EY753813

Overview
NameEY753813
Unique NameEY753813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: AB8I_ARATH (UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana GN=ABCI8 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 5.280e-82
Identity = 164/261 (62.84%), Postives = 184/261 (70.50%), Query Frame = 1
Query:   85 MNSLLANGISSFSPQPTVDSPKLSKGFHPKLENPKFIVPKSSR----LFKVRADVGYGXXXXXXXXXXXXXXXXXXXXXXDDKIQEILRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFC-------PYPKLLGSIRFSXKYXGXSVPSE 834
            M SLLANGISSFSPQPT DS K  KGFHPK E+ KF  PKS      +FK+RADVG                         DK+Q+  +N DYDKK+GF  DIDS TIPKGL++ETI LIS LKEEP WMLE+R  A+ KFLK++EP WSDNRYP INFQDMCYYSAPKKKPTLNSLDE DP+L+ YFDKLGVPL EQ RLANVAVDAV+DSVSIATTHRKTLE++GVIFC        YP L+       KY G  VPS+
Sbjct:    1 MASLLANGISSFSPQPTSDSSKSPKGFHPKPESLKFPSPKSLNPTRPIFKLRADVGIDSRPIGASESSSSGTSTVSST---DKLQQYFQNLDYDKKYGFVEDIDSFTIPKGLSEETIRLISKLKEEPDWMLEFRFKAYAKFLKLEEPKWSDNRYPSINFQDMCYYSAPKKKPTLNSLDEVDPQLLEYFDKLGVPLTEQKRLANVAVDAVIDSVSIATTHRKTLEKSGVIFCSISEAIREYPDLI------KKYLGRVVPSD 252          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: AB9I_ARATH (Putative UPF0051 protein ABCI9 OS=Arabidopsis thaliana GN=ABCI9 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 8.764e-61
Identity = 135/265 (50.94%), Postives = 171/265 (64.53%), Query Frame = 1
Query:   85 MNSLLANGISSFSPQPTVDSPKLSKGFHPKLENPKFIVPKS---SRLFKVRADVGYGXXXXXXXXXXXXXXXXXXXXXXDDKIQEILRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEA----DPELIRYFDKLGVPLNEQNRLA-NVAVDAVLDSVSIATTHRKTLEEAGVIFC-------PYPKLLGSIRFSXKYXGXSVPSE 834
            M SL A G S FSPQPT D  KL K FHPK  + KF+  K+   +R FKVRA+ G                         DK+Q+  +N+DYDKK+GF  +IDS TIPKGL++ETI LIS LK+EPAW+LEYRL A+ KFLK++EP WSDNRYP ++ QDMC+YSAPKKKPTLNS D A    DP+L+  FD+L VPL ++ + +  VAVDAV +S SIA T+++ LE++GVIFC        YP L+       KY G  VPS+
Sbjct:    1 MASLFAIGFSKFSPQPTSDYSKLLKVFHPKPYSLKFLFLKTLNPTRFFKVRANDG---------------------TEPSDKLQQYFQNQDYDKKYGFLENIDSFTIPKGLSEETIRLISKLKKEPAWILEYRLKAYAKFLKLEEPKWSDNRYPLLDLQDMCFYSAPKKKPTLNSSDIADEADDPKLLEEFDRLDVPLTKKKKCSPKVAVDAVYNSESIAITNKEPLEKSGVIFCSISEAIRKYPDLI------KKYLGRVVPSD 238          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: YCF24_CYAPA (UPF0051 protein ycf24 OS=Cyanophora paradoxa GN=ycf24 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.718e-40
Identity = 92/167 (55.09%), Postives = 113/167 (67.66%), Query Frame = 1
Query:  328 EILRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMK-EPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFCP-------YP----KLLGSI 792
            E L N+ Y  K+G     +  TI KGLT+ETI LIS  K EP +MLE+RL A+ K+L+M  EP W+   YP IN+QDM YYSAPK+K  L SLDE DP L+  F+KLG+PL EQ RLANVAVDA+ DSVS+ATT ++ L + GVIFCP       YP    K LGS+
Sbjct:   13 ENLVNQPY--KYGLPLIFEIETISKGLTEETIRLISEKKNEPQFMLEFRLQAYRKWLEMSNEPEWAHLNYPKINYQDMVYYSAPKQKKKLQSLDEVDPTLLETFEKLGIPLTEQKRLANVAVDAIFDSVSVATTFKEELAKEGVIFCPISEAVQKYPDLIKKYLGSV 177          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: YCF24_PORPU (UPF0051 protein ycf24 OS=Porphyra purpurea GN=ycf24 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.828e-40
Identity = 84/165 (50.91%), Postives = 110/165 (66.67%), Query Frame = 1
Query:  358 KFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFCP-------YPKLLGSIRFSXKYXGXSVPS 831
            K+GF   ++S   P+G+++E + LIS  K EP ++L +RL A+EK+ KMK P W+  ++P I+F  + YY+ PK K  LNSLDE DPE++  F+KLG+ LNEQ RL+NVAVDAV DSVSIATT +K L EAGVIFC        YP L+       KY G  VPS
Sbjct:   23 KYGFTTSVESEQFPRGISREVVKLISKKKNEPEYLLNFRLKAYEKWTKMKNPKWAHLKHPNIDFNSIIYYAVPKLKKELNSLDEVDPEILDTFNKLGISLNEQKRLSNVAVDAVFDSVSIATTFKKELAEAGVIFCSISEAIRNYPDLI------QKYLGTVVPS 181          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: Y074_SYNY3 (UPF0051 protein slr0074 OS=Synechocystis sp. (strain PCC 6803) GN=slr0074 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.112e-38
Identity = 84/168 (50.00%), Postives = 114/168 (67.86%), Query Frame = 1
Query:  334 LRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKK-KPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFCPYPKLLGS-IRFSXKYXGXSVPS 831
            L N+ Y  K+GF  +I++  IP+GL+++ + LIS+ K EP +ML++RL A+  +L M EP W    YPPI++QD+ YYSAPK+ K  L SLDE DP L+  F+KLG+PL+EQ RL+NVAVDA+ DSVSI TT ++ L E GVIFC   + L        KY G  VP+
Sbjct:    9 LVNQPY--KYGFVTNIEADAIPRGLSEDVVRLISAKKNEPEFMLDFRLRAYRHWLTMAEPTWPAVHYPPIDYQDIIYYSAPKQSKKKLESLDEVDPALLETFEKLGIPLSEQKRLSNVAVDAIFDSVSIGTTFKEKLAEDGVIFCSISEALQEHPDLVQKYLGSVVPT 174          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: YCF24_PORYE (UPF0051 protein ycf24 OS=Porphyra yezoensis GN=ycf24 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.982e-38
Identity = 78/165 (47.27%), Postives = 111/165 (67.27%), Query Frame = 1
Query:  358 KFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFC-------PYPKLLGSIRFSXKYXGXSVPS 831
            K+GF   ++S   P+G++++ + LIS  K+EP ++L +RL A++K+ KM  P+W+  ++P I+F  + YY+ PK K  L SLDE DPE++  F+KLG+ LNEQ R++NVAVDAV DSVSIATT +K L EAGVIFC        YP+L+       KY G  VP+
Sbjct:   23 KYGFKTSVESEQFPRGISEDIVRLISKKKDEPEYLLNFRLKAYKKWKKMSSPSWAHIKHPNIDFNTIIYYAVPKLKKELKSLDEVDPEILDTFNKLGISLNEQKRISNVAVDAVFDSVSIATTFKKELSEAGVIFCSISEAIRDYPELI------KKYLGTVVPA 181          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: YCF24_ODOSI (UPF0051 protein ycf24 OS=Odontella sinensis GN=ycf24 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.362e-37
Identity = 87/172 (50.58%), Postives = 115/172 (66.86%), Query Frame = 1
Query:  334 LRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFC-------PYPKLLGSIRFSXKYXGXSVP 828
            L N+ Y  K+GF+  I+   I KGL ++ I LIS  K EP ++LE+RL AF+K+ +MK P+W+  ++  I++QD+ YYSAPK K  LNSLDE DPEL++ F+KLG+ L EQ RLANVA+DAV DSVSIATT ++ L E GVIF         YP+L+       KY G  VP
Sbjct:   16 LVNQPY--KYGFSTVIEKDIIEKGLNEDVICLISKKKNEPKFLLEFRLKAFKKWKEMKCPDWAQIKFSEIDYQDIIYYSAPKVKKKLNSLDEVDPELLKTFEKLGISLTEQKRLANVAIDAVFDSVSIATTFKEELAECGVIFSSISEAIQEYPELI------EKYLGSVVP 179          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: YCF24_GUITH (UPF0051 protein ycf24 OS=Guillardia theta GN=ycf24 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.839e-35
Identity = 74/158 (46.84%), Postives = 104/158 (65.82%), Query Frame = 1
Query:  358 KFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFCPYPKLLGSI-RFSXKYXGXSVP 828
            K+GF+ DI++   PKGL ++ I  IS LK EP++ML++RL ++  + KM  P W+   Y  IN+QD+ YYSAPK    L+SL++ D +++  FDKLG+PLNEQ +LANVAVDA+ DSVS+ TT ++ L   GV+FCP  +          KY G  VP
Sbjct:   19 KYGFHTDIENEEFPKGLDEDIIKEISKLKCEPSYMLDFRLKSYILWKKMSLPEWACLTYLNINYQDIVYYSAPKNSTKLDSLEDVDKKILETFDKLGIPLNEQKKLANVAVDAIFDSVSVGTTFKQELSNVGVLFCPLSEATNKYSTLVEKYLGSVVP 176          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: YCF24_CYACA (UPF0051 protein ycf24 OS=Cyanidium caldarium GN=ycf24 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.361e-28
Identity = 70/177 (39.55%), Postives = 104/177 (58.76%), Query Frame = 1
Query:  322 IQEILRNRDYDKKFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPKKKPTLNSLDEADPELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFC-------PYPKLLGSIRFSXKYXGXSVPS 831
            IQ IL N+ Y  K+GF+ +I S   PKG+ +E I L+S  K+EP ++L++RL A++ + KM+ P+W    +  INF D+  Y++PK +   N       E++  F+KLGVP+   N+   +AVDAV DS+S  TT +K L+E G+IFC        YP L+       KY G  VP+
Sbjct:   10 IQNIL-NKPY--KYGFSTEIQSEEFPKGINEEIIRLMSHKKQEPDFILKFRLKAYQIWKKMQAPDWGHLHHNEINFNDVLCYASPKLEQGKNKAQTISEEILATFEKLGVPIKPNNKQPKIAVDAVFDSISFGTTLQKELKEQGIIFCSISEAIKAYPNLI------KKYLGSIVPA 177          
BLAST of EY753813 vs. ExPASy Swiss-Prot
Match: SUFB_SHIFL (FeS cluster assembly protein sufB OS=Shigella flexneri GN=sufB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.909e-23
Identity = 64/171 (37.43%), Postives = 95/171 (55.56%), Query Frame = 1
Query:  358 KFGFNWDIDSVTIPKGLTKETIHLISSLKEEPAWMLEYRLSAFEKFLKMKEPNWSDNRYPPINFQDMCYYSAPK---------KKPTLNSLDEAD----PELIRYFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEEAGVIFCPYPKLL-GSIRFSXKYXGXSVP 828
            K GF   + +  + KG+ +E +  IS+ + EP WMLE+RL+A+  +L+M+EP+W    Y  +N+QD  YYSAP           +P       A+     E+   F++LGVP+ E      VAVDA+ DSVS+ATT+R+ L E G+IFC + + +        KY G  VP
Sbjct:   22 KEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGK---EVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHTELVRKYLGTVVP 189          
The following BLAST results are available for this feature:
BLAST of EY753813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
AB8I_ARATH5.280e-8262.84UPF0051 protein ABCI8, chloroplastic OS=Arabidopsi... [more]
AB9I_ARATH8.764e-6150.94Putative UPF0051 protein ABCI9 OS=Arabidopsis thal... [more]
YCF24_CYAPA1.718e-4055.09UPF0051 protein ycf24 OS=Cyanophora paradoxa GN=yc... [more]
YCF24_PORPU3.828e-4050.91UPF0051 protein ycf24 OS=Porphyra purpurea GN=ycf2... [more]
Y074_SYNY36.112e-3850.00UPF0051 protein slr0074 OS=Synechocystis sp. (stra... [more]
YCF24_PORYE7.982e-3847.27UPF0051 protein ycf24 OS=Porphyra yezoensis GN=ycf... [more]
YCF24_ODOSI1.362e-3750.58UPF0051 protein ycf24 OS=Odontella sinensis GN=ycf... [more]
YCF24_GUITH2.839e-3546.84UPF0051 protein ycf24 OS=Guillardia theta GN=ycf24... [more]
YCF24_CYACA3.361e-2839.55UPF0051 protein ycf24 OS=Cyanidium caldarium GN=yc... [more]
SUFB_SHIFL1.909e-2337.43FeS cluster assembly protein sufB OS=Shigella flex... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-B10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753813 ID=EY753813; Name=EY753813; organism=Citrus sinensis; type=EST; length=968bp
GTNCCTGNTCCGGNATTCCCGGGCCGACCCCGCGTCCGAAACAAAAACAT
AGTGCTTTTTTTTTCCCCTCTCTCATCCACAACCATGAATTCTCTGCTAG
CTAACGGAATTTCAAGCTTCTCTCCGCAGCCCACCGTTGATTCACCAAAA
CTCTCGAAAGGGTTTCACCCAAAGCTCGAAAATCCCAAGTTCATAGTCCC
CAAAAGCTCAAGGCTCTTCAAGGTCCGTGCGGATGTCGGGTACGGGTCAA
GCACCATCAGCTCCGACCCTAGCTCTTCGCCAGGTAATTTGTCAACTTCT
ACCCAGAGCTCCGATGATAAAATTCAAGAAATTTTACGCAATCGTGATTA
CGATAAGAAATTCGGCTTTAATTGGGATATTGACTCGGTTACGATCCCAA
AAGGCCTCACGAAAGAAACGATTCATTTGATTTCTTCTTTAAAAGAAGAA
CCCGCCTGGATGCTTGAGTATAGATTGAGTGCCTTTGAGAAATTTCTTAA
AATGAAAGAACCCAATTGGTCTGATAATCGATACCCGCCAATTAATTTCC
AAGATATGTGTTATTACTCTGCACCCAAAAAGAAGCCAACTTTAAATAGC
CTTGATGAGGCCGATCCAGAGCTGATTAGGTATTTTGATAAACTGGGTGT
GCCTTTAAATGAACAGAATCGATTGGCTAATGTGGCAGTTGATGCTGTTC
TTGATAGTGTTTCTATTGCCACAACTCATAGGAAGACTCTTGAGGAGGCT
GGTGTGATTTTTTGTCCATATCCGAAGCTATTAGGGAGCATCCGATTTAG
TANGAAGTATTANGGNNAGAGTGTGCCCAGTGAGATATTACTATGCACAC
TGATGCTGNCGTGTTANTGGATGATCGTTTTGTCATCCCGAAGATACTAN
GTGCCAATGCGATTCACATATTTAGGATTACCCATGGAACGGGCATTTCA
GAGACTTGATAGTGCGAT
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