EY753852

Overview
NameEY753852
Unique NameEY753852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11965 contig Csv1_Contig11965:368..1207. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753852 vs. ExPASy Swiss-Prot
Match: VPS41_SOLLC (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum GN=VPS41 PE=2 SV=1)

HSP 1 Score: 429.869 bits (1104), Expect = 8.780e-120
Identity = 209/264 (79.17%), Postives = 234/264 (88.64%), Query Frame = 3
Query:    9 SEVVTQLLNARDKCDSRYFLHLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAVCLTNEEDDARAKRVGSRASQATEKVPSVRTRXVKSKTRGGCRCCMCFDPFSYKSI 800
            SEVV+QL+ ARDKCD RYFLHLYLH+LFEVNLHAGKD+HDMQVELYADYD KMLL FLRSSQHYTLEKAYEICVK+DLL+EQVFILGRMGN K ALAVIIN+LGDIEEA+EFV+MQ DDELWEELI+Q  +KPEMVGVLLEHTVGNLDPLYIVNM+PN LEIPRLRDRLVKI+TDYRTETSLRHGCNDILKAD VNLLVKYYKEA+R VCL++E DD  ++R     S   E+  S+++  VKSKTRGG RCC+CFDPFS  ++
Sbjct:  617 SEVVSQLIAARDKCDYRYFLHLYLHSLFEVNLHAGKDYHDMQVELYADYDPKMLLTFLRSSQHYTLEKAYEICVKKDLLKEQVFILGRMGNAKQALAVIINRLGDIEEAIEFVSMQQDDELWEELIQQSFHKPEMVGVLLEHTVGNLDPLYIVNMLPNDLEIPRLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYKEAKRGVCLSDEVDDVSSRRGEKSVSHLGERTMSLKSVEVKSKTRGGGRCCICFDPFSILNV 880          
BLAST of EY753852 vs. ExPASy Swiss-Prot
Match: VPS41_ARATH (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana GN=VPS41 PE=2 SV=3)

HSP 1 Score: 416.772 bits (1070), Expect = 7.692e-116
Identity = 204/262 (77.86%), Postives = 226/262 (86.26%), Query Frame = 3
Query:   24 QLLNARDKCDSRYFLHLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAVCLTNEEDDARAKRVGSRAS-----QATEKVPSVRTRXVKSKTRGGCRCCMCFDPFSYK 794
            Q+L A  KCDSRY+L+LYLHALFEV+   GKDFHDMQVELYA+YD KMLLPFLRSSQHY LEKAYE+CVK+D LREQVF+LGRMGN K ALAVIINKLGDIEEAVEFV+MQHDD+LWEELIKQCLNKPEMVG+LLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKI+TDYRTETSLRHGCNDILK DIVNLLVK + EARR VCL++E+DD+RAKR  +  S        +K  S++   VKSKTRG  RCCMCFDP S +
Sbjct:  637 QVLKAGKKCDSRYYLYLYLHALFEVSHDTGKDFHDMQVELYAEYDTKMLLPFLRSSQHYKLEKAYELCVKKDFLREQVFVLGRMGNAKQALAVIINKLGDIEEAVEFVSMQHDDDLWEELIKQCLNKPEMVGLLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIVTDYRTETSLRHGCNDILKTDIVNLLVKCFNEARRGVCLSHEDDDSRAKREDNNRSSFSQRMVVDKSLSIKMTEVKSKTRGDTRCCMCFDPVSIR 898          
BLAST of EY753852 vs. ExPASy Swiss-Prot
Match: VPS41_MOUSE (Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus GN=Vps41 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.439e-45
Identity = 86/194 (44.33%), Postives = 129/194 (66.49%), Query Frame = 3
Query:   69 HLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAVCLTNE 650
            H+YLH LF+ + H G+ +H+ Q+ LYA+YD   LLPFLR S H  LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF   Q D ELWE+LI   ++KP  +  LL +   ++DP+ +++ +  G+EIP LRD LVKI+ DY  +  LR GC  IL AD ++LL K ++   + V +  E
Sbjct:  594 HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEE 787          
BLAST of EY753852 vs. ExPASy Swiss-Prot
Match: VPS41_HUMAN (Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens GN=VPS41 PE=2 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 5.439e-45
Identity = 86/194 (44.33%), Postives = 129/194 (66.49%), Query Frame = 3
Query:   69 HLYLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAVCLTNE 650
            H+YLH LF+ + H G+ +H+ Q+ LYA+YD   LLPFLR S H  LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF   Q D ELWE+LI   ++KP  +  LL +   ++DP+ +++ +  G+EIP LRD LVKI+ DY  +  LR GC  IL AD ++LL K ++   + V +  E
Sbjct:  595 HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEE 788          
BLAST of EY753852 vs. ExPASy Swiss-Prot
Match: VPS41_SCHPO (Vacuolar protein sorting-associated protein 41 OS=Schizosaccharomyces pombe GN=vps41 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.626e-28
Identity = 57/168 (33.93%), Postives = 109/168 (64.88%), Query Frame = 3
Query:  117 DFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKE 620
            ++ D++++++A++D K    FL ++Q Y+L+ A +IC + + L E V+ILGRMGN K AL +IIN+L DI  A+ +V  Q D ELW++LI   L+KPE +  LLE+   + +   +++ +P G ++P ++  + K++ D++++  L   C  + K + +++ +KY ++
Sbjct:  615 EYGDLKLDVFAEFDRKRFFDFLVNTQCYSLDHAAQICKQYNYLDELVYILGRMGNNKEALMLIINELLDIGRAIRYVKEQADRELWDDLISYSLDKPEFICTLLENIGTDENARNLLSKIPPGTKLPHMKKSISKLLADHQSQVQLYQSCYKLFKNESISMAIKYREQ 782          
BLAST of EY753852 vs. ExPASy Swiss-Prot
Match: VPS41_CAEEL (Vacuolar protein sorting-associated protein 41 homolog OS=Caenorhabditis elegans GN=vps-41 PE=2 SV=4)

HSP 1 Score: 105.145 bits (261), Expect = 4.954e-22
Identity = 54/172 (31.40%), Postives = 93/172 (54.07%), Query Frame = 3
Query:   75 YLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADI 590
            YL  L   N   G +F D  V+LYA+YD K LLPFLR + +Y + KA ++C  +  + E +++L + GN   A+ +++ +  ++E+ +++   Q+D +LW  L+      P     L+      LDPL I++ +P+  +IP L + L K++ DY     L+  C D    D+
Sbjct:  647 YLTKLMSRN--EGTEFADKAVQLYAEYDQKKLLPFLRKNANYNVNKARKLCSDKGYIEETIYLLAKSGNHYDAVKMMVREYRNMEKVIDYCKDQNDPDLWIHLLGVVAEFPAHFSQLIIEASNCLDPLLIMDKLPDDSDIPNLSEALDKLLVDYTNHAELQQCCYDSTLNDL 816          
BLAST of EY753852 vs. ExPASy Swiss-Prot
Match: VPS41_CAEBR (Vacuolar protein sorting-associated protein 41 homolog OS=Caenorhabditis briggsae GN=vps-41 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.470e-22
Identity = 54/172 (31.40%), Postives = 96/172 (55.81%), Query Frame = 3
Query:   75 YLHALFEVNLHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADI 590
            YL  L   N   G +F D  V+LYAD++ K LLPFL+ + +Y + KA ++C  R  + E +F+L + GN   A+ +++ +  +IE+ + +   Q+D +LW  L++   + P     L+      LDP+ I++ +P+ ++IP L + L K++TD+     L+  C D    D+
Sbjct:  643 YLTKLMSRN--EGIEFADKAVQLYADHEKKKLLPFLKKNVNYNVTKARKLCSDRGFVEETIFLLAKSGNHYEAVKMMVREYKNIEKVIAYCKDQNDRDLWIHLLEVVADFPTHFSQLIIEASNCLDPILIMDKLPDDVDIPNLSEALEKLLTDFTNYVELQQCCYDSTLNDL 812          
BLAST of EY753852 vs. ExPASy Swiss-Prot
Match: VPS41_YEAST (Vacuolar protein sorting-associated protein 41 OS=Saccharomyces cerevisiae GN=VPS41 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.110e-16
Identity = 51/182 (28.02%), Postives = 95/182 (52.20%), Query Frame = 3
Query:  120 FHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICV-KRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLD-PLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAVCLTNEEDD 659
            + +  +ELY++YD + LLPFL+   +Y +E A E+C  K  L  E +++ G++G TK AL++II++L + + A++FV    D ELWE +I   L+KP     +L  +    +  L ++  + + L+I  L+D +  I+ +      +R     I+  +      ++ K   +      +E D
Sbjct:  800 YENQLIELYSEYDRQSLLPFLQKHNNYNVESAIEVCSSKLGLYNELIYLWGKIGETKKALSLIIDELKNPQLAIDFVKNWGDSELWEFMINYSLDKPNFTKAILTCSDETSEIYLKVIRGMSDDLQIDNLQDIIKHIVQENSLSLEVRDNILVIINDETKKFANEFLKIRSQGKLFQVDESD 981          
The following BLAST results are available for this feature:
BLAST of EY753852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VPS41_SOLLC8.780e-12079.17Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_ARATH7.692e-11677.86Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_MOUSE5.439e-4544.33Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_HUMAN5.439e-4544.33Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_SCHPO4.626e-2833.93Vacuolar protein sorting-associated protein 41 OS=... [more]
VPS41_CAEEL4.954e-2231.40Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_CAEBR6.470e-2231.40Vacuolar protein sorting-associated protein 41 hom... [more]
VPS41_YEAST3.110e-1628.02Vacuolar protein sorting-associated protein 41 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-F08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753852 ID=EY753852; Name=EY753852; organism=Citrus sinensis; type=EST; length=840bp
TTACTCTTTCTGAAGTTGTGACACAGCTACTCAATGCAAGGGACAAGTGT
GATTCGAGATATTTTTTGCATTTATACCTGCATGCATTATTTGAAGTAAA
TCTGCATGCTGGAAAAGATTTTCATGATATGCAGGTAGAGCTTTATGCCG
ACTATGATCTGAAGATGCTACTTCCTTTTCTTCGTAGTAGTCAGCATTAC
ACACTTGAGAAGGCATATGAAATTTGTGTGAAGAGAGATCTTTTACGGGA
GCAGGTGTTCATTCTTGGAAGAATGGGGAATACAAAACATGCCCTAGCTG
TGATCATTAATAAACTAGGGGACATAGAAGAGGCTGTAGAATTTGTTAAC
ATGCAGCATGATGACGAACTTTGGGAAGAGTTGATTAAGCAATGCCTTAA
CAAACCTGAAATGGTTGGTGTGTTGTTGGAGCACACTGTTGGCAATCTCG
ATCCTCTATATATCGTAAATATGGTGCCCAATGGCTTAGAGATTCCTCGT
CTGAGAGATCGCCTGGTGAAAATTATTACTGATTACAGGACTGAAACATC
TCTTAGACATGGGTGCAATGACATTCTGAAGGCTGATATTGTAAATCTCT
TGGTTAAGTACTACAAAGAAGCAAGGCGAGCAGTTTGCTTGACTAATGAA
GAAGATGATGCACGAGCAAAAAGAGTTGGCAGTAGGGCTTCTCAGGCAAC
CGAAAAAGTGCCGAGTGTTAGAACCAGGNNAGTTAAGTCAAAAACTAGGG
GTGGGTGCAGATGTTGCATGTGTTTTGATCCTTTCTCATACAAAAGTATA
AGNAATTGGGTTCTTTTGCTGGCATGCTAATACATGGATT
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