EY753574

Overview
NameEY753574
Unique NameEY753574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6440 contig Csv1_Contig6440:1..503. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 6.037e-40
Identity = 80/114 (70.18%), Postives = 91/114 (79.82%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            DFI  FIRYALS +AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APDTKMF++    +ELNQM               L+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct:  847 DFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.139e-38
Identity = 78/114 (68.42%), Postives = 88/114 (77.19%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D I  FIRYALS +AWDLV E+RIAFTRKKDFGKE+REL+WAHAQRTLHGL  PDTK+FSE   F ELNQ+               L+TLKGHVESVV+LKGLDI+TIQQ+YTV
Sbjct:  844 DIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKLFSEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA2_SOLLC (Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.537e-38
Identity = 78/114 (68.42%), Postives = 87/114 (76.32%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D I   IRYALS +AWDLV+EQRIAFTRKKDFGKE+REL+WAHAQRTLHGL  PD K+FSE   F ELNQ+               L+TLKGHVESVV+LKGLDI+TIQQSYTV
Sbjct:  591 DIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIKLFSEATNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.313e-38
Identity = 78/114 (68.42%), Postives = 87/114 (76.32%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D I   IRYALS +AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APD KMF E   F EL+QM               L+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct:  843 DIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.651e-38
Identity = 79/114 (69.30%), Postives = 86/114 (75.44%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D I   IRYALS KAWDLV+EQRIAFTRKKDFGKE REL+WAHAQRTLHGL  PD K+FSE   F ELNQ+               L+TLKGHVESVV+LKGLDI+TIQQSYTV
Sbjct:  843 DLIKFLIRYALSGKAWDLVLEQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPKIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.380e-38
Identity = 78/114 (68.42%), Postives = 86/114 (75.44%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D     IRYALS KAWDLVIEQRIAFTRKKDFGKE+REL+WAHAQRTLHGL  PD K+FSE   F ELNQ+               L+TLKGHVESVV+LKGLDI+TIQQ+YTV
Sbjct:  843 DLXXFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPKIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.068e-28
Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPD---TKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D    FIR+ LS +AWD ++E +IAFT KKD+G+EERE +WA AQRTLHGL  P+     +F++ + + EL+++               LNTLKGHVESVV+LKGLDIDTIQQ+YTV
Sbjct:  835 DIFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 6.924e-28
Identity = 64/115 (55.65%), Postives = 78/115 (67.83%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLH-APDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D +   IRY LS KAW  ++E + AFT KKD+GKEERE +WA AQRTLHGL  A    +F+E N ++EL+Q+               +NTLKGHVESVV+LKGLDIDTIQQ YTV
Sbjct:  835 DLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.924e-28
Identity = 62/115 (53.91%), Postives = 80/115 (69.57%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPD-TKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D +   IRY LS KAW+ +++ + AFT KKD+GKEERE +WA AQRTLHGL  P+ T +F+E N + EL+++               L+TLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct:  838 DIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA8_ARATH (ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.909e-26
Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D +   IRYAL+ KAWD +I Q+ AFT KKD+GK ERE +WA AQRTLHGL  P+  MF+++    EL+++               L+TLKGHVESVV+LKGLDIDTIQQ YTV
Sbjct:  838 DILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA-MFNDNK--NELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948          
The following BLAST results are available for this feature:
BLAST of EY753574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PMA4_ARATH6.037e-4070.18ATPase 4, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_NICPL1.139e-3868.42Plasma membrane ATPase 1 OS=Nicotiana plumbaginifo... [more]
PMA2_SOLLC2.537e-3868.42Plasma membrane ATPase 2 (Fragment) OS=Solanum lyc... [more]
PMA11_ARATH3.313e-3868.42ATPase 11, plasma membrane-type OS=Arabidopsis tha... [more]
PMA1_SOLLC5.651e-3869.30Plasma membrane ATPase 1 OS=Solanum lycopersicum G... [more]
PMA3_NICPL7.380e-3868.42Plasma membrane ATPase 3 OS=Nicotiana plumbaginifo... [more]
PMA1_ORYSJ1.068e-2852.99Plasma membrane ATPase OS=Oryza sativa subsp. japo... [more]
PMA5_ARATH6.924e-2855.65ATPase 5, plasma membrane-type OS=Arabidopsis thal... [more]
PMA4_NICPL6.924e-2853.91Plasma membrane ATPase 4 OS=Nicotiana plumbaginifo... [more]
PMA8_ARATH2.909e-2655.26ATPase 8, plasma membrane-type OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753574 ID=EY753574; Name=EY753574; organism=Citrus sinensis; type=EST; length=518bp
GGNATTCCAAACCCGACCCACGCGTCCGGATTTTATTATGNTCTTCATCA
GATATGCTTTGAGCGCGAAGGCGTGGGATCTTGTCATTGAGCAAAGGATT
GCCTTCACAAGGAAGAAGGATTTTGGTAAAGAAGAACGTGAGCTTAAATG
GGCACATGCACAGAGAACCCTCCACGGGTTACACGCACCTGATACAAAGA
TGTTCAGTGAACACAACAAGTTCACAGAACTTAACCAGATGGCTGAAGAG
GCAAAACGAAGAGCTGAGATTGCAAGATTGAGAGAACTGAATACTCTGAA
AGGGCATGTTGAATCAGTGGTTAGGCTGAAAGGTCTGGATATCGACACGA
TTCAGCAATCTTATACCGTCTGATAGAGATCATACATGAACATGGAAACA
TATGTTGTAGTTGAGAACTGATATTAAAGCCACATAAATTATCATCCTAA
TGTATAAGCCTTTAGTCCACCTGTATTTATTATATCATCATCCTTTGCAG
TTAAAAAAAAAAAAAAAA
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