EY753634

Overview
NameEY753634
Unique NameEY753634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753634 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.118e-15
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 2
Query:    2 QVRFGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 136
            +VR GR GIEE+YSLGPLNEYER GLEKAKKELAGSI+KGVSF+R
Sbjct:  311 KVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355          
BLAST of EY753634 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.174e-15
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 2
Query:    2 QVRFGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 136
            +VR GR GI+E+YSLGPLNEYER GLEKAKKELAGSI+KGVSF+R
Sbjct:  311 KVRLGRNGIDEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355          
BLAST of EY753634 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.553e-14
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 2
Query:    2 QVRFGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 139
            +VR GR G EE+Y LGPLNEYER GLEKAK ELAGSIQKGV F+RK
Sbjct:  309 KVRLGRTGAEEVYQLGPLNEYERIGLEKAKDELAGSIQKGVEFIRK 354          
BLAST of EY753634 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.947e-14
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    2 QVRFGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 139
            +VR GR G EE++ LGPLNEYER GLEKAK+ELAGSIQKGV F+RK
Sbjct:  313 KVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358          
BLAST of EY753634 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 5.947e-14
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    2 QVRFGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 139
            +VR GR G EE++ LGPLNEYER GLEKAK+ELAGSIQKGV F+RK
Sbjct:  313 KVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358          
BLAST of EY753634 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.014e-13
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 2
Query:    2 QVRFGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 139
            +VR GR GIEEI SLGPLNE+ERAGLEKAKKELA SIQKGV+F+ K
Sbjct:  311 KVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK 356          
BLAST of EY753634 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.465e-12
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 2
Query:    2 QVRFGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 139
            +VR GR G+EEI  LGPLN+YER  LEKAKKELA SI+KG+SF+RK
Sbjct:  308 KVRLGRVGVEEILPLGPLNDYERESLEKAKKELAASIEKGISFIRK 353          
BLAST of EY753634 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 2
Query:    2 QVRFGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 139
            +VR GR GI+E+Y LGPLNEYER GLEKAKKEL+ SI KGV+F +K
Sbjct:  309 KVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354          
The following BLAST results are available for this feature:
BLAST of EY753634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MDHG_CITLA4.118e-1584.44Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_CUCSA9.174e-1582.22Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG1_ARATH4.553e-1478.26Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG2_BRANA5.947e-1476.09Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA5.947e-1476.09Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHG_ORYSJ1.014e-1380.43Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG_SOYBN1.465e-1271.74Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG2_ARATH1.913e-1271.74Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-B02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753634 ID=EY753634; Name=EY753634; organism=Citrus sinensis; type=EST; length=474bp
CCAAGTACGTTTTGGCCGTGCTGGAATTGAGGAAATCTACTCACTTGGCC
CATTGAATGAGTATGAGAGGGCTGGTTTGGAGAAGGCAAAGAAAGAGTTA
GCGGGAAGCATTCAGAAGGGAGTCAGTTTTGTCAGGAAATGAGTAACCAA
TCACATGGTGACTAATGATAATGGTTGTGCTTTTGTTGTTTGCCTCAAAT
ATCTCAAGATTACTTTCCCCAGAATAAGAGGTAGGGTTTTCGTTTTTCCA
TAATCAGATGGAATTAAGTTAGGTACAAAGAAGAAGCAAAAGATTCATCT
TTGTGGGGTTGGTTTGGTTCTTTTGATATTCTTGTAATGAATGGATAAAG
AATATGTAGATGACGAACTGCCGCCTGTCTTATCATTTTAATCAATTCAA
AATCAGAGTTCATACTTCTGCCNNNNAAAAAAAAAAAAAAAAAAANAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
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