EY753884

Overview
NameEY753884
Unique NameEY753884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753884 vs. ExPASy Swiss-Prot
Match: VPS41_SOLLC (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum GN=VPS41 PE=2 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 6.651e-116
Identity = 208/277 (75.09%), Postives = 232/277 (83.75%), Query Frame = 3
Query:    6 PSEVVTQLLNARDKCDSRYFLHLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKESRRAVCLTNEEDDARAKKSGSRASXAPXKCRVLKP*G-*VKN*GGCRCCMCFDPFSYKSI-XXGFFCCMLTH 830
            PSEVV+QL+ ARDKCD RYFLHLYLH+LFEVNLHAGKD+HDMQVELYADYD KMLL FLRSSQHYTLEKAYEICVK+DLL+EQVFILGRMGN K ALAVIIN+LGDIEEA+EFV+MQ DDELWEELI+Q  +KPEMVGVLLEHTVGNLDPLYIVNM+PN LEIPRLRDRLVKI+TDYRTETSLRHGCNDILKAD VNLLVKYYKE++R VCL++E DD  +++     S    +   LK      K  GG RCC+CFDPFS  ++    FFCC   H
Sbjct:  616 PSEVVSQLIAARDKCDYRYFLHLYLHSLFEVNLHAGKDYHDMQVELYADYDPKMLLTFLRSSQHYTLEKAYEICVKKDLLKEQVFILGRMGNAKQALAVIINRLGDIEEAIEFVSMQQDDELWEELIQQSFHKPEMVGVLLEHTVGNLDPLYIVNMLPNDLEIPRLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYKEAKRGVCLSDEVDDVSSRRGEKSVSHLGERTMSLKSVEVKSKTRGGGRCCICFDPFSILNVSIIAFFCCHAYH 892          
BLAST of EY753884 vs. ExPASy Swiss-Prot
Match: VPS41_ARATH (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana GN=VPS41 PE=2 SV=3)

HSP 1 Score: 404.445 bits (1038), Expect = 4.461e-112
Identity = 208/291 (71.48%), Postives = 229/291 (78.69%), Query Frame = 3
Query:    6 PSEVVTQLLNARD---------KCDSRYFLHLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKESRRAVCLTNEEDDARAKKSGSRASXAPXKCRVLKP*G------*VKN*GGCRCCMCFDPFSYK-SIXXGFFCCMLTH 830
            PSEVV QLL A           KCDSRY+L+LYLHALFEV+   GKDFHDMQVELYA+YD KMLLPFLRSSQHY LEKAYE+CVK+D LREQVF+LGRMGN K ALAVIINKLGDIEEAVEFV+MQHDD+LWEELIKQCLNKPEMVG+LLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKI+TDYRTETSLRHGCNDILK DIVNLLVK + E+RR VCL++E+DD+RAK+  +  S    +  V K           K  G  RCCMCFDP S +      FFCC   H
Sbjct:  622 PSEVVPQLLKAGKNPQVLKAGKKCDSRYYLYLYLHALFEVSHDTGKDFHDMQVELYAEYDTKMLLPFLRSSQHYKLEKAYELCVKKDFLREQVFVLGRMGNAKQALAVIINKLGDIEEAVEFVSMQHDDDLWEELIKQCLNKPEMVGLLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIVTDYRTETSLRHGCNDILKTDIVNLLVKCFNEARRGVCLSHEDDDSRAKREDNNRSSFSQRMVVDKSLSIKMTEVKSKTRGDTRCCMCFDPVSIRGDTVVVFFCCHAYH 912          
BLAST of EY753884 vs. ExPASy Swiss-Prot
Match: VPS41_MOUSE (Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus GN=Vps41 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.703e-45
Identity = 86/194 (44.33%), Postives = 129/194 (66.49%), Query Frame = 3
Query:   69 HLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKESRRAVCLTNE 650
            H+YLH LF+ + H G+ +H+ Q+ LYA+YD   LLPFLR S H  LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF   Q D ELWE+LI   ++KP  +  LL +   ++DP+ +++ +  G+EIP LRD LVKI+ DY  +  LR GC  IL AD ++LL K ++   + V +  E
Sbjct:  594 HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEE 787          
