EY753590

Overview
NameEY753590
Unique NameEY753590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13113 contig Csv1_Contig13113:1..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY753590 vs. ExPASy Swiss-Prot
Match: TL225_ARATH (Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.322e-68
Identity = 130/150 (86.67%), Postives = 141/150 (94.00%), Query Frame = 3 
Query:  291 LADLNKYEAETRGEFGIGSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQALCKFANGTNPITGVSTRKAL 740
            +A+LN++EA+TRGEFGIGSAAQ+GSADL K VH  ENFRRANFTSADMRESDFSGS FNGAYLEKAVAYKANF+GADLSDTLMDRMVLNEANLTNAVLVR+VLTRSDLGGA IEGADFSDAVIDL QKQALCK+A GTNP+TGV TRK+L
Sbjct:   89 MAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSL 238
The following BLAST results are available for this feature:
BLAST of EY753590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TL225_ARATH1.322e-6886.67Thylakoid lumenal protein At1g12250, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-F04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753590 ID=EY753590; Name=EY753590; organism=Citrus sinensis; type=EST; length=894bp
CTGCTTATATACTGTCATGGCGCTTTCTTCAATCCCCCCACTATCCATTA
AATCTCTGAACTTCTGCTCTTCATCTTCAAAGGGTCCGTATCAGCTGCAT
GCCCTGTCAAAGCCACTTTGGGTAGCCTGTCAAATAAGCTCCAAGACTGA
GAGTGAAGGCCAATTTCCTGGAAGATTGTTCCAACAATCAGTGTGCAGGC
CCATATGCAAAACTAAAGAACTGGCGAGTTTTTGTGTCGACTGCATTAGC
AGCTGCGGTGGTTGCATCGTGCAGCTCTAACATCTCTGCTCTTGCTGATC
TTAATAAGTACGAGGCAGAAACTCGCGGGGAATTTGGCATAGGGTCAGCT
GCCCAATTCGGTTCTGCAGATCTCAGGAAAGCAGTACATGTGAAAGAAAA
TTTCAGAAGAGCAAATTTCACATCAGCCGATATGAGAGAATCTGATTTCA
GTGGTTCAAAATTCAATGGTGCATATCTTGAGAAAGCTGTTGCATATAAG
GCCAATTTTACAGGTGCGGATTTAAGTGACACATTAATGGATCGCATGGT
ACTTAACGAAGCTAATCTCACGAATGCTGTACTTGTTAGAACAGTACTAA
CTCGAAGTGATCTTGGAGGTGCCATTATTGAAGGTGCTGATTTTAGTGAT
GCTGTTATAGATCTTGCACAGAAGCAGGCTCTTTGCAAGTTTGCAAATGG
AACAAATCCAATAACAGGAGTGAGCACCAGAAAAGCCCTAGTTGTGGAAA
TAGCCGAAGGGATGCGTATGGGTCCCCTTCATCTCCTCTGTTAAGTGCTC
CACCTCAAAGTTGCTTGGATCGGAAGGGTTTCTGGGACTCCGGCCCGGGA
CTTTGGGAAGCTAATAATTTCGCTGACTTGGAAGTGGGCTGGAA
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