EY753578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH7_ARATH (DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana GN=RH7 PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.386e-41 Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 1 Query: 412 HPNAVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 +PNAVS+F+IS PLREKLK+ GIE+LFPIQA TFDMVLDG+DL GRARTGQGKTL FVLPILESL NGP K+ +K GYGR+P VLVLLPTR L + + + G L+SCCL+GG SY E KLK+G+ Sbjct: 94 NPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVA-ADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGV 225
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH7_ORYSJ (DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica GN=Os09g0520700 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.990e-36 Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = 1 Query: 415 PNAVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 PNA++ F+IS LREKLKSKGI++LFPIQA TFD+VLDG DL GRARTGQGKTL FVLPILESL NG KAS++T YGR P VLVLLPTR L + A G L++CC++GG Y E ++KG+ Sbjct: 114 PNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFG-LSACCVYGGSDYRSQEMAIRKGV 244
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH7_SPIOL (DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea GN=RH7 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.835e-32 Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = 1 Query: 415 PNAVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 PN++S F+IS PL++ L SKGI++LFPIQAMTFD V+DG DL GRARTGQGKTL FVLPI+ESL NG TK +++G+GR P VLVLLPTR L T + + G LT+C ++GG ++ L +G+ Sbjct: 106 PNSLSNFRISKPLKDVLISKGIKALFPIQAMTFDNVIDGCDLVGRARTGQGKTLAFVLPIVESLVNGRTKDLRRSGHGRLPSVLVLLPTRELA-TQVLADFQVYGGAVGLTACSVYGGAPFHSQISSLTRGV 236
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: DDX21_RAT (Nucleolar RNA helicase 2 OS=Rattus norvegicus GN=Ddx21 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 A S F IS + LK++G+ LFPIQA TF V G DL +ARTG GKT F +P++E L G + + GRAP VLVL PTR L S + L+ C +GG Y G +++ G+ Sbjct: 183 AFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKR----GRAPQVLVLAPTRELANQVSKDFSDITK---KLSVACFYGGTPYGGQIERMRSGI 305
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: DDX21_MOUSE (Nucleolar RNA helicase 2 OS=Mus musculus GN=Ddx21 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16 Identity = 52/130 (40.00%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 A S F IS + LK++G+ LFPIQA TF V G DL +ARTG GKT F +P++E L G + + GRAP VLVL PTR L S + L+ C +GG Y G +++ G+ Sbjct: 259 AFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKR----GRAPQVLVLAPTRELANQVSKDFSDITK---KLSVACFYGGTPYGGQIERMRSGI 381
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: DDX21_HUMAN (Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5) HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15 Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 A S F IS + LK +G+ LFPIQA TF V G DL +ARTG GKT F +P++E L +G + K+ GRAP VLVL PTR L S + L+ C +GG Y G +++ G+ Sbjct: 187 AFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKL-HGELQDRKR---GRAPQVLVLAPTRELANQVSKDFSDITK---KLSVACFYGGTPYGGQFERMRNGI 309
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH53_ARATH (DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.359e-14 Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGG 768 A+S IS + + L SKGIE LFPIQ + ++G D+ GRARTG GKTL F +PI++ + K + K G GR P LVL PTR L + L + CL+GG Sbjct: 105 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI----IKYNAKHGRGRNPLCLVLAPTRELARQVEKE---FRESAPSLDTICLYGG 213
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: DDX50_MOUSE (ATP-dependent RNA helicase DDX50 OS=Mus musculus GN=Ddx50 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.222e-13 Identity = 48/130 (36.92%), Postives = 65/130 (50.00%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 A S F IS + LK +G+ LFPIQ TF V +G DL +ARTG GKT F +P++E L K R+P VLVL PTR L + + L+ C +GG SY +++ G+ Sbjct: 135 AFSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKK----SRSPKVLVLAPTRELANQVAKDFKDITR---KLSVACFYGGTSYQSQINQIRNGI 257
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: DDX50_HUMAN (ATP-dependent RNA helicase DDX50 OS=Homo sapiens GN=DDX50 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.723e-13 Identity = 48/130 (36.92%), Postives = 64/130 (49.23%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 A S F IS + LK +G+ LFPIQ TF V +G DL +ARTG GKT F +P++E L K R+P VLVL PTR L + + L+ C +GG SY ++ G+ Sbjct: 138 AFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKK----SRSPKVLVLAPTRELANQVAKDFKDITR---KLSVACFYGGTSYQSQINHIRNGI 260
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH9_ARATH (DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana GN=RH9 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13 Identity = 45/116 (38.79%), Postives = 63/116 (54.31%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGG 768 A++ IS + + LK +GIE LFPIQ + ++G D+ GRARTG GKTL F +PI++ + K + K G G+ P LVL PTR L + L + CL+GG Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI----IKFNAKHGRGKNPQCLVLAPTRELARQVEKE---FRESAPSLDTICLYGG 225 The following BLAST results are available for this feature:
BLAST of EY753578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753578 ID=EY753578; Name=EY753578; organism=Citrus sinensis; type=EST; length=895bpback to top |