EY753564

Overview
NameEY753564
Unique NameEY753564
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753564 vs. ExPASy Swiss-Prot
Match: Y1934_ARATH (Uncharacterized protein At1g09340, chloroplastic OS=Arabidopsis thaliana GN=At1g09340 PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 2.054e-80
Identity = 158/246 (64.23%), Postives = 185/246 (75.20%), Query Frame = 2 
Query:  140 MASTVVVQHQTQPXXXXXXXXXXXXNGTRIHSQIQYRRKVLQPKVGLQITASSEKNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVXPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK-AIQSPYWNQKA*LDFFRPVFYLVPLNYTL*KGVFHVGKRAANSIPGSESNNHLS 874
            MA  +++Q Q QP            NG ++H Q+QY+RKV QPK  L ++ASSