EY753620

Overview
NameEY753620
Unique NameEY753620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig328 contig Csv1_Contig328:723..1313. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753620 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.783e-32
Identity = 51/78 (65.38%), Postives = 66/78 (84.62%), Query Frame = 2
Query:   14 P*EHTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 247
            P  +TCCC+FEYG  CFAWGCCPLEAATCCDD+YSCCPH+YP+C++  GTCL+SK++P  V+AL+R PA P+W+ G +
Sbjct:  382 PESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459          
BLAST of EY753620 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 6.200e-32
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 2
Query:   14 P*EHTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 226
            P   TCCC++EYG  C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP
Sbjct:  374 PDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444          
BLAST of EY753620 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.804e-31
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 2
Query:   26 TCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 250
            TCCC+ ++  SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R  A+P  A GN G
Sbjct:  267 TCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341          
BLAST of EY753620 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.252e-24
Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 2
Query:   26 TCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 223
            TCCC F + N C  WGCCP+E ATCC DH SCCP DYP+CN RAGTC  SK++PL V+AL+RT AK
Sbjct:  397 TCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462          
BLAST of EY753620 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.751e-18
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 2
Query:   26 TCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 226
            TCCC +   N C  WGCCP+E ATCC DH +CCP +YP+CN +A TC  SK++P  +R      R  P +P
Sbjct:  406 TCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476          
The following BLAST results are available for this feature:
BLAST of EY753620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RD21A_ARATH2.783e-3265.38Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ6.200e-3274.65Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSPL_SOLLC1.804e-3170.67Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ1.252e-2466.67Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ1.751e-1849.30Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-H10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753620 ID=EY753620; Name=EY753620; organism=Citrus sinensis; type=EST; length=590bp
ATTATTATTCTTGCCCTGAGAGCACACTTGCTGCTGTGTCTTTGAGTATG
GTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTGAGGCTGCCACCTGC
TGTGATGACCACTATAGCTGCTGCCCACATGACTATCCCATCTGTAATGT
TCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCCATTGGGAGTGAGGG
CATTACGACGCACCCCTGCTAAACCTTACTGGGCTCATGGAAATCAAGGT
GGAAGTAGCAGTGCTTAATTATAGTTGGCACTGTAAGAGCAGTGGAAGGC
CGAAGGGAGGATGAAAATATTCGCGCTTGTGAATGAGTTTCTCCCCGGCC
TTAGTTCATTCTACTGCATTTCATTCCAAACGTTAATGTACCGGCAGGTG
GATGGTCTGTTAAATATTTATTCGGACGTTGGTTCGGTATATAGCGTTGT
AAGTTATCTATCTGCGTTGAATCTGAACAATGCACAAACAAATTGTTGTT
ATCTATTTCCAATGTCCTCTACCAAATCCCTGGCGTCATTCAGCGGATGC
TTTTATGAATTGATATTTAACGAAAAATAAAAAAAAAAAA
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