EY753733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753733 vs. ExPASy Swiss-Prot
Match: NCBP1_ARATH (Nuclear cap-binding protein subunit 1 OS=Arabidopsis thaliana GN=ABH1 PE=1 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 2.304e-69 Identity = 117/162 (72.22%), Postives = 139/162 (85.80%), Query Frame = 3 Query: 210 MSSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCL 695 MS+WK LLL+IG+ PEYG S D KDHIETCFGVIRRE+E S D V +++ CAEQ+PHKIPLYGTL+GLLNLENEDFV+K+VE+ FQ ALDSGNC+ IRIL+RF+T ++CSK++QP SL+VVFETLLSSAATTVDE+KGNPSWQ +ADFYV CILS L Sbjct: 1 MSNWKTLLLRIGEKGPEYGTSSDYKDHIETCFGVIRREIERSGDQVLPFLLQCAEQLPHKIPLYGTLIGLLNLENEDFVQKLVESVHANFQVALDSGNCNSIRILLRFMTSLLCSKVIQPASLIVVFETLLSSAATTVDEEKGNPSWQPQADFYVICILSSL 162 HSP 2 Score: 33.113 bits (74), Expect = 2.304e-69 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 695 PWGGAELIEQVPEK*E-IMAGLGAY 766 PWGG+EL EQVP++ E ++ G+ AY Sbjct: 163 PWGGSELAEQVPDEIERVLVGIQAY 187
BLAST of EY753733 vs. ExPASy Swiss-Prot
Match: NCBP1_ORYSJ (Nuclear cap-binding protein subunit 1 OS=Oryza sativa subsp. japonica GN=ABH1 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.049e-58 Identity = 98/161 (60.87%), Postives = 125/161 (77.64%), Query Frame = 3 Query: 213 SSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCL 695 + W+ LLL+IGD CPEYG S D K+HIETC+GV+ RE EHS D + +++ CA+Q+PHKIP +G L+GL+NLENEDF K +V+TT QDAL + N DRIRIL+RFL +MCSK++ P S++ FE LLSSAAT +DE+ GNPSWQ RADFYV CIL+ L Sbjct: 3 AGWRTLLLRIGDRCPEYGGSADHKEHIETCYGVLCREYEHSKDAMFEFLLQCADQLPHKIPFFGVLIGLINLENEDFSKGIVDTTHANLQDALHNENRDRIRILLRFLCGLMCSKVVLPNSIIETFEALLSSAATILDEETGNPSWQPRADFYVYCILASL 163 HSP 2 Score: 32.3426 bits (72), Expect = 2.049e-58 Identity = 13/25 (52.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 695 PWGGAELIEQVPEK*E-IMAGLGAY 766 PWGG+EL EQVP++ E ++ G+ +Y Sbjct: 164 PWGGSELFEQVPDEFERVLVGIQSY 188
BLAST of EY753733 vs. ExPASy Swiss-Prot
Match: NCBP1_RAT (Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus GN=Ncbp1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.379e-11 Identity = 46/158 (29.11%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 222 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCL 695 ++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V +FE +S T +ED Q R D+YV LS L Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSL 177
BLAST of EY753733 vs. ExPASy Swiss-Prot
Match: NCBP1_MOUSE (Nuclear cap-binding protein subunit 1 OS=Mus musculus GN=Ncbp1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.379e-11 Identity = 46/158 (29.11%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 222 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCL 695 ++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V +FE +S T +ED Q R D+YV LS L Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSL 177
BLAST of EY753733 vs. ExPASy Swiss-Prot
Match: NCBP1_HUMAN (Nuclear cap-binding protein subunit 1 OS=Homo sapiens GN=NCBP1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.379e-11 Identity = 46/158 (29.11%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 222 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCL 695 ++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V +FE +S T +ED Q R D+YV LS L Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSL 177
BLAST of EY753733 vs. ExPASy Swiss-Prot
Match: NCBP1_ANOGA (Nuclear cap-binding protein subunit 1 OS=Anopheles gambiae GN=Cbp80 PE=3 SV=4) HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11 Identity = 42/158 (26.58%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 222 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSSDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCL 695 + L+L++G+N ++ L+ ++E V+ +L + + + +C ++P K +Y T+VGL+N +N +F + VE + F+D+L D R +RFL ++ ++ SL+ + ++++ +A +ED Q R D+YV +LS L Sbjct: 35 ETLILRVGEN-----STSSLESNLEGLVSVLESDLGNFRSKILRILSDCPIKMPEKCTIYSTMVGLMNAKNYNFGGEFVEYMVKTFKDSLKQCQWDAARYALRFLADLVNCHVISTNSLLQLLDSMVDAA----NEDNVP---QVRRDWYVFAVLSTL 180 The following BLAST results are available for this feature:
BLAST of EY753733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753733 ID=EY753733; Name=EY753733; organism=Citrus sinensis; type=EST; length=855bpback to top |