BLAST of EY753884 vs. ExPASy Swiss-Prot
Match: VPS41_HUMAN (Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens GN=VPS41 PE=2 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 4.703e-45
Identity = 86/194 (44.33%), Postives = 129/194 (66.49%), Query Frame = 3
Query:   69 HLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKESRRAVCLTNE 650
            H+YLH LF+ + H G+ +H+ Q+ LYA+YD   LLPFLR S H  LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF   Q D ELWE+LI   ++KP  +  LL +   ++DP+ +++ +  G+EIP LRD LVKI+ DY  +  LR GC  IL AD ++LL K ++   + V +  E
Sbjct:  595 HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEE 788          
BLAST of EY753884 vs. ExPASy Swiss-Prot
Match: VPS41_SCHPO (Vacuolar protein sorting-associated protein 41 OS=Schizosaccharomyces pombe GN=vps41 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.796e-28
Identity = 64/207 (30.92%), Postives = 124/207 (59.90%), Query Frame = 3
Query:    6 PSEVVTQLLNARDKCDSRYFLHLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKESR 626
            P EV+ Q+ +         FL+ Y      +  ++  ++ D++++++A++D K    FL ++Q Y+L+ A +IC + + L E V+ILGRMGN K AL +IIN+L DI  A+ +V  Q D ELW++LI   L+KPE +  LLE+   + +   +++ +P G ++P ++  + K++ D++++  L   C  + K + +++ +KY ++ +
Sbjct:  584 PQEVIMQIHSVPQ------FLYEYFCEFELMYPNSLMEYGDLKLDVFAEFDRKRFFDFLVNTQCYSLDHAAQICKQYNYLDELVYILGRMGNNKEALMLIINELLDIGRAIRYVKEQADRELWDDLISYSLDKPEFICTLLENIGTDENARNLLSKIPPGTKLPHMKKSISKLLADHQSQVQLYQSCYKLFKNESISMAIKYREQEQ 784          
BLAST of EY753884 vs. ExPASy Swiss-Prot
Match: VPS41_CAEEL (Vacuolar protein sorting-associated protein 41 homolog OS=Caenorhabditis elegans GN=vps-41 PE=2 SV=4)

HSP 1 Score: 105.145 bits (261), Expect = 5.595e-22
Identity = 54/172 (31.40%), Postives = 93/172 (54.07%), Query Frame = 3
Query:   75 YLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADI 590
            YL  L   N   G +F D  V+LYA+YD K LLPFLR + +Y + KA ++C  +  + E +++L + GN   A+ +++ +  ++E+ +++   Q+D +LW  L+      P     L+      LDPL I++ +P+  +IP L + L K++ DY     L+  C D    D+
Sbjct:  647 YLTKLMSRN--EGTEFADKAVQLYAEYDQKKLLPFLRKNANYNVNKARKLCSDKGYIEETIYLLAKSGNHYDAVKMMVREYRNMEKVIDYCKDQNDPDLWIHLLGVVAEFPAHFSQLIIEASNCLDPLLIMDKLPDDSDIPNLSEALDKLLVDYTNHAELQQCCYDSTLNDL 816          
BLAST of EY753884 vs. ExPASy Swiss-Prot
Match: VPS41_CAEBR (Vacuolar protein sorting-associated protein 41 homolog OS=Caenorhabditis briggsae GN=vps-41 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.595e-22
Identity = 57/195 (29.23%), Postives = 106/195 (54.36%), Query Frame = 3
Query:    6 PSEVVTQLLNARDKCDSRYFLHLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADI 590
            PS V+ ++ N + K    Y   L       ++ + G +F D  V+LYAD++ K LLPFL+ + +Y + KA ++C  R  + E +F+L + GN   A+ +++ +  +IE+ + +   Q+D +LW  L++   + P     L+      LDP+ I++ +P+ ++IP L + L K++TD+     L+  C D    D+
