EY753750

Overview
NameEY753750
Unique NameEY753750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753750_ssr73 microsatellite EY753750_ssr73:73..84. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753750 vs. ExPASy Swiss-Prot
Match: Y2168_ARATH (Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.747e-59
Identity = 108/167 (64.67%), Postives = 135/167 (80.84%), Query Frame = 3
Query:  156 RFITHQSFFSAVRSGDLETIKNIIDNLTKDEAPDGSS---LVSELMAMQNDTGETALYISAANNFQDIFSCLLKFCDVEIVKIRSRSDMNTFHVAAKKGHLGIAKELVSIWPELCKSCDSSNTSPLYSAAVQDLWDVVNTILDADVSCTRIVRKNGKTALHTAARDG 647
            +F+THQ+FFS+VRSGDL  ++ ++DNLT DE  D SS    V+ELM++QND GETA+YISAA N +DIF  L++F  +E VKIRS+SDMN FHVAAK+GHLGI KEL+ +WPELC+ CD+SNTSPLY+AAVQD  ++VN +LD D SC  IVRKNGKT+LHTA R G
Sbjct:    7 KFLTHQAFFSSVRSGDLSQLQQLVDNLTGDELIDESSPCSAVAELMSVQNDAGETAVYISAAENLEDIFRYLIRFSSLETVKIRSKSDMNAFHVAAKRGHLGIVKELLRLWPELCRICDASNTSPLYAAAVQDHLEIVNAMLDVDPSCAMIVRKNGKTSLHTAGRYG 173          

HSP 2 Score: 28.1054 bits (61), Expect = 1.747e-59
Identity = 24/68 (35.29%), Postives = 33/68 (48.53%), Query Frame = 2
Query:  671 LLARDPQICHIQDKKGQTASIWLERVIVLPWDKDLLSAGLLILMSR-TGGPFSGAFAYRKCRLQKTPL 871
            L+ +D  I  ++DKKGQTA     +   L   +++L A   IL  R   G  +   A RK R Q T L
Sbjct:  181 LIEKDAAIVGVKDKKGQTALHMAVKGRSLEVVEEILQADYTILNERDRKGNTALHIATRKARPQITSL 248          
BLAST of EY753750 vs. ExPASy Swiss-Prot
Match: Y5262_ARATH (Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 60/155 (38.71%), Postives = 90/155 (58.06%), Query Frame = 3
Query:  183 SAVRSGDLETIKNIIDNLTKDEAPDGSSLVSELMAMQNDTGETALYISAANNFQDIFSCLLKFCDVEIVKIRSRSDMNTFHVAAKKGHLGIAKELVSIWPELCKSCDSSNTSPLYSAAVQDLWDVVNTILDADVSCTRIVRKNGKTALHTAARDG 647
            +AVR G  + +  +I         DG  L  EL+A QN +GETALY++A   + D+   L+K  D  +   ++++  + FH+AAK G+L +   L+   PEL  + DSS T+ L++AA Q   ++V  +LD  V    I R NGKTALH+AAR+G
Sbjct:   23 TAVREGKTDLLLEMIGE------HDGVEL-KELLAEQNQSGETALYVAAEYGYTDMVKILMKHSDSVLAGTKAKNGFDAFHIAAKNGNLQVLDVLIEANPELSFTFDSSKTTALHTAASQGHGEIVCFLLDKGVDLAAIARSNGKTALHSAARNG 170          
BLAST of EY753750 vs. ExPASy Swiss-Prot
Match: Y3236_ARATH (Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.122e-16
Identity = 52/163 (31.90%), Postives = 83/163 (50.92%), Query Frame = 3
Query:  186 AVRSGDLETIKNIIDNLTKD-----EAPDGSSLVSELMAM----QNDTGETALYISAANNFQDIFSCLLKFCDVEIVKIRSRSDMNTFHVAAKKGHLGIAKELVSIWPELCKSCDSSNTSPLYSAAVQDLWDVVNTILDADVSCTRIVRKNGKTALHTAARDG 647
            A + GDL  ++ I+ ++           +  + V+E+ A      N+ GETAL+ +A     D+   LLK+   E +  ++RS  +  H+AA +GH  I + L+     L ++   SN +PL SAA++   +VVN +L    +   I R N K ALH AAR G
Sbjct:   81 AAQRGDLAAVQQILKDINSQMEGILSGEEFDAEVAEIRASIVNEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAARQG 243          

HSP 2 Score: 29.261 bits (64), Expect = 1.122e-16
Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 2
Query:  638 QGWVSLL*FQLLLARDPQICHIQDKKGQTA 727
            QG V ++  + LL++DPQ+    DKKGQTA
Sbjct:  242 QGHVEVI--KALLSKDPQLARRIDKKGQTA 269          
The following BLAST results are available for this feature:
BLAST of EY753750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y2168_ARATH1.747e-5964.67Ankyrin repeat-containing protein At2g01680 OS=Ara... [more]
Y5262_ARATH2.069e-2138.71Ankyrin repeat-containing protein At5g02620 OS=Ara... [more]
Y3236_ARATH1.122e-1631.90Ankyrin repeat-containing protein At3g12360 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-E02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753750 ID=EY753750; Name=EY753750; organism=Citrus sinensis; type=EST; length=894bp
ATCAAATCCTTTTCGCATCTTATTAAGTCTTCTCTTCATTGACAAAGAAG
AAAGAAAACACAAAGTGTACTAAAGAAGAAGAAGATCATTTTTATTATGC
TTGTAAATTGGATTTCAGTTCTTCAAGTCTTCTGATGGATTCATTAAAGT
CATTCAGGTTCATTACCCACCAATCTTTTTTCTCTGCCGTTCGATCTGGG
GACCTGGAAACCATCAAGAATATTATTGATAATTTGACAAAGGATGAAGC
TCCTGATGGTTCTTCTTTGGTATCTGAGCTAATGGCTATGCAGAATGATA
CAGGGGAGACTGCCCTGTACATCTCCGCAGCTAATAATTTTCAGGATATT
TTCAGTTGCTTGCTTAAGTTTTGTGATGTTGAGATTGTCAAAATCAGGTC
CCGGTCTGATATGAACACGTTTCATGTTGCCGCTAAGAAAGGCCACTTGG
GGATCGCAAAGGAGCTTGTGAGCATTTGGCCTGAGCTATGTAAGTCCTGT
GACTCCTCAAATACTAGCCCACTTTATTCGGCAGCTGTGCAAGATCTTTG
GGATGTGGTGAATACCATCTTGGATGCTGATGTCAGCTGCACGAGAATTG
TTAGAAAAAATGGAAAAACAGCGCTGCATACTGCTGCCAGGGATGGGTCT
CATTATTATAGTTTCAGCTTTTATTAGCCCGGGATCCCCAAATTTGTCAC
ATTCAAGATAAGAAAGGTCAAACTGCCTCCATTTGGCTGGAAAGGGTCAT
TGTCCTTCCATGGGACAAGGATTTATTATCCGCTGGACTTTTAATCCTAA
TGAGCCGGACAGGAGGGCCATTCAGCGGGGCCTTTGCTTACAGGAAATGC
CGTCTCCAAAAGACCCCTTTGCGAAATTTACATCCTAGGAGACC
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