EY753800

Overview
NameEY753800
Unique NameEY753800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13127 contig Csv1_Contig13127:1..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753800 vs. ExPASy Swiss-Prot
Match: PPDE2_XENLA (PPPDE peptidase domain-containing protein 2 OS=Xenopus laevis GN=pppde2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.732e-35
Identity = 74/160 (46.25%), Postives = 104/160 (65.00%), Query Frame = 2
Query:  173 DMAEESHKVSLHVYDLSQGLARQLSMSFLGKAIEGIWHTGIVVYGNEYYFGG-GIQHDCVGATPYGKPLRVVELGETHVPKDVFEMYLEEISPR-YTAEKYSLLSHNCNNFSNEVAQFLVGKTIPEYILNLPNEVMSSPMGALVLPMIQNLEATMKAGAV 646
            + AE  H V L+VYD+S+GLAR+LS   LGK +EGIWHT I+V+  E+++G  GI     G T  G+P  V+ELG T V +++F  YL  +    ++ E Y L  HNCN FSNEVAQFL GK IP YI  LP+EV+S+P+G  + P++ +++     G +
Sbjct:    2 ETAEGPHLVRLYVYDMSRGLARRLSPVMLGKQLEGIWHTSIIVFDEEFFYGREGITSCLPGRTMLGEPDSVMELGITEVTEEIFLEYLSSLGESGFSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITELPSEVLSTPLGQALRPLLDSVQIQPAGGNI 161          
BLAST of EY753800 vs. ExPASy Swiss-Prot
Match: PPDE2_HUMAN (PPPDE peptidase domain-containing protein 2 OS=Homo sapiens GN=PPPDE2 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.178e-34
Identity = 73/153 (47.71%), Postives = 102/153 (66.67%), Query Frame = 2
Query:  191 HKVSLHVYDLSQGLARQLSMSFLGKAIEGIWHTGIVVYGNEYYFG-GGIQHDCVGATPYGKPLRVVELGETHVPKDVFEMYLEEISPR-YTAEKYSLLSHNCNNFSNEVAQFLVGKTIPEYILNLPNEVMSSPMGALVLPMIQNLEATMKAGA 643
            + V L+VYDLS+GLAR+LS   LGK +EGIWHT IVV+ +E++FG GGI     G T  G P  VV++G T V +++F  YL  +    +  E Y+L  HNCN FSNEVAQFL G+ IP YI +LP+EV+S+P G  + P++ +++     G+
Sbjct:    7 YPVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSGGISSCPPGGTLLGPPDSVVDVGSTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFGQALRPLLDSIQIQPPGGS 159          
BLAST of EY753800 vs. ExPASy Swiss-Prot
Match: PPDE2_RAT (PPPDE peptidase domain-containing protein 2 OS=Rattus norvegicus GN=Pppde2 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.412e-33
Identity = 72/152 (47.37%), Postives = 99/152 (65.13%), Query Frame = 2
Query:  191 HKVSLHVYDLSQGLARQLSMSFLGKAIEGIWHTGIVVYGNEYYFGG-GIQHDCVGATPYGKPLRVVELGETHVPKDVFEMYLEEISPR-YTAEKYSLLSHNCNNFSNEVAQFLVGKTIPEYILNLPNEVMSSPMGALVLPMIQNLEATMKAG 640
            + V L+VYDLS+GLAR+LS   LGK +EGIWHT IVV+ +E++FG  GI     G T  G P  VV++G T V +++F  YL  +    +  E Y+L  HNCN FSNEVAQFL G+ IP YI +LP+EV+S+P G  + P + +++     G
Sbjct:    7 YPVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSSGISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFGQALRPFLDSIQIQPPGG 158          
BLAST of EY753800 vs. ExPASy Swiss-Prot
Match: PPDE2_MOUSE (PPPDE peptidase domain-containing protein 2 OS=Mus musculus GN=Pppde2 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.412e-33
Identity = 72/152 (47.37%), Postives = 99/152 (65.13%), Query Frame = 2
Query:  191 HKVSLHVYDLSQGLARQLSMSFLGKAIEGIWHTGIVVYGNEYYFGG-GIQHDCVGATPYGKPLRVVELGETHVPKDVFEMYLEEISPR-YTAEKYSLLSHNCNNFSNEVAQFLVGKTIPEYILNLPNEVMSSPMGALVLPMIQNLEATMKAG 640
            + V L+VYDLS+GLAR+LS   LGK +EGIWHT IVV+ +E++FG  GI     G T  G P  VV++G T V +++F  YL  +    +  E Y+L  HNCN FSNEVAQFL G+ IP YI +LP+EV+S+P G  + P + +++     G
Sbjct:    7 YPVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSSGISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFGQALRPFLDSIQIQPPGG 158          
The following BLAST results are available for this feature:
BLAST of EY753800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PPDE2_XENLA5.732e-3546.25PPPDE peptidase domain-containing protein 2 OS=Xen... [more]
PPDE2_HUMAN2.178e-3447.71PPPDE peptidase domain-containing protein 2 OS=Hom... [more]
PPDE2_RAT1.412e-3347.37PPPDE peptidase domain-containing protein 2 OS=Rat... [more]
PPDE2_MOUSE1.412e-3347.37PPPDE peptidase domain-containing protein 2 OS=Mus... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-A08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753800 ID=EY753800; Name=EY753800; organism=Citrus sinensis; type=EST; length=905bp
GTTTCTCTTTTCCCTAAATTGACTGAGAAAAGAAACAAAAAGGAAAAATA
CAACTCTTCATCGTCTTCTTCTCAGGTTTCATTGTGATTTCAAAGGCCAT
CTTGCTCGGTTTCATTGGAAATTTTACAGCGCTTAGTATTTCACAGTGCA
AAACTTTTCGTATTAGACTGCAGATATGGCTGAGGAGAGTCACAAGGTTT
CCTTGCATGTTTATGATTTAAGCCAAGGACTAGCCCGACAACTTTCTATG
TCATTCTTGGGGAAGGCTATTGAGGGAATATGGCACACAGGAATTGTGGT
CTATGGTAACGAATATTATTTTGGGGGTGGTATACAACATGATTGTGTTG
GAGCAACACCATATGGAAAACCATTGAGGGTGGTAGAATTGGGTGAAACA
CATGTGCCAAAGGATGTGTTTGAAATGTATCTAGAAGAAATTAGTCCTCG
TTATACTGCAGAAAAATATAGTCTGCTATCTCACAATTGCAACAACTTTA
GCAATGAGGTTGCACAATTTTTGGTGGGAAAAACGATCCCTGAGTATATT
TTGAATCTCCCTAATGAAGTTATGAGCAGTCCAATGGGTGCGCTTGTATT
GCCCATGATACAGAACCTGGAAGCAACAATGAAAGCAGGTGCGGTACCTC
AAGCTCCTCAGTTCAGGCCTGCTCCACTGGCTCAGTCTTCAAGATCTCTG
AGTGGTGATACTGTGAACAAATCCTCTNAGCATAGTCCCAGGCCATCTGT
GCAGCAAAAGAACGTCAGAGAGCCTTTCAGTACGATGAAAACTGAAAGAG
CAGCCATTGGGTGTGAGGAGCCAAAGAAATGGNCCACACAGTGCCTNCTG
CAAAGGAGTACAAATNCAGGTGTTGATGGGGTTACGGAGACCCCTTGGGA
TGCTC
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