EY753571

Overview
NameEY753571
Unique NameEY753571
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753571 vs. ExPASy Swiss-Prot
Match: SIN3_ARATH (Paired amphipathic helix protein Sin3 OS=Arabidopsis thaliana GN=SIN3 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.154e-24
Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = 1 
Query:   55 DDHVYKSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHADRDLSVDRPDPDHDRVLLK 390
            DD VYKSFLDILNMYR+++KSITEVYQEV  LF+DH DLL EFTHFLPD+S  ASI   PS + S+ R+R  ++        DKK+R +  H D D   +  D D +R + K
Sbjct:  138 DDRVYKSFLDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASI---PSVKTSV-RERGVSL-------ADKKDRIITPHPDHDYGTEHIDQDRERPIKK 238
The following BLAST results are available for this feature:
BLAST of EY753571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SIN3_ARATH9.154e-2453.57Paired amphipathic helix protein Sin3 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753571 ID=EY753571; Name=EY753571; organism=Citrus sinensis; type=EST; length=850bp
CCACGCGTCCGAGAAAGAATGGCTATGGCTTCACATGCTGACCGGGACCT
CAGTGATGATCATGTTTATAAATCATTTTTAGACATTTTGAACATGTACA
GAAAGGAAAACAAGTCCATCACTGAAGTCTACCAGGAGGTTGAAGCACTT
TTCCAAGATCATCCAGATCTGCTTGAGGAGTTTACACATTTTCTGCCAGA
TTCTTCAGGAGCAGCATCAATTCATTATGTTCCATCTGGAAGGAATTCTA
TACTCCGGGATAGGAGCTCGGCCATGCCCACAGCGCGGCAAGTGCATGTT
GACAAGAAAGAAAGGGCTATGGCTTCACATGCTGACCGGGACCTCAGTGT
GGACCGTCCTGATCCCGATCATGATAGGGTCCTGCTGAAGTCAGACAAAG
ACCAAAGGAGGCGTGGGGAAAAAGAAAGGGAAAGGAGAGATGACCATAGA
AGAGAACGAGAACGAGATGATAGAGATTTTGAGAATGATGTAAATAGAGA
CTTCAGCATGCAACGGTTTCCCCACAAGAGAAAATCTGCTCGTAAAATTG
AAGACTCAACTGCTGAACCGTTGCATCAAGGTGGGGGAAGGTGATGAGAA
CTTTGGAATGCATCCTGTTTCATCCTCTTATGATGATAAAAATGCCATGA
AAAGTATGTTCAGCCAGAAGCTCTCTTTCTGTGAGAAAGTCAAGGATAAG
TTACGTGATGATTACCAGGAGTTTCTGAAGTGCCTTCCTCTCTTTACAAG
GAAATTATCCACAATCAGAGTGGCATCTTTGGTGGGCGACTTGCTTGGGA
GATTCCAAATTTATGGGTGGGGTCAATGGATTTTGGGCACTTGCAAAAAA
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