Sbjct:  626 PSFVMAKI-NGQPKLQLAYLTKL-------MSRNEGIEFADKAVQLYADHEKKKLLPFLKKNVNYNVTKARKLCSDRGFVEETIFLLAKSGNHYEAVKMMVREYKNIEKVIAYCKDQNDRDLWIHLLEVVADFPTHFSQLIIEASNCLDPILIMDKLPDDVDIPNLSEALEKLLTDFTNYVELQQCCYDSTLNDL 812          
BLAST of EY753884 vs. ExPASy Swiss-Prot
Match: VPS41_YEAST (Vacuolar protein sorting-associated protein 41 OS=Saccharomyces cerevisiae GN=VPS41 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.512e-16
Identity = 51/182 (28.02%), Postives = 95/182 (52.20%), Query Frame = 3
Query:  120 FHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICV-KRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLD-PLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKESRRAVCLTNEEDD 659
            + +  +ELY++YD + LLPFL+   +Y +E A E+C  K  L  E +++ G++G TK AL++II++L + + A++FV    D ELWE +I   L+KP     +L  +    +  L ++  + + L+I  L+D +  I+ +      +R     I+  +      ++ K   +      +E D
Sbjct:  800 YENQLIELYSEYDRQSLLPFLQKHNNYNVESAIEVCSSKLGLYNELIYLWGKIGETKKALSLIIDELKNPQLAIDFVKNWGDSELWEFMINYSLDKPNFTKAILTCSDETSEIYLKVIRGMSDDLQIDNLQDIIKHIVQENSLSLEVRDNILVIINDETKKFANEFLKIRSQGKLFQVDESD 981          
The following BLAST results are available for this feature:
BLAST of EY753884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VPS41_SOLLC6.651e-11675.09Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_ARATH4.461e-11271.48Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_MOUSE4.703e-4544.33Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_HUMAN4.703e-4544.33Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_SCHPO1.796e-2830.92Vacuolar protein sorting-associated protein 41 OS=... [more]
VPS41_CAEEL5.595e-2231.40Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_CAEBR5.595e-2229.23Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_YEAST3.512e-1628.02Vacuolar protein sorting-associated protein 41 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-A09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753884 ID=EY753884; Name=EY753884; organism=Citrus sinensis; type=EST; length=909bp
TTACTCCATCTGAAGTTGTGACACAGCTACTCAATGCAAGGGACAAGTGT
GATTCGAGATATTTTTTGCATTTATACCTGCATGCATTATTTGAAGTAAA
TCTGCATGCTGGAAAAGATTTTCATGATATGCAGGTAGAGCTTTATGCCG
ACTATGATCTGAAGATGCTACTTCCTTTTCTTCGTAGTAGTCAGCATTAC
ACACTTGAGAAGGCATATGAAATTTGTGTGAAGAGAGATCTTTTACGGGA
GCAGGTGTTCATTCTTGGAAGAATGGGGAATACAAAACATGCCCTAGCTG
TGATCATTAATAAACTAGGGGACATAGAAGAGGCTGTAGAATTTGTTAAC
ATGCAGCATGATGACGAACTTTGGGAAGAGTTGATTAAGCAATGCCTTAA
CAAACCTGAAATGGTTGGTGTGTTGTTGGAGCACACTGTTGGCAATCTCG
ATCCTCTATATATCGTAAATATGGTGCCCAATGGCTTAGAGATTCCTCGT
CTGAGAGATCGCCTGGTGAAAATTATTACTGATTACAGGACTGAAACATC
TCTTAGACATGGGTGCAATGACATTCTGAAGGCTGATATTGTAAATCTCT
TGGTTAAGTACTACAAAGAAAGCAGGCGAGCAGTTTGCTTGACTAATGAA
GAAGATGATGCACGAGCCAAAAAGAGTGGCAGTAGGGCTTCTCANGCACC
GNAAAAGTGCCGAGTGTTAAAACCATGAGGGTAAGTCAAAAACTAGGGTG
GGTGCAGATGTTGCATGTGTTTTGATCCTTTCTCATACAAAAGTATCAGN
NATGGGTTCTTTTGCTGCATGCTAACACATGGATGGNCTTAAGATCCATG
CAACTGTTATGGGTAAAAGGGGGCTGACCACTACCGGAACCATTCAGATA
TGATTGATA
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