVDMLRKHTYADELRQG-------------LRRGRGMG---ARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPDKLLFIDCKKNNAAAATTTCAGDERPTTSGAEP-RVVRLFGVDI 326          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.693e-42
Identity = 83/122 (68.03%), Postives = 97/122 (79.51%), Query Frame = 2
Query:  209 RVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWKARTGPVENP 565
            R +  R+ +F+K VTPSDVGKLNRLVIPKQHAE+ FPL S S  KGLLLNFED+TGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDIVSF R    +G D +L+IDW+ R    ++P
Sbjct:   26 REVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVPDHP 147          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: Y1407_ORYSJ (Putative AP2/ERF and B3 domain-containing protein Os01g0140700 OS=Oryza sativa subsp. japonica GN=Os01g0140700 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.925e-42
Identity = 100/190 (52.63%), Postives = 119/190 (62.63%), Query Frame = 2
Query:   68 QIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPL-----QSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRST---GGDRQLYIDWK--ARTGPVENPVEPVQMMRLFGVNI 607
            ++VDMLRKHTY+DEL+Q  R       G R                     AR+ LFEKAVTPSDVGKLNRLV+PKQ AE+HFP       S +  KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFV+EK L+ GD V+F RS    G ++ L ID K   R        +   +++LFGV+I
Sbjct:  142 EVVDMLRKHTYDDELQQGLRR------GSRA--------------QPTPRWAREPLFEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRSAAAWGTEKHLLIDCKKMERNNLATVDDDARVVVKLFGVDI 311          
BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: Y2835_ORYSJ (B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os02g0683500 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.702e-40
Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 2
Query:  176 GDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGD---RQLYIDWKAR 544
            G G     G +  +  ++ +F+K VTPSDVGKLNRLVIPKQ+AEK+FPL + +  KGLLLNFED  GK WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF R  G +    +L+IDWK R
Sbjct:   76 GSGGGGGGGGEAEVVEKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDAAANEKGLLLNFEDRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDEAARHRLFIDWKRR 201          
The following BLAST results are available for this feature:
BLAST of EY753889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RAV2_ARATH1.681e-6670.21AP2/ERF and B3 domain-containing transcription rep... [more]
RAVL1_ARATH1.923e-6265.10AP2/ERF and B3 domain-containing transcription rep... [more]
RAV1_ARATH5.237e-6066.12AP2/ERF and B3 domain-containing transcription fac... [more]
Y1934_ORYSJ5.608e-5454.34AP2/ERF and B3 domain-containing protein Os01g0693... [more]
RAVL4_ARATH2.356e-5260.87AP2/ERF and B3 domain-containing transcription fac... [more]
Y5498_ORYSJ6.006e-4847.64AP2/ERF and B3 domain-containing protein Os05g0549... [more]
Y1410_ORYSJ1.479e-4653.96AP2/ERF and B3 domain-containing protein Os01g0141... [more]
NGA1_ARATH1.693e-4268.03B3 domain-containing transcription factor NGA1 OS=... [more]
Y1407_ORYSJ4.925e-4252.63Putative AP2/ERF and B3 domain-containing protein ... [more]
Y2835_ORYSJ2.702e-4063.49B3 domain-containing protein Os02g0683500 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753889 ID=EY753889; Name=EY753889; organism=Citrus sinensis; type=EST; length=920bp
CCGGNATTCCAGAGCCGACCCACGCGTCCGATCGAAATGGCTTTCTTGAG
CTCCCACTCCAAGTCCGCAGATCGTCGATATGCTGAGGAAGCACACTTAC
AACGACGAGCTCGAGCAGAGCAAAAGAAACTACGGCCTCGATGCCAACGG
CAAGCGTGTAATCAAACACGGGGAAGGTGATGGTGTTGCCACTGCCTTCG
GTTCAGACCGGGTCCTTAAAGCGCGTGACCAGCTTTTTGAAAAGGCCGTT
ACCCCAAGTGACGTGGGGAAGCTGAACCGGCTCGTGATACCCAAGCAGCA
CGCGGAGAAGCACTTCCCTTTACAGAGCGGAAGCACTTCCAAGGGACTGC
TCTTGAACTTTGAGGATGTCACCGGCAAAGTTTGGAGGTTTAGGTACTCC
TACTGGAACAGCAGTCAAAGCTACGTTTTGACCAAAGGGTGGAGCCGGTT
CGTCAAGGAGAAGAATTTGAAAGCCGGTGACATTGTTAGCTTTCACAGAT
CGACCGGTGGGGATAGGCAGCTTTACATTGATTGGAAAGCCAGAACAGGA
CCGGTCGAGAACCCGGTCGAGCCGGTCCAGATGATGAGGCTATTTGGGGT
CAACATTTTCAAAATTCCTGGGAATGGTCTTGTTGGTGTCNATAAGATTG
GGTGGCACATTAATAATAATAACGACGGCCAAAGGCTTANAGAAATGGAG
CTCTTGTCTCTAGAGTGCCAGCAAAAACAAGAATGATTGGAGCTTCGAAA
CACCTTTTTTCTTTTTCTTCTTTTTTGAAATCCTATTCCTTGGGGGAATT
TTCCTTTTCTCTTTTCCTTTGGGGGTTTTGGGATTTTGAGGAGTTTAAGG
GGGAAAAAAAACTGGGGAAGGTGGGGCCCCTTTTTGCAGTTGCAAAGGAA
AGGAAGGGTTAATTGTAAAT
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