EY753606

Overview
NameEY753606
Unique NameEY753606
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753606_ssr48 microsatellite EY753606_ssr48:48..73. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13103 contig Csv1_Contig13103:40..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753606 vs. ExPASy Swiss-Prot
Match: Y3721_ARATH (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18
Identity = 52/133 (39.10%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  217 DSAAAMKMDLSSPFGSNSEKLAIPPS----PVKQAATVNAFR-DLGSKEETFFDSQPWLDSDCEDDFYSVNGDFTPSRGNTPVHHNFAGAPQVNSTSLPDKTPG-SISEPSPTGKKPKLAELFPQISKEGSED 597
            D+ + +   +   F S  +  +IP +    PVK   + ++ +   GSK+ETFFDSQPWL SD +DDF+SVNGDFTPS GNTP        P+ ++    +K P    S P+P  ++ KL ELF    +E  E+
Sbjct:   34 DNVSILSPSVKKSFESPRKSTSIPANNNLTPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTPKSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIREEREE 166          
The following BLAST results are available for this feature:
BLAST of EY753606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3721_ARATH6.770e-1839.10Uncharacterized protein At3g27210 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-G08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753606 ID=EY753606; Name=EY753606; organism=Citrus sinensis; type=EST; length=796bp
AACGACTCCTACTGATACTGGGTCTTGTTTTGTATCATTCACTTTCGCTC
TCTCTCTCTCTCTCTCTCTCTCTGTTCTGGTGCCTCTACAGAAGAAGATT
TTCTGATGCTAAGAGCGTCGCTGGCTTCTTAGTTTTATTTTACCTTTTGT
CAATTTAAATAAAGAGAATTTAGAGACATGGGTTCGTGCGTATCATCAGC
ACACAAGAGAACAGCAGACTCAGCCGCTGCCATGAAAATGGACTTATCAT
CACCATTTGGGTCCAATAGTGAGAAACTTGCGATTCCACCTTCCCCCGTG
AAACAAGCGGCGACAGTCAACGCGTTTAGAGACCTTGGTAGTAAAGAGGA
AACCTTTTTCGATTCTCAACCATGGCTAGATTCTGACTGCGAAGATGATT
TTTACAGTGTCAATGGAGATTTTACCCCATCTCGTGGCAATACTCCAGTC
CATCACAACTTTGCAGGGGCTCCTCAAGTCAACAGCACTTCTCTTCCGGA
CAAAACTCCCGGTTCCATTTCTGAACCATCCCCAACAGGAAAGAAACCGA
AACTAGCTGAACTGTTCCCGCAAATTTCTAAAGAAGGTTCAGAAGACCAA
CATGGTGATGAACAAAACACCCAAGGTAGCCAAAACACGGCCAATGGGAA
GACAGAAATTAGGACACCTATACTTGATGTACTTCCATCAACAAATGGTA
CCCAATATTGTTCTGGAGTTAACTCTGTGTGTAGAAGGGAAGGACCTCCT
ATGGGATTCTTTGATGGGAGACAGCCCATGAAATGGCCCATTGTGC
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