EY753588

Overview
NameEY753588
Unique NameEY753588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI2_HUMAN (ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.954e-35
Identity = 83/205 (40.49%), Postives = 121/205 (59.02%), Query Frame = 1
Query:   31 VVXDFEATCDTD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 594
            +V DFE+TC  D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P  + +LS+FC +LTGI+Q QVD GV L   L +  KW+   +  KN  FA                VTWS+WD  V LE EC+ K++ KP + N WI+L+  +   +      L  A++  G+ + GR H GLDD++NTA L   ++  G    IT SL
Sbjct:   38 IVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI2_MOUSE (ERI1 exoribonuclease 2 OS=Mus musculus GN=Eri2 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.041e-34
Identity = 81/205 (39.51%), Postives = 119/205 (58.05%), Query Frame = 1
Query:   31 VVXDFEATCDTD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 594
            +V DFE+TC  D K+    EIIEFP+V++++ TG++E+ F  YV+P  + +LS+FC +LTGI+Q+QVD GV L   L +  KW+     + T +FA                VTWS+WD  V LE ECR K++ KP + N WI+L+  +   +      L  A++  G+ + GR H GLDD++NTA L   ++  G    IT SL
Sbjct:   38 IVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI2_XENLA (ERI1 exoribonuclease 2 OS=Xenopus laevis GN=eri2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.502e-33
Identity = 80/204 (39.22%), Postives = 117/204 (57.35%), Query Frame = 1
Query:   31 VVXDFEATCDTDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE----NKGI------------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 594
            ++ DFE+TC  D     QEIIEFP+V+++   G++E+ F TYV+P  + +LSDFC +LTGI Q QVD GV L   L + + W++     KGI            ++   A VTWS+WD  V L  ECR K++ KP   N WI+L+  +   +      L  A++  G+ + GR H GLDD++NTA+L + ++  G    IT SL
Sbjct:   39 IIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDFCTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTWSDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGREHSGLDDSRNTAKLASRMICDGCVMKITKSL 242          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI1_HUMAN (3'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 7.532e-30
Identity = 69/191 (36.13%), Postives = 107/191 (56.02%), Query Frame = 1
Query:   34 VXDFEATCDTDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 594
            + DFEATC+    P +  EIIEFP V++++ T ++E  FQ YVRP  N  LSDFC  LTGI Q QVDR  T  + L +   W++ K +     ++++T  +WD    L  +C+  ++  PP+  +WIN++  +   +   R   K  +  E  G+ + GR HCGLDD+KN AR+   ++  G +  I   +
Sbjct:  132 IIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINEKM 322          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI3_HUMAN (ERI1 exoribonuclease 3 OS=Homo sapiens GN=ERI3 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.192e-29
Identity = 73/190 (38.42%), Postives = 108/190 (56.84%), Query Frame = 1
Query:   28 FVVXDFEATCDTDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 588
            F+V DFEATCD  +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN A ++  L +RGF F  T+
Sbjct:  146 FLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI3_BOVIN (ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.192e-29
Identity = 73/190 (38.42%), Postives = 108/190 (56.84%), Query Frame = 1
Query:   28 FVVXDFEATCDTDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 588
            F+V DFEATCD  +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN A ++  L +RGF F  T+
Sbjct:  146 FLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI3_MOUSE (ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.862e-29
Identity = 73/190 (38.42%), Postives = 107/190 (56.32%), Query Frame = 1
Query:   28 FVVXDFEATCDTDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 588
            F+V DFEATCD  +  +PQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  +C +  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN A ++  L +RGF F  T+
Sbjct:  146 FLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI2_DANRE (ERI1 exoribonuclease 2 OS=Danio rerio GN=eri2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.423e-28
Identity = 76/204 (37.25%), Postives = 110/204 (53.92%), Query Frame = 1
Query:   22 SDFVVXDFEATCDTDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL----ENKGI-----------KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITN 588
            S  ++ DFE+TC  +K+   QEIIEFP+V++S  +G +E+ F +YV+P    +LS FC +LTGI Q QVD    L   L R  +WL    E +G+                A VTWS+WD  V L  EC+ K++  P     WI+L+  +   +      L+ A+   G+ + GR H GL DA+NTA L   +M  G + SIT+
Sbjct:   33 SFLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPVLSAFCTELTGITQDQVDSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQLCAFVTWSDWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIEFTGREHSGLVDARNTALLAQRMMTDGCQLSITS 236          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI1_MOUSE (3'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 9.207e-28
Identity = 67/193 (34.72%), Postives = 108/193 (55.96%), Query Frame = 1
Query:   34 VXDFEATCDTDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLM 597
            + DFEATC+ + NP  +  EIIEFP V++++ T ++E  FQ YVRP  N  LS+FC  LTGI Q QVDR     + L +  +W+++K +     + ++T  +WD    L  +CR  ++  P +  +WIN++  +   +   R   K  +  E  G+ + GR H GLDD+KN AR+   ++  G +  I   ++
Sbjct:  128 IIDFEATCE-EGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKIL 319          
BLAST of EY753588 vs. ExPASy Swiss-Prot
Match: ERI1_RAT (3'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Eri1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.794e-27
Identity = 66/192 (34.38%), Postives = 107/192 (55.73%), Query Frame = 1
Query:   34 VXDFEATCDTDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGI-KNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 594
            + DFEATC+ + NP  +  EIIEFP V++++ + ++E  FQ YVRP  N  LS+FC  LTGI Q QVDR     + L +  +W+++K +     + ++T  +WD    L  +C+  ++  P +  +WIN++  +   +   R   K  +  E  G+ + GR H GLDD+KN AR+   ++  G +  I   L
Sbjct:  128 IIDFEATCE-EGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRINEKL 318          
The following BLAST results are available for this feature:
BLAST of EY753588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERI2_HUMAN5.954e-3540.49ERI1 exoribonuclease 2 OS=Homo sapiens GN=ERI2 PE=... [more]
ERI2_MOUSE5.041e-3439.51ERI1 exoribonuclease 2 OS=Mus musculus GN=Eri2 PE=... [more]
ERI2_XENLA2.502e-3339.22ERI1 exoribonuclease 2 OS=Xenopus laevis GN=eri2 P... [more]
ERI1_HUMAN7.532e-3036.133'-5' exoribonuclease 1 OS=Homo sapiens GN=ERI1 PE... [more]
ERI3_HUMAN2.192e-2938.42ERI1 exoribonuclease 3 OS=Homo sapiens GN=ERI3 PE=... [more]
ERI3_BOVIN2.192e-2938.42ERI1 exoribonuclease 3 OS=Bos taurus GN=ERI3 PE=2 ... [more]
ERI3_MOUSE2.862e-2938.42ERI1 exoribonuclease 3 OS=Mus musculus GN=Eri3 PE=... [more]
ERI2_DANRE2.423e-2837.25ERI1 exoribonuclease 2 OS=Danio rerio GN=eri2 PE=2... [more]
ERI1_MOUSE9.207e-2834.723'-5' exoribonuclease 1 OS=Mus musculus GN=Eri1 PE... [more]
ERI1_RAT7.794e-2734.383'-5' exoribonuclease 1 OS=Rattus norvegicus GN=Er... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-F02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753588 ID=EY753588; Name=EY753588; organism=Citrus sinensis; type=EST; length=930bp
ATTCCAAGGCTGACCCACGCGTCCGATTTTGTGGTTANAGACTTTGAGGC
TACTTGCGACACGGACAAGAATCCTTATCCCCAGGAGATAATCGAGTTTC
CATCTGTCATTGTGAGTAGTGTAACTGGTCAACTGGAAGCATGTTTTCAG
ACATATGTGCGGCCGACTTGCAATCAACTACTGAGTGATTTCTGCAAGGA
TCTGACAGGTATCCAGCAAATTCAGGTGGACAGAGGTGTTACTCTAAGCG
AGGCTTTACTTAGGCATGACAAATGGCTTGAGAATAAGGGCATAAAAAAC
ACCAACTTTGCTGTCGTGACATGGTCAAATTGGGATTGTCGGGTAATGTT
GGAATCTGAATGCCGATTCAAAAAGATTTGGAAACCTCCTTATTTTAACA
GATGGATCAACTTAAAAGTTCCATTTCATGAGGTTTTTGGTGGAGTGAGG
TGCAATTTAAAAGAAGCTGTTGAGATGGCAGGCCTGGCATGGCAAGGCCG
TGCACACTGTGGCCTAGATGATGCCAAAAATACTGCTCGCCTACTTGCAC
TCCTCATGCACAGAGGTTTCAAATTCTCCATTACCAACTCTTTGATGTGG
CAAACAAATGATGGTTTTCTGACCTGGGATCAGTTCCCTGAACGCATATT
TCTTCCCCCCCATCGTTGCCCAAACAAAAGGATCTTGCAAATTCCCTATT
CCAAGTTTATTCTCATTTGTCTTTGGGGGGGGGAAAACCTCATAGGGTTG
GGTTCGGAAGCCTGGGACCAAAACAGGGAGGTGTTTTTTTGTGGGGCGGT
AACTGTGCCGGGACCCATGGGCGCCCCGGTGGTTTTCTTTTGAGGGGCCT
TTAACACTGGTTGCCCTGCAATTTTGGAAGGTTTCTNCCTTCTTTCTTGG
GAACGTTTAACANCTATAAAAACGAAAAAA
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