EY753881

Overview
NameEY753881
Unique NameEY753881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753881_ssr1 microsatellite EY753881_ssr1:1..12. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753881 vs. ExPASy Swiss-Prot
Match: K6PF7_ARATH (6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.381e-37
Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 3
Query:  597 QYFVHVDDTVPQKVCVHKDSPRGTHXRRAGPRQKVYFESNESYAGIGTWGGLCPELTTGLKR*FTS*LLD*GKKSLEIVED--QGLYAK 857
            QYFVH DD+VP+KV VHKD PRG H RRAGPRQKVYFES+E +A I T GGLCP L T ++   +S     G K +  ++   +G YAK
Sbjct:   51 QYFVHADDSVPEKVVVHKDGPRGVHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREVVSSLSYMYGVKRILGIDGGYRGFYAK 139          

HSP 2 Score: 81.2629 bits (199), Expect = 6.381e-37
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 1
Query:  451 SNNGNSQRKIVTGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVV 594
            S+  +++ KIV GP GY+L+DVPHL DY+PDLPTYPNPLQDNPAYSVV
Sbjct:    2 SSPRSNKPKIVNGPGGYILQDVPHLIDYLPDLPTYPNPLQDNPAYSVV 49          
BLAST of EY753881 vs. ExPASy Swiss-Prot
Match: K6PF3_ARATH (6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.523e-35
Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 3
Query:  597 QYFVHVDDTVPQKVCVHKDSPRGTHXRRAGPRQKVYFESNESYAGIGTWGGLCPELTTGLKR*FTS*LLD*GKKSLEIVED--QGLYAK 857
            QYFV  DD+VPQK+ VHKD PRG H RRAGPRQKVYFES+E +A I T GGLCP L T ++   +S     G K +  ++   +G YAK
Sbjct:   51 QYFVDADDSVPQKIVVHKDGPRGIHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGIDGGYRGFYAK 139          

HSP 2 Score: 79.7221 bits (195), Expect = 1.523e-35
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 1
Query:  463 NSQRKIVTGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVV 594
            +S+ KI+ G  GYVLEDVPHLSDY+P LPTYPNPLQDNPAYSVV
Sbjct:    6 SSKPKIINGSCGYVLEDVPHLSDYLPGLPTYPNPLQDNPAYSVV 49          
BLAST of EY753881 vs. ExPASy Swiss-Prot
Match: K6PF1_ARATH (6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.985e-35
Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 3
Query:  597 QYFVHVDDTVPQKVCVHKDSPRGTHXRRAGPRQKVYFESNESYAGIGTWGGLCPELTTGLK 779
            QYFV  DDTVPQK+ VH DSPRGTH RRAGPRQ+VYFES++  A I T GGLCP L T ++
Sbjct:   52 QYFVDEDDTVPQKIVVHPDSPRGTHFRRAGPRQRVYFESDDVLACIVTCGGLCPGLNTVIR 112          

HSP 2 Score: 81.6481 bits (200), Expect = 1.985e-35
Identity = 38/49 (77.55%), Postives = 41/49 (83.67%), Query Frame = 1
Query:  448 ASNNGNSQRKIVTGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVV 594
            +S+  NS RKIVTGPAGY+LEDVPH SD  PD PTYPNPLQDN AYSVV
Sbjct:    2 SSSVPNSDRKIVTGPAGYILEDVPHFSDDFPDHPTYPNPLQDNAAYSVV 50          
BLAST of EY753881 vs. ExPASy Swiss-Prot
Match: K6PF6_ARATH (6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.733e-34
Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 3
Query:  597 QYFVHVDDTVPQKVCVHKDSPRGTHXRRAGPRQKVYFESNESYAGIGTWGGLCPELTTGLK 779
            QYFV  DDTV +K+ VHKDSPRGTH RRAGPRQKVYF+ ++  A I T GGLCP L T ++
Sbjct:   52 QYFVDEDDTVQEKIVVHKDSPRGTHFRRAGPRQKVYFKPSDVRACIVTCGGLCPGLNTVIR 112          

HSP 2 Score: 81.6481 bits (200), Expect = 4.733e-34
Identity = 39/49 (79.59%), Postives = 41/49 (83.67%), Query Frame = 1
Query:  448 ASNNGNSQRKIVTGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVV 594
            ASN  + Q K+V GPAGYVLEDVPHLSDYI DLPTYPNPLQ N AYSVV
Sbjct:    2 ASNGVDEQIKLVEGPAGYVLEDVPHLSDYILDLPTYPNPLQSNAAYSVV 50          
BLAST of EY753881 vs. ExPASy Swiss-Prot
Match: K6PF4_ARATH (6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.535e-20
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 3
Query:  603 FVHVDDTVPQKVCVHKDSPRGTHXRRAGPRQKVYFESNESYAGIGTWGGLCPELTTGLK 779
            FV  +D V Q + V K S RG H RRAGPR++VYF S+E  A I T GGLCP + T ++
Sbjct:  104 FVSSEDVVAQNIVVQKGSKRGVHFRRAGPRERVYFRSDEVKACIVTCGGLCPGINTVIR 162          

HSP 2 Score: 56.225 bits (134), Expect = 1.535e-20
Identity = 21/33 (63.64%), Postives = 31/33 (93.94%), Query Frame = 1
Query:  496 GYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVV 594
            G+VLEDVPHL+ ++PDLP+YPNPL+++ AY++V
Sbjct:   68 GFVLEDVPHLTKFLPDLPSYPNPLKESQAYAIV 100          
The following BLAST results are available for this feature:
BLAST of EY753881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
K6PF7_ARATH6.381e-3756.186-phosphofructokinase 7 OS=Arabidopsis thaliana GN... [more]
K6PF3_ARATH1.523e-3555.066-phosphofructokinase 3 OS=Arabidopsis thaliana GN... [more]
K6PF1_ARATH1.985e-3568.856-phosphofructokinase 1 OS=Arabidopsis thaliana GN... [more]
K6PF6_ARATH4.733e-3465.576-phosphofructokinase 6 OS=Arabidopsis thaliana GN... [more]
K6PF4_ARATH1.535e-2052.546-phosphofructokinase 4, chloroplastic OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-A05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753881 ID=EY753881; Name=EY753881; organism=Citrus sinensis; type=EST; length=898bp
ATTATTATTATTTTTTTTCTCAATAATACCATTTTTTTTTATTTGTGCGG
TCTGAAAACCACTAACAAAAAACTGTTAAAACAAGGCATAAGCCACCCGT
TTCGTTTCTTGCGTACACTTTTCGCACAAAACAGCCTTTCAAAACCAACT
AAACATTTACGTAGCTGTTTCTAATTTTTTTAATTTTTTCTTTTACTTTG
GTCAAAAACACTCTGGTTCTTGCTTGTTTCCTATAAATATGGATTCCTAT
TGTTCGTTTTCTTTTGAATGGACTCAGTAGCTCTATCATCACCCTCACCA
TCACCCTCAACTTCAACTTCTTCTTTGAAATCGCGTTTCCTGCAAAAGCC
TTCCCAGAACTCGAAGCAGTTGTTATCTTCGGTCAGTTTTAGTTCGAGTT
CGTGTTCCGATTTTCGATCTCCGACAAAAGCTATTTCGATGGCGGCGGCA
TCCAACAATGGAAACTCACAGCGAAAGATTGTGACTGGTCCTGCTGGTTA
TGTTCTTGAAGATGTTCCTCATTTGTCTGATTATATCCCCGATCTTCCTA
CATATCCGAATCCGCTGCAAGACAATCCTGCATATTCTGTTGTTAGCAAT
ATTTTGTTCATGTGGATGACACGGTACCACAAAAGGTTTGTGTTCATAAG
GATAGTCCAAGAGGGACTCACTTNCGAAGAGCTGGACCTCGTCAAAAGGT
GTATTTTGAGTCAAATGAAAGTTATGCTGGTATCGGGACATGGGGTGGGC
TATGCCCTGAACTCACCACGGGATTAAAGAGATAGTTTACGTCTTAACTA
CTTGATTGAGGAAAAAAAAGCTTGGAAATTGTGGAGGATCAGGGGCTTTA
TGCTAAAAAACAATGGCTAACCCTAAGGGGGGGATGACTCCAAAACGG
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