EY753868

Overview
NameEY753868
Unique NameEY753868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3893 contig Csv1_Contig3893:250..1125. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.057e-54
Identity = 119/279 (42.65%), Postives = 167/279 (59.86%), Query Frame = 1
Query:   31 LGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHVLYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGRTLDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQXXXXXXXXXXXXXXETLLLGRGAIGTTFIKGMPLTLHFWXWEGGEVLT-QGGQ 864
            LGE L G EL  S +DIKF+ +V  A+ C +DLD+ K   F  AI+N+YW++ ++DDLP+WG VG+   D+N ++  + L+T+K +   +N ++I+ VNLT +G   L     + M+YSVKW  ++V F  RFD YLD  FF+H+IHWFSIFNSFMMVIFL GLVSMILMRTL  DYA+Y+            + +E GWK  HGDVF P  + ++ S ++ +G Q              E L   RG++ +T I     T     + GG +   QGG+
Sbjct:   80 LGEALQGVELEFSGLDIKFKDDVMPATYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEA--DENGED--YYLWTYKKLEIGFNGNRIVDVNLTSEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYS-KEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHPLIFSSLIGSGCQIFAVSLIVIIVAMIEDLYTERGSMLSTAIFVYAATSPVNGYFGGSLYARQGGR 353          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.075e-54
Identity = 118/279 (42.29%), Postives = 166/279 (59.50%), Query Frame = 1
Query:   31 LGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHVLYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGRTLDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQXXXXXXXXXXXXXXETLLLGRGAIGTTFIKGMPLTLHFWXWEGGEVLT-QGGQ 864
            LGE L G EL  S +DIKF+ +V   + C +DLD+ K   F  AI+N+YW++ ++DDLP+WG VG+   D+N ++  + L+T+K +   +N ++I+ VNLT +G   L     + M+YSVKW  ++V F  RFD YLD  FF+H+IHWFSIFNSFMMVIFL GLVSMILMRTL  DYA+Y+            + +E GWK  HGDVF P  + ++ S ++ +G Q              E L   RG++ +T I     T     + GG +   QGG+
Sbjct:   78 LGEALQGVELEFSGLDIKFKDDVMPGTYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEA--DENGED--YYLWTYKKLEIGFNGNRIVDVNLTSEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYS-KEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHPLIFSSLIGSGCQIFAVSLIVIIVAMIEDLYTERGSMLSTAIFVYAATSPVNGYFGGSLYARQGGR 351          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.298e-36
Identity = 80/220 (36.36%), Postives = 124/220 (56.36%), Query Frame = 1
Query:   31 LGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHVLYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGR----TLDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDV--FPPPRNL 672
            LGE L G+  + S     F+ + +   +C   L +  +++FK AI   Y+ E   DDLP++ FVG +  D +  N ++ LY H    F YN DQ+I VN+  +  K +E+      TL +TYS KW PT   F++R D+Y ++   E +IHW S+ NSF +V+ LT  +++++M+ L NDY++Y+              E+ GWKL HGDV  FPP +N+
Sbjct:   72 LGEILQGDSAVLSDYQFPFKSSFENKQLCEYTLKKEDIEKFKKAIGEYYYAEMIYDDLPIFSFVGTVD-DSDLTNIRYYLYNHIPFEFDYNGDQVIRVNIDTEHIKVIELSDQDEITLKLTYSAKWQPTEHEFSKRMDLYEEFFTKELEIHWLSVMNSFFLVVLLTAFLAIMIMKILKNDYSRYS---KTDEEEDSDYQEDYGWKLVHGDVFRFPPYKNV 287          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S1_BOVIN (Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.800e-31
Identity = 93/244 (38.11%), Postives = 133/244 (54.51%), Query Frame = 1
Query:   31 LGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNL--------TQDGPKPLEVGRTLDMTYSVKWTPTNV---TFARRFDVYLDYPFFEH--QIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEES--GWKLCHGDV--FPPPRNLVVLSXVVSTGAQ 708
            LGE L G+ +  S  +I+F+ NV+K  +C + L  A+V+Q + AIE  Y+FEF +DDLP+ GFVG +       +   + L+TH   + +++ D+II  N+        + DG +P E    L  TYSV+W+ T+V   +  RR D   D  FF    +IHW SI NS ++V  L G V++ILMR L ND A+Y               ++S  GWK+ H DV  FPP R L  L  V+  GAQ
Sbjct:   79 LGEVLDGDRMAESLYEIRFRENVEKRVLCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRPDEF-LGLTHTYSVRWSETSVERRSDRRRGD---DGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETASAGSGDDFDQSDNGWKIIHTDVFRFPPYRGL--LCAVLGVGAQ 316          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.777e-31
Identity = 90/243 (37.04%), Postives = 131/243 (53.91%), Query Frame = 1
Query:   31 LGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGRT-------LDMTYSVKWTPTNV---TFARRFDVYLDYPFFEH--QIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSE--ESGWKLCHGDV--FPPPRNLVVLSXVVSTGAQ 708
            LGE L G+ +  S  +I+F+ NV+K  +C + L  A+V+Q + AIE  Y+FEF +DDLP+ GFVG +       +   + L+TH   + +++ D+II  N++    KP  +          L  TYSV+W+ T+V   +  RR D   D  FF    +IHW SI NS ++V  L G V++ILMR L ND A+Y               +  ++GWK+ H DV  FPP R L  L  V+  GAQ
Sbjct:   79 LGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSETSVEHRSDRRRAD---DGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSSDDFDQGDNGWKIIHTDVFRFPPCRGL--LCAVLGVGAQ 316          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S1_MOUSE (Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.239e-31
Identity = 90/243 (37.04%), Postives = 131/243 (53.91%), Query Frame = 1
Query:   31 LGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGRT-------LDMTYSVKWTPTNV---TFARRFDVYLDYPFFEH--QIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSE--ESGWKLCHGDV--FPPPRNLVVLSXVVSTGAQ 708
            LGE L G+ +  S  +I+F+ NV+K  +C + L  A+V+Q + AIE  Y+FEF +DDLP+ GFVG +       +   + L+TH   + +++ D+II  N++    KP  +          L  TYSV+W+ T+V   +  RR D   D  FF    +IHW SI NS ++V  L G V++ILMR L ND A+Y               +  ++GWK+ H DV  FPP R L  L  V+  GAQ
Sbjct:   79 LGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSETSVEHRSDRRRGD---DGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSSDDFDQGDNGWKIIHTDVFRFPPYRGL--LCAVLGVGAQ 316          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S1_HUMAN (Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.239e-31
Identity = 92/244 (37.70%), Postives = 133/244 (54.51%), Query Frame = 1
Query:   31 LGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNL--------TQDGPKPLEVGRTLDMTYSVKWTPTNV---TFARRFDVYLDYPFFEH--QIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSE--ESGWKLCHGDV--FPPPRNLVVLSXVVSTGAQ 708
            LGE L G+ +  S  +I+F+ NV+K  +C + L  A+V+Q + AIE  Y+FEF +DDLP+ GFVG +       +   + L+TH   + +++ D+II  N+        + DG +P E    L  TYSV+W+ T+V   +  RR D   D  FF    +IHW SI NS ++V  L G V++ILMR L ND A+Y               +  ++GWK+ H DV  FPP R L  L  V+  GAQ
Sbjct:   79 LGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRPDEF-LGLTHTYSVRWSETSVERRSDRRRGD---DGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIHTDVFRFPPYRGL--LCAVLGVGAQ 316          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S1_PONAB (Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.096e-30
Identity = 91/242 (37.60%), Postives = 130/242 (53.72%), Query Frame = 1
Query:   31 LGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNLTQDGPKP-----LEVGRTLDMT--YSVKWTPTNVTFARRFDVYL--DYPFFEH--QIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSE--ESGWKLCHGDV--FPPPRNLVVLSXVVSTGAQ 708
            LGE L G+ +  S  +I+F+ NV+K  +C + L  A+V+Q + AIE  Y+FEF +DDLP+ GFVG +       +   + L+TH   + ++  D+II  N++    KP     L     L +T  YSV+W+ T+V   RR D     D  FF    +IHW SI NS ++V  L G V++ILMR L ND A+Y               +  ++GWK+ H DV  FPP R L  L  V+  GAQ
Sbjct:   79 LGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFRGDRIIFANVSVRDVKPHSLDGLRPDEFLGLTHAYSVRWSETSV--ERRSDRRHGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIHTDVFRFPPYRGL--LCAVLGVGAQ 316          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: YON8_SCHPO (Transmembrane 9 superfamily protein C1105.08 OS=Schizosaccharomyces pombe GN=SPBC1105.08 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.224e-20
Identity = 83/267 (31.09%), Postives = 123/267 (46.07%), Query Frame = 1
Query:   13 ARPTRPLGEFLGGNELIASQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVG-------DLHPD----KNSDNGKHVLYTHKIINFKYN---KDQ----------IIHVNLTQDG---------PKPLEVGR--TLDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            A+ +  LG  L G+ L  S I+IK   N D   +C+  +  + V   +D I  NY   + +D+LP+  ++         L P     KN++ G  +L+ H  I  +Y+    DQ          +   +   DG         P+ L  G   TL  +YSV W  ++  +A R+D Y+       QI W  I +S ++  FL  +VS+IL RTL  D  KY             V E+ GWKL HGDVF PPR  ++ S ++ TGAQ
Sbjct:   81 AKQSESLGSVLFGDRLYNSPIEIKMLENQDCVPLCASIIPSSDVSFIRDLISKNYVVNWNIDNLPVATYLEGTNSKNYSLSPGFPLGKNTEKGV-ILFNHYDIVIEYHTTSSDQHRVVGAYVKPVSKESTLVDGNPVCSSSSNPQYLPEGADLTLVTSYSVSWKYSDTPWATRWDKYMHIE--SRQIRWIFIIHSAIIDTFLIFVVSIILYRTLNRDINKY----NSAFVDQEDVQEDFGWKLVHGDVFRPPRRPMLFSILLGTGAQ 340          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20
Identity = 59/161 (36.65%), Postives = 86/161 (53.42%), Query Frame = 1
Query:  271 YTHKIINFKYNKDQIIHVNLTQD-----------GPKPLEVGRT----LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            +T++++ F+     I   +L  D              P E+  T    L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTL  D A Y               EESGWKL HGDVF PP+  ++LS ++ +G Q
Sbjct:  200 HTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQ 353          
The following BLAST results are available for this feature:
BLAST of EY753868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TM9S3_HUMAN1.057e-5442.65Transmembrane 9 superfamily member 3 OS=Homo sapie... [more]
TM9S3_MOUSE3.075e-5442.29Transmembrane 9 superfamily member 3 OS=Mus muscul... [more]
PHG1B_DICDI1.298e-3636.36Putative phagocytic receptor 1b OS=Dictyostelium d... [more]
TM9S1_BOVIN2.800e-3138.11Transmembrane 9 superfamily member 1 OS=Bos taurus... [more]
TM9S1_RAT4.777e-3137.04Transmembrane 9 superfamily member 1 OS=Rattus nor... [more]
TM9S1_MOUSE6.239e-3137.04Transmembrane 9 superfamily member 1 OS=Mus muscul... [more]
TM9S1_HUMAN6.239e-3137.70Transmembrane 9 superfamily member 1 OS=Homo sapie... [more]
TM9S1_PONAB3.096e-3037.60Transmembrane 9 superfamily member 1 OS=Pongo abel... [more]
YON8_SCHPO2.224e-2031.09Transmembrane 9 superfamily protein C1105.08 OS=Sc... [more]
TM9S4_PONAB8.452e-2036.65Transmembrane 9 superfamily member 4 OS=Pongo abel... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-H02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753868 ID=EY753868; Name=EY753868; organism=Citrus sinensis; type=EST; length=876bp
CCGGNATTCAAAGCTCGACCCACGCGTCCGCTTGGTGAGTTCCTGGGTGG
AAATGAACTTATTGCCAGTCAAATAGACATAAAGTTCCAAAGGAATGTTG
ACAAAGCCTCCATCTGTTCATTGGATCTTGATGAGGCAAAGGTCAAACAA
TTCAAAGATGCAATTGAGAACAATTATTGGTTTGAATTCTTCTTGGATGA
TCTGCCTTTATGGGGCTTTGTTGGTGATCTGCATCCTGATAAGAACAGTG
ATAATGGGAAGCACGTCCTCTACACACACAAGATTATAAATTTTAAATAC
AATAAAGATCAGATTATTCATGTTAATCTCACTCAAGACGGCCCAAAGCC
TCTGGAAGTTGGGAGGACACTGGACATGACATACTCAGTCAAATGGACTC
CAACTAATGTCACTTTTGCGCGTCGTTTTGATGTATATTTGGACTACCCT
TTCTTTGAGCACCAGATCCATTGGTTCTCCATTTTCAATTCTTTCATGAT
GGTTATCTTCCTCACTGGTTTGGTATCAATGATATTGATGCGGACTCTTA
NAAATGATTATGCCAAGTATGCACGGGAAGATGATGATCTANAGACTTTG
GAAAGAGATGTGAGTGAGGAATCTGGTTGGAAACTTTGTCATGGGGATGT
TTTTCCGCCTCCTCGTAATTTGGTTGTCCTTTCANCTGTTGTAAGCACTG
GTGCACAGCTTGCATTGCTCGTTCTACTCCGTATTCTGATGGCAATTGTG
GAAACTTTGTTATTGGGGAGAGGAGCCATTGGGACTACTTTTATAAAAGG
NATGCCTCTAACTCTTCATTTCTGGNTTTGGGAGGGGGGGGAAGTCCTCA
CCCAAGGGGGGCAAAACGGGTAAAAT
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