EY753615

Overview
NameEY753615
Unique NameEY753615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig941 contig Csv1_Contig941:98..975. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 5.365e-91
Identity = 181/268 (67.54%), Postives = 204/268 (76.12%), Query Frame = 3
Query:   69 MSCSNL-------PVCRDTSSLSFGSFLNPFRPPHNAT--PNNPSRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWL-SXXXXXXXXXXXXEGRDCDGNGVXRDAAEDEFF 842
            MSCSNL       P   D+S+LSF S ++PF+ P++ T  P+NPSRSSSVTP+HCGLR+LR+RI+SVKNTQKITEAMKLVAAAKVRRAQEAVV  RPFSETLVEVLYNINEQLQ +DIDVPL              TGDRGLCGGFNN +IKKAEARI +LK LG+DYTIISVGKKGN+YF+RRPYIPVD+FLEG +LPTAK+AQ IADD  SLF SEE DKVELLYTKF S + S            +G  CD NG   DAA DEFF
Sbjct:    1 MSCSNLTMLVSSKPSLSDSSALSFRSSVSPFQLPNHNTSGPSNPSRSSSVTPVHCGLRDLRDRIESVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDVPLTKVRPVKKVALVVVTGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTIISVGKKGNSYFIRRPYIPVDKFLEGSNLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGNCVDAANDEFF 268          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.158e-85
Identity = 177/268 (66.04%), Postives = 198/268 (73.88%), Query Frame = 3
Query:   69 MSCSNLP---------VCRDTSSLSFGSFLNPFRPPHNATPNNPSRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWL-SXXXXXXXXXXXXEGRDCDGNGVXRDAAEDEFF 842
            M+CSNL          +  D+SSLSF S L    P + ++P  PSR+SSV+P+   LRELR+RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQ +D+DVPL              TGDRGLCGGFNN IIKKAEARI ELK LGL+YT+ISVGKKGN+YFLRRPYIPVD++LE G+LPTAKEAQ +ADD  SLF SEE DKVELLYTKF S + S            +G  CD NG   DAAEDEFF
Sbjct:    1 MACSNLTTMWVSSKPSLSADSSSLSFRSVLKC--PTNTSSP--PSRASSVSPLQASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLEAGTLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDEFF 264          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.672e-84
Identity = 173/263 (65.78%), Postives = 196/263 (74.52%), Query Frame = 3
Query:   63 ITMSCSNLPVCRDTSSLSFGSFLNPFRPP--HNATPNNPSRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWL-SXXXXXXXXXXXXEGRDCDGNGVXRDAAEDEFF 842
            +TM  S+ P   D S+LSF S  NPF+ P  ++++   PSR +S   I CGL++L+ RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLY+INEQLQ +DI+ PL              TGDRGLCGGFNN I+KKAEARIAELK LGL+YT++SVG+KGN+YF RRPYIPVDRFLEGGSLPTAKEAQTIADD  SLF SEE DKVELLYTKF S + S            +G  CD NG   DAAEDE F
Sbjct:    6 VTMLVSSKPSLPDASNLSFRSAFNPFQLPSQNSSSSCTPSRPTS---IQCGLKDLKNRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYSINEQLQTDDIESPLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEARIAELKELGLEYTVVSVGRKGNSYFNRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSNPIIHTLLPLSPKGEICDINGNCVDAAEDELF 265          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_SPIOL (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 1.049e-78
Identity = 162/252 (64.29%), Postives = 181/252 (71.83%), Query Frame = 3
Query:  108 SLSFGSFLNPFRPPHN-----ATPNNPSRSSSVTPIHCG-LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWL-SXXXXXXXXXXXXEGRDCDGNGVXRDAAEDEFF 842
            SLSF S ++ F  P       A PNN +   +  PI C  LRELR+RI SVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYN+NEQLQ ED+DVPL              TGDRGLCGGFNN ++KKAE+RIAELK LG+DYTIIS+GKKGN YF+RRP IPVDR+ +G +LPTAKEAQ IADD  SLF SEE DKVE+LYTKF S + S            +G  CD NG   DAAEDE F
Sbjct:    4 SLSFSSSVSTFHLPTTTQSTQAPPNNATTLPTTNPIQCANLRELRDRIGSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNMNEQLQTEDVDVPLTKIRTVKKVALMVVTGDRGLCGGFNNMLLKKAESRIAELKKLGVDYTIISIGKKGNTYFIRRPEIPVDRYFDGTNLPTAKEAQAIADDVFSLFVSEEVDKVEMLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGKCVDAAEDELF 255          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.519e-69
Identity = 147/259 (56.76%), Postives = 175/259 (67.57%), Query Frame = 3
Query:   69 MSCSNLPVCRDTSSLSFGSFLNPFRPPHNATPNNPSRSSSVTPIHCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWL-SXXXXXXXXXXXXEGRDCDGNGVXRDAAEDEFF 842
            MSCS+L     +S+L+  +     R        +P RS  +  + C LRELR RIDSV+NTQKITEAMKLVAAAKVRRAQEAVV+ RPFSE LVEVLYN+N+++Q EDID+PL              TG+RGLCG FNNN++KKAE RI ELK LGL YT++SVGKKGNAYF RRPYIP++R LE  S+PT K++Q I D   SLF SEE DKVELLY+KF S + S            +G  CD NGV  DA EDE F
Sbjct:    1 MSCSHLSTAWSSSALASSASTTRRR--------SPPRSGLL--VRCSLRELRTRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQTEDIDLPLTRTRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIDELKQLGLQYTVVSVGKKGNAYFQRRPYIPLERDLEVSSVPTVKDSQAICDLVYSLFVSEEVDKVELLYSKFVSLVRSDPIIQTLLPMSPKGEICDVNGVCVDATEDELF 249          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.471e-64
Identity = 144/263 (54.75%), Postives = 168/263 (63.88%), Query Frame = 3
Query:   72 SCSNLPVCRDTSSLSFGSFLNPFR--PPHNATPNNPSRSSSVTPIH--CGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSL-PTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWL-SXXXXXXXXXXXXEGRDCDGNGVXRDAAEDEFF 842
            S SN      + S SF + L P R  P  + TPN  S  S +  I    G+RELRERIDSVKNTQKITEAM+LVAAA+VRRAQ+AV+ GRPF+ETLVE+LY+IN+  Q EDID PL              TGD+GLCGGFNN + KKA  R+ ELK  G+D  +ISVGKKGNAYF RR    VD+ +EGG + PT KEAQ IADD  SLF SEE DKVEL+YTKF S + S            +G  CD  G   DA EDE F
Sbjct:   13 SPSNSNSASSSESYSFIATLKPVRYYPFQSLTPNRISSRSPLPSIQIRAGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMF 275          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_CHLRE (ATP synthase gamma chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPC PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.891e-53
Identity = 112/213 (52.58%), Postives = 142/213 (66.67%), Query Frame = 3
Query:  207 GLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWL-SXXXXXXXXXXXXEGRDCDGNGVXRDAAEDEFF 842
            GL+E+R+RI SVKNTQKIT+AMKLVAAAKVRRAQEAVVNGRPFSE LV+VLY +N++++ ED+D PL              TGDRGLCGG+NN IIKK EAR  EL  +G+   ++ VG+KG  YF RR    + +    G+ P+ KEAQ IAD+  + F ++ESDKVEL++TKF S + S             G  CD +G   DAA+DE F
Sbjct:   36 GLKEVRDRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQEDVDSPLCAVRPVKSVLLVVLTGDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFSLGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCDVDGKCVDAADDEIF 248          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_ANAVT (ATP synthase gamma chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpG PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.295e-44
Identity = 93/180 (51.67%), Postives = 127/180 (70.56%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWLS 746
            L+ +R+RI SVKNT+KITEAM+LVAAA+VRRAQE V+  RPF++ L +VLY +  +L+ ED+D+PL+             +GDRGLCGG+N N+I++AE R  ELK  GLDYT + VG+K   YF RR   P+D    G   +PTA+EA  IAD+ +SLF SE+ D++EL+YT+F S +S
Sbjct:    4 LKSIRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVIATRPFADRLAQVLYGLQTRLRFEDVDLPLLKKREVKSVGLLVISGDRGLCGGYNTNVIRRAENRAKELKKEGLDYTFVIVGRKAEQYFRRREQ-PIDASYTGLEQIPTAEEANKIADELLSLFLSEKVDRIELVYTRFVSLVS 182          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_ANASP (ATP synthase gamma chain OS=Anabaena sp. (strain PCC 7120) GN=atpG PE=3 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.691e-44
Identity = 93/180 (51.67%), Postives = 126/180 (70.00%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWLS 746
            L+ +R+RI SVKNT+KITEAM+LVAAA+VRRAQE V+  RPF++ L +VLY +  +L+ ED+D+PL+             +GDRGLCGG+N N+I++AE R  ELK  GLDYT + VG+K   YF RR   P+D    G   +PTA EA  IAD+ +SLF SE+ D++EL+YT+F S +S
Sbjct:    4 LKSIRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVIATRPFADRLAQVLYGLQTRLRFEDVDLPLLKKREVKSVGLLVISGDRGLCGGYNTNVIRRAENRAKELKAEGLDYTFVIVGRKAEQYFRRREQ-PIDASYTGLEQIPTADEANKIADELLSLFLSEKVDRIELVYTRFVSLVS 182          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP7 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7424) GN=atpG PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.870e-43
Identity = 89/179 (49.72%), Postives = 125/179 (69.83%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWLS 746
            L+ +R+RI SVKNT+KITEAM+LVAAAKVRRAQE V+  RPF++ L +VLYN+  +LQ  ++ +PL+             TGDRGLCGG+N N+IK+ E RI ELK+ G++Y ++ +G+K   YF RR      ++ E   +P+A EA TI+D+ +SLF SE  D+VEL+YT+F S +S
Sbjct:    4 LKFIRDRIQSVKNTKKITEAMRLVAAAKVRRAQEQVIATRPFADALAQVLYNLQNRLQFGEVSLPLLTQREIKTVAVLVVTGDRGLCGGYNANVIKRTEQRIKELKSQGINYKLVLIGRKAVQYFERRNAPIQTKYTELSQIPSASEASTISDELLSLFLSETVDRVELIYTRFLSLIS 182          
The following BLAST results are available for this feature:
BLAST of EY753615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_TOBAC5.365e-9167.54ATP synthase gamma chain, chloroplastic OS=Nicotia... [more]
ATPG1_ARATH1.158e-8566.04ATP synthase gamma chain 1, chloroplastic OS=Arabi... [more]
ATPG_PEA1.672e-8465.78ATP synthase gamma chain, chloroplastic OS=Pisum s... [more]
ATPG_SPIOL1.049e-7864.29ATP synthase gamma chain, chloroplastic OS=Spinaci... [more]
ATPG_MAIZE1.519e-6956.76ATP synthase subunit gamma, chloroplastic OS=Zea m... [more]
ATPG2_ARATH1.471e-6454.75ATP synthase gamma chain 2, chloroplastic OS=Arabi... [more]
ATPG_CHLRE9.891e-5352.58ATP synthase gamma chain, chloroplastic OS=Chlamyd... [more]
ATPG_ANAVT1.295e-4451.67ATP synthase gamma chain OS=Anabaena variabilis (s... [more]
ATPG_ANASP1.691e-4451.67ATP synthase gamma chain OS=Anabaena sp. (strain P... [more]
ATPG_CYAP71.870e-4349.72ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753615 ID=EY753615; Name=EY753615; organism=Citrus sinensis; type=EST; length=878bp
TCTTTCCCTTCTCTTTGAGTGCTTAGACTCTCACCTTGAGCTCCAACAAT
CCGTTATCAGTTATCACCATGTCTTGCTCAAACCTACCTGTGTGTCGTGA
CACTTCTTCGCTCTCTTTTGGCTCATTTCTCAACCCATTTAGGCCTCCTC
ACAATGCAACCCCCAACAACCCTTCTAGATCTTCATCAGTTACTCCAATT
CATTGTGGTCTCCGCGAGCTCAGAGAACGTATTGATTCTGTAAAGAACAC
ACAGAAGATCACCGAGGCCATGAAGCTTGTGGCCGCTGCTAAAGTCAGAA
GAGCTCAGGAAGCTGTTGTCAATGGCAGGCCTTTCTCTGAAACTCTTGTT
GAGGTTCTTTACAACATCAATGAGCAGCTTCAAAATGAAGACATAGATGT
TCCTTTGATCAAAGTTAGACCTGTCAAGAAAGTTGCTTTGGTTGTTGTCA
CTGGTGATCGTGGTCTTTGTGGTGGTTTCAACAACAATATTATTAAGAAA
GCTGAAGCGAGAATTGCAGAATTGAAGACTCTTGGACTTGATTACACTAT
TATTAGTGTTGGTAAGAAGGGTAATGCATATTTCCTTCGTAGGCCTTATA
TTCCTGTTGATAGATTTCTTGAGGGAGGTTCATTACCTACTGCTAAAGAA
GCTCAGACTATAGCAGATGATGNTGTTTCACTCTTTTGTAGTGAAGAAAG
TGACAAGGTGGAGCTTTTATACACAAAGTTTGGGTCTTGGTTAAGTCTGA
TCCTGTGNATCACACTTTGCTNCACTATCACCGAGGGGAGAGATTGTGAT
GGGAATGGGGTTNNGCGTGATGCTGCTGAGGATGAATTCTTTGATTGACA
CTAAGGAGGAAATTTACTGTTGAAAAAA
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