EY753628

Overview
NameEY753628
Unique NameEY753628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753628 vs. ExPASy Swiss-Prot
Match: TL225_ARATH (Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.695e-71
Identity = 136/157 (86.62%), Postives = 144/157 (91.72%), Query Frame = 1 
Query:  292 LADLNKYEA*TRGEFGIGSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLRGAIIEGADFSDAVIDLAQKQALCKYANGTNPITGVSTXKSLXCGNSRR 762
            +A+LN++EA TRGEFGIGSAAQ+GSADL K VH  ENFRRANFTSADMRESDFSGS FNGAYLEKAVAYKANF+GADLSDTLMDRMVLNEANLTNAVLVR+VLTRSDL GA IEGADFSDAVIDL QKQALCKYA GTNP+TGV T KSL CGNSRR
Sbjct:   89 MAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRR 245
The following BLAST results are available for this feature:
BLAST of EY753628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TL225_ARATH4.695e-7186.62Thylakoid lumenal protein At1g12250, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-A08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753628 ID=EY753628; Name=EY753628; organism=Citrus sinensis; type=EST; length=873bp
CTGCTTATCACACTGTCATGGCGCTTTCTTCAATTTCCCCACTATCCATT
AAATCTCTGAACTTCTGCTCTTCATCTTCAAAGGGTCCGTATCAGCTGCA
TGCCCTGTCAAAGCCACTTTGGGTAGCCTGTCAAATAAGCTCCAAGACTG
AGAGTGAAGGCCAATTTCCTGGAAGATTGTTCCAACAATCAGTGTGCAGG
CCCATATGCAAAACTAAAGAACTGGCGAGTTTTTGTGTCGACTGCATTAG
CAGCTGCGGTGGTTGCATCGTGCAGCTCTAACATCTCTGCTCTTGCTGAT
CTTAATAAGTACGAGGCATAAACTCGCGGGGAATTTGGCATAGGGTCAGC
TGCCCAATTCGGTTCTGCAGATCTCAGGAAAGCAGTACATGTGAAAGAAA
ATTTCAGAAGAGCAAATTTCACATCAGCCGATATGAGAGAATCTGATTTC
AGTGGTTCAAAATTCAATGGTGCATATCTTGAGAAAGCTGTTGCATATAA
GGCCAATTTTACAGGTGCGGATTTAAGTGACACATTAATGGATCGCATGG
TACTTAACGAAGCTAATCTCACGAATGCTGTACTTGTTAGAACAGTACTA
ACTCGAAGTGATCTTCGAGGTGCCATTATTGAAGGTGCTGATTTTAGTGA
TGCTGTTATAGATCTTGCACAGAAGCAGGCTCTTTGCAAGTATGCAAATG
GAACAAATCCCATAACAGGAGTGAGCACCANAAAAAGCCTANGNTGTGGA
AATAGCCGAAGAATGCGTATGGATCACCTCATCTNCTCTNGTAGTGCTCA
CCTCAAAAGTGCTNGATCGAGATGGTTATGTGACTCGGCACTGAACTTAG
GGAGCTAATATTTTCCCTGACTG
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