EY753763

Overview
NameEY753763
Unique NameEY753763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753763_ssr433 microsatellite EY753763_ssr433:433..446. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13145 contig Csv1_Contig13145:35..639. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753763 vs. ExPASy Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 3
Query:   66 KAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMML 251
            +AF+VFDVNGDG+I++EEL+ VL RLG  +E  + DC  MI V+D N DG +DFEEFKNM+L
Sbjct:   92 RAFNVFDVNGDGYISAEELRDVLERLGFEEEAKAWDCGRMIRVHDKNLDGFVDFEEFKNMIL 153          
BLAST of EY753763 vs. ExPASy Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13
Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 3
Query:   66 KAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 248
            +AF+VFD NGDGFIT +EL+SVL+ LGL   +++ DCR MI + D + DG +DF+EFK MM
Sbjct:  102 EAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMM 162          
BLAST of EY753763 vs. ExPASy Swiss-Prot
Match: CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.913e-13
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 3
Query:   66 KAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 248
            +AF VFD NGDGFIT EEL+SVLA +GL   ++ +DC+ MI   D + DG+++F+EFK MM
Sbjct:   81 EAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDGDGMVNFKEFKQMM 141          
BLAST of EY753763 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.778e-12
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 3
Query:   66 KAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 248
            +AF+VFD N DGFIT EEL+SVLA LGL   ++ +DC+ MI   D + DG+++F+EFK MM
Sbjct:   81 EAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMM 141          
BLAST of EY753763 vs. ExPASy Swiss-Prot
Match: CML32_ORYSJ (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica GN=CML32 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.867e-11
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   66 KAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMMLRSTV 263
            +AF VFDV+GDGFI++ ELQ VL +LGL +  S    R MI   D NSDG +DF EFK+MM   TV
Sbjct:  128 EAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMMQGITV 193          
BLAST of EY753763 vs. ExPASy Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11
Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 3
Query:   66 KAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 248
            +AF+VFD NGDGFIT +EL++VL+ LGL   K+  DC+ MI   D + DG ++++EF+ MM
Sbjct:   82 EAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142          
The following BLAST results are available for this feature:
BLAST of EY753763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CML44_ARATH3.273e-1561.29Probable calcium-binding protein CML44 OS=Arabidop... [more]
CML28_ORYSJ5.226e-1357.38Probable calcium-binding protein CML28 OS=Oryza sa... [more]
CML2_ARATH8.913e-1355.74Calmodulin-like protein 2 OS=Arabidopsis thaliana ... [more]
CML3_ARATH5.778e-1255.74Calmodulin-like protein 3 OS=Arabidopsis thaliana ... [more]
CML32_ORYSJ2.867e-1156.06Probable calcium-binding protein CML32 OS=Oryza sa... [more]
CML7_ARATH6.388e-1150.82Calmodulin-like protein 7 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-F05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753763 ID=EY753763; Name=EY753763; organism=Citrus sinensis; type=EST; length=605bp
CTTCCCATTATGCTGATGAAGCAGCTGATGATGACAGCGGCGACGAAGAG
ATCAGTGATCTTTACAAAGCGTTCAGTGTGTTCGATGTGAATGGTGATGG
ATTCATTACAAGCGAAGAGCTTCAGAGTGTGTTGGCGAGACTCGGATTGT
GGGATGAGAAAAGCAGCCAAGATTGCAGAAGCATGATTTACGTGTATGAT
ACCAATTCTGATGGGGTTCTTGATTTTGAAGAATTCAAGAACATGATGCT
TCGTAGTACTGTTTCTTAATTCGTTATTAATTTCGTGCCTGTTAATCTTG
ACCTTGTTTTTTTTTTTTTTTATAATCTGTGAAATTATGTTGATTATATG
ATGGTCGTAATTTGTTAGACCCGAGATCAACATAATTAGCCGAGCTTATT
AGATTATTTGTTGTTTTGTTTAATCTTATATATGTGTGTGTGTGTGTACG
TATGATCCTTCAAATAATGCGTGTACATTGTGTAATTCTGTGTTAAAAAT
GTTTAAAATAGTATTATCTAGTTGGAGTTTTATAGTATCTCTCCGAAAAA
TCCATGTCCGTTTTAATTAAATAAAGCTTTCAATTATTATGTTTAANTNN
NANAN
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