EY753592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753592 vs. ExPASy Swiss-Prot
Match: IF41_WHEAT (Eukaryotic initiation factor iso-4F subunit p82-34 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.550e-48 Identity = 117/248 (47.18%), Postives = 151/248 (60.89%), Query Frame = 1 Query: 142 LPPHGGVASAF-KMGDLRFEGHERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQA------RYLEADNRDWRTRSTTSG-----QEKSLEANQEKMEFGAHEGQLNSQFASAQISTNQGA--GPAPALIKAEVPWSARRGNLSEKDRVLKNCKGILNKLTPEKFDVLKGQLIDSGIQPXIF*RVVLNLYLKGLSWSLHFGP-WLHFYALT*QRASSISFEEPGGK 840 L PHGG AS ++GDL E ERVRY+R+QLL L+++ +TE IL+++QEIE+E +G+ QSW N LQ+Q Q R+ E DNRDWR R+ +EKS + +E E G+ QF S++Q A GP PALIKA+VPWSARRGNLSEKDRVLK KGILNKLTPEKFD+LKGQL+DSGI + V++L + + F P + + + EEPGGK Sbjct: 40 LRPHGGGASGVSRIGDLHSESRERVRYSRDQLLDLRKITDVTEQILRLQQEIEAELNGDDQSWVRNDSNVQLQTQAQPQVQAQNRFTETDNRDWRARTEKPPAPAVQEEKSWDNIREVKEQYNASGRQQEQFNRQDQSSSQKAQVGPPPALIKADVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLLDSGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSELNDNLPTFPSEEPGGK 287
BLAST of EY753592 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.146e-24 Identity = 67/189 (35.45%), Postives = 101/189 (53.44%), Query Frame = 1 Query: 202 HERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQARYLEADNRDWRTRSTTSGQEKSLEAN----QEKMEFGAHEGQLNSQFASA--------QISTNQGAGPAPALIKAEVPWSARRGNLSEKDRVLKNCKGILNKLTPEKFDVLKGQLIDSGIQPXIF*RVVLNL 732 H+R+ YTR+QLLQL + ++ +DILK Q+I E +GE + G AE +++Q+ R+ D+RDW + S + E+ N +E G + + N S+ + + LIKAEVP S +RG +S KD VLK K ILN +P+ FD+ KGQLI++ I + V+NL Sbjct: 235 HQRISYTRDQLLQLCQNVEVPKDILKFCQDINVELNGEDKISGFGAEKDHVQTPSYKRFDATDSRDWHSWSAQTNWEQKFWDNFSEAKEPYSLGWKQEKFNKPDQSSFHFDSKDQWLKFIKCTPCKSTLIKAEVPLSIQRGIISGKDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDVINL 423 HSP 2 Score: 32.3426 bits (72), Expect = 1.146e-24 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 3 Query: 708 ILKGGIELIFERAVLEPTFWPMVALLCSDLTKSFLHF 818 ILK I LIFE+ V EP F A LC+ L ++ F Sbjct: 416 ILKDVINLIFEKVVAEPAFCSTYAQLCTYLNQNLTPF 452 The following BLAST results are available for this feature:
BLAST of EY753592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753592 ID=EY753592; Name=EY753592; organism=Citrus sinensis; type=EST; length=882bpback to top |