EY753752

Overview
NameEY753752
Unique NameEY753752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7329 contig Csv1_Contig7329:36..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY753752 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.105e-40
Identity = 95/169 (56.21%), Postives = 117/169 (69.23%), Query Frame = 1 
Query:   13 VSMAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAIENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 510
            +S+AA++  AV+ PRVP+ +T       C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:    3 ISVAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY753752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH2.105e-4056.21Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-E04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753752 ID=EY753752; Name=EY753752; organism=Citrus sinensis; type=EST; length=783bp
CACAAATCAAATGTATCAATGGCAGCGACGGCGTACGCGGCGGTGTTAAC
TCCACGTGTCCCCTCAACCACCACCGTCAAAGTCAAATCTTCTCACTGCT
TTGCTCTTCCCTGCCTCCCTCCTCGTTCGTCAACGCCACCATTCTCTTCT
TCCATTAAACAAGTTTCAGAGTCGAGAAGGTTTCCTTTGCTTCAGGTTAG
AGCCTCTTCCTCAGAAGAGACATCCACAGTTGATGCAGATGAACTTTTTT
CAGACTTGAAGGAAAAGTGGGATGCCATTGAAAACAAGTCCACGGTACTT
CTCTATGGAGGTGGGGCAATAGTGGCTGTTTGGTTATCCTCAACTATTGT
TGGTGCCATCAATTCAGTGCCTTTGCTTCCCAAACTCTTGGAGTTGATTG
GACTTGGTTATACTGGATGGTTTGTCTACAGATACCTTCTCTTCAAGTCA
AGCAGAAAAGAACTAGCCACGGATATTGAAGCACTGAAGAAGAAGATTGC
TGGAACTGAATAGATTGTACATTCTGGAGGCAATTCATGTTTGTCCCTGA
TAGTCATTTATTTTGGTCCTCTATCATTGCATATGAGGCACTTGTATCCT
GTAGAGTAGGCTGCGTACGGATTCGTTTTATCCCTGTATTTTCCAGTATA
TCCCTGGAATAAGAGATTTGACAAAGNTATGTGTATGTCCAGGCATGATT
GCTTCTGTGGTTAAATCCAGAAGCAGATTCACTTTTTCCAGCAAATACAT
GCTTCATAAAATCTGTATCAAAAAAAAAAAAAA
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