EY753836

Overview
NameEY753836
Unique NameEY753836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753836_ssr627 microsatellite EY753836_ssr627:627..641. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS_MESCR (Delta-1-pyrroline-5-carboxylate synthetase OS=Mesembryanthemum crystallinum GN=P5CS PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.112e-48
Identity = 97/165 (58.79%), Postives = 118/165 (71.52%), Query Frame = 1
Query:   22 SARKVPYEDSSGISWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLW--VKQVGAREMAVPAPESSTRFQALLSQDGRKILVDV 510
            S RK PYEDSSGI WDNDS                 SDV+GLY+GPPS+P SKLI TY++ KHQ E+TFGDKSR+GRGGMTAKV         GIPV+I SG A D+IIKV++G+ VGTLFH+DAHLW  VK+ G R+MAV A ESS R QA+ S++ +KIL+D+
Sbjct:  157 STRKAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVDGLYNGPPSDPRSKLISTYVKEKHQGEITFGDKSRLGRGGMTAKVKAAVYAAYAGIPVIIASGKATDNIIKVIDGQCVGTLFHKDAHLWVQVKETGVRDMAVAARESSRRLQAVSSEERKKILLDI 321          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS_ACTDE (Delta-1-pyrroline-5-carboxylate synthetase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.227e-48
Identity = 101/165 (61.21%), Postives = 115/165 (69.70%), Query Frame = 1
Query:   22 SARKVPYEDSSGISWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLW--VKQVGAREMAVPAPESSTRFQALLSQDGRKILVDV 510
            S RK PYED+SGI WDNDS                 SDVEGLYSGPPS+P SKLIHTYI+   +  +TFGDKSRVGRGGMTAKV         GIPVVITSG+A ++IIKVL+G+R+GTLFHRDA  W  V  VGAR+MAV A ESS R QA+  QD  KIL+DV
Sbjct:  160 STRKAPYEDASGIFWDNDSLAALLALELKADLLVLLSDVEGLYSGPPSDPQSKLIHTYIKEMFEGLITFGDKSRVGRGGMTAKVKAAVYAAHAGIPVVITSGYATNNIIKVLQGERIGTLFHRDAQKWAPVGDVGARDMAVAARESSRRLQAMSPQDRSKILLDV 324          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS1_ARATH (Delta-1-pyrroline-5-carboxylate synthetase A OS=Arabidopsis thaliana GN=P5CSA PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.606e-47
Identity = 95/165 (57.58%), Postives = 117/165 (70.91%), Query Frame = 1
Query:   22 SARKVPYEDSSGISWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLW--VKQVGAREMAVPAPESSTRFQALLSQDGRKILVDV 510
            S R+ PY+DSSGI WDNDS                 SDVEGLY+GPPS+PNSKLIHT+++ KHQ E+TFGDKSR+GRGGMTAKV         GIPV+ITSG++ ++I KVL G RVGTLFH+DA LW  +    AR+MAV A ESS + QAL S+D +KIL+D+
Sbjct:  160 STRRAPYQDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPNSKLIHTFVKEKHQDEITFGDKSRLGRGGMTAKVKAAVNAAYAGIPVIITSGYSAENIDKVLRGLRVGTLFHQDARLWAPITDSNARDMAVAARESSRKLQALSSEDRKKILLDI 324          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS_ORYSJ (Delta-1-pyrroline-5-carboxylate synthetase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47
Identity = 97/165 (58.79%), Postives = 114/165 (69.09%), Query Frame = 1
Query:   22 SARKVPYEDSSGISWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLW--VKQVGAREMAVPAPESSTRFQALLSQDGRKILVDV 510
            S RK PYEDSSGI WDNDS                 SDV+GLYSGPPSEP+SK+IHTYI+ KHQ E+TFGDKSRVGRGGMTAKV         G PVVITSGF   SI+KVL G+++GTLFH++A+LW   K V  REMAV A + S   Q L S++ +KIL+DV
Sbjct:  160 STRKAPYEDSSGIFWDNDSLAGLLALELKADLLILLSDVDGLYSGPPSEPSSKIIHTYIKEKHQQEITFGDKSRVGRGGMTAKVKAAVLASNSGTPVVITSGFENRSILKVLHGEKIGTLFHKNANLWESSKDVSTREMAVAARDCSRHLQNLSSEERKKILLDV 324          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS_VIGAC (Delta-1-pyrroline-5-carboxylate synthetase OS=Vigna aconitifolia PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.167e-46
Identity = 97/165 (58.79%), Postives = 113/165 (68.48%), Query Frame = 1
Query:   22 SARKVPYEDSSGISWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLW--VKQVGAREMAVPAPESSTRFQALLSQDGRKILVDV 510
            S RK PYEDSSGI WDNDS                 SDVEGLYSGPPS+P+SKLI+TY + KHQ E+TFGDKSRVGRGGMTAKV         GIPVVITSGFA ++II VL+G+R+GTLFH+DAH W  VK+V AREMAV A       +  L + G KIL+ +
Sbjct:  161 STRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSGPPSDPHSKLIYTYNKEKHQNEITFGDKSRVGRGGMTAKVKAAVHAAEAGIPVVITSGFAPENIINVLQGQRIGTLFHKDAHEWAQVKEVDAREMAVAAGNVREGSRRYLQRKGNKILLKI 325          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS_SOLLC (Delta-1-pyrroline-5-carboxylate synthetase OS=Solanum lycopersicum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.375e-45
Identity = 96/165 (58.18%), Postives = 112/165 (67.88%), Query Frame = 1
Query:   22 SARKVPYEDSSGISWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLW--VKQVGAREMAVPAPESSTRFQALLSQDGRKILVDV 510
            S R+ PYEDSSGI WDNDS                 SDV+GLYSGPP +P+SKLI+TYI+  H+  +TFGDKSRVGRGGMTAKV         GIPVVITSGFA D+IIKVL G+R+GTLFH DA+ W  + +  AREMAV A   S R QAL SQ+  KIL D+
Sbjct:  160 STRRAPYEDSSGIFWDNDSLAALLALELKADLLVLLSDVDGLYSGPPRDPDSKLIYTYIKEIHERVITFGDKSRVGRGGMTAKVKAAMYAAYAGIPVVITSGFATDNIIKVLHGERIGTLFHCDANKWASIGETDAREMAVAARACSRRLQALSSQERSKILQDI 324          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS2_ARATH (Delta-1-pyrroline-5-carboxylate synthetase B OS=Arabidopsis thaliana GN=P5CSB PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.745e-45
Identity = 91/165 (55.15%), Postives = 115/165 (69.70%), Query Frame = 1
Query:   22 SARKVPYEDSSGISWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLW--VKQVGAREMAVPAPESSTRFQALLSQDGRKILVDV 510
            S R+ PY+DS+GI WDNDS                 SDVEGLY+GPPS+  SKLIHT+I+ KHQ E+TFG+KS++GRGGMTAKV         G+PV+ITSG+A ++I KVL G RVGTLFH+DAHLW  V    +R+MAV A ESS + QAL S+D ++IL D+
Sbjct:  160 STRRAPYKDSTGIFWDNDSLAALLSLELKADLLILLSDVEGLYTGPPSDSTSKLIHTFIKEKHQDEITFGEKSKLGRGGMTAKVKAAVNAAYGGVPVIITSGYAAENISKVLRGLRVGTLFHQDAHLWAPVVDTTSRDMAVAARESSRKLQALSSEDRKQILHDI 324          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 1
Query:   67 DNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSIIKVLEGKRVGTLF 384
            DNDS                 S+V G+Y+GPP    S+L++TY+ +++   VTFG  S+ G GGM +KV         G+  VIT+G A D+I   + GK++GT+F
Sbjct:  239 DNDSLAARLSAEIEAELLIILSNVNGVYTGPPDLEGSRLLYTYVPSENSG-VTFGANSKFGTGGMESKVTACVNALNNGVTTVITNGLAQDAITDAVAGKKIGTMF 343          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS_PONAB (Delta-1-pyrroline-5-carboxylate synthetase OS=Pongo abelii GN=ALDH18A1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.423e-11
Identity = 59/166 (35.54%), Postives = 76/166 (45.78%), Query Frame = 1
Query:   37 PYEDSSGISW----DNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG----FAMDSIIKVLEGKRVGTLFH--RDAHLWVKQVGAREMAVPAPESSTRFQALLSQDGRKILV 504
            P  D  G++     DNDS                 SDVEGL+  PP   ++KLI  +     Q+ VTFG KSRVG GGM AKV         G  VVI +G     +   I  ++EGK+VGT F   + A   V+Q G  EMA     S  R  A L  + R  ++
Sbjct:  231 PNSDLQGVNVISVKDNDSLAARLAVEMKTDLLIVLSDVEGLFDSPPGSDDAKLIDIFYPGDQQS-VTFGTKSRVGMGGMEAKVKAALWALQGGTSVVIANGTHPKVSGHVITDIVEGKKVGTFFSEVKPAGPTVEQQG--EMA----RSGGRMLATLEPEQRAEII 389          
BLAST of EY753836 vs. ExPASy Swiss-Prot
Match: P5CS_MOUSE (Delta-1-pyrroline-5-carboxylate synthetase OS=Mus musculus GN=Aldh18a1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.423e-11
Identity = 59/167 (35.33%), Postives = 77/167 (46.11%), Query Frame = 1
Query:   37 PYEDSSGISW----DNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEVTFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG----FAMDSIIKVLEGKRVGTLFH--RDAHLWVKQVGAREMAVPAPESSTRFQALLSQDGRKILVD 507
            P  D  G++     DNDS                 SDVEGL+  PP   ++KLI  +     Q+ VTFG KSRVG GGM AKV         G  VVI +G     +   I  ++EGK+VGT F   + A   V+Q G  EMA     S  R  A L  + R  +++
Sbjct:  231 PNSDLQGVNVISVKDNDSLAARLAVEMKTDLLIVLSDVEGLFDSPPGSDDAKLIDIFYPGDQQS-VTFGTKSRVGLGGMEAKVKAALWALQGGTSVVIANGTHPKVSGHVITDIVEGKKVGTFFSEVKPAGPTVEQQG--EMA----RSGGRMLATLEPEQRAEIIN 390          
The following BLAST results are available for this feature:
BLAST of EY753836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
P5CS_MESCR1.112e-4858.79Delta-1-pyrroline-5-carboxylate synthetase OS=Mese... [more]
P5CS_ACTDE4.227e-4861.21Delta-1-pyrroline-5-carboxylate synthetase OS=Acti... [more]
P5CS1_ARATH1.606e-4757.58Delta-1-pyrroline-5-carboxylate synthetase A OS=Ar... [more]
P5CS_ORYSJ7.972e-4758.79Delta-1-pyrroline-5-carboxylate synthetase OS=Oryz... [more]
P5CS_VIGAC5.167e-4658.79Delta-1-pyrroline-5-carboxylate synthetase OS=Vign... [more]
P5CS_SOLLC4.375e-4558.18Delta-1-pyrroline-5-carboxylate synthetase OS=Sola... [more]
P5CS2_ARATH9.745e-4555.15Delta-1-pyrroline-5-carboxylate synthetase B OS=Ar... [more]
ALH13_CAEEL2.588e-1336.79Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
P5CS_PONAB2.423e-1135.54Delta-1-pyrroline-5-carboxylate synthetase OS=Pong... [more]
P5CS_MOUSE2.423e-1135.33Delta-1-pyrroline-5-carboxylate synthetase OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-E02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753836 ID=EY753836; Name=EY753836; organism=Citrus sinensis; type=EST; length=869bp
ATTCCAAGCCTGACCCACGCGTCCGCTAGGAAAGTTCCATACGAGGATTC
TTCTGGTATATCTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTTGG
AACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCTAT
AGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATAAG
AGCAAAACACCAAGCAGAGGTAACATTTGGAGACAAGTCAAGGGTTGGAA
GAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCGCC
GGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCATAAA
GGTACTTGAAGGAAAGCGTGTTGGGACTCTCTTTCATAGAGATGCACATT
TGTGGGTAAAACAAGTTGGGGCCCGTGAGATGGCAGTTCCAGCACCAGAA
AGTTCTACACGGTTTCAGGCTCTACTTTCTCAAGATGGGAGGAAAATTTT
GGTCGACGTTTTTGTTGCCTCGATGCTGTTAAAAGTTTATTAAGGTTGGG
ATGAAGCCCCTGCCCTTGCGGACAGGATTCTTCTTTTCTTATGTTCCTCG
TTCACTCTTGGCCCTCTTCCCTGTGACCCTCCCCTCCCCTCGTTCCCTTA
TCCCTTTCCTTCCGCTTTTGTCCTACTCCCTCGTTCCTCTTTTCATATTT
ATTCTTCTTTCTCTTGATTCTTTACTATTTATTTCTCTCTCTTTCGGCCT
CTCTCTTCCTTCTCCTCCGCTCTTACTCTCCGCCCCCTGCCCCTTCTCTT
GTTCTGTTTCCTGTCGTGGGTATCGAGTTTTCCTGGTACGGCCGCGCCCC
CCTCCTGTACCTACCGCCC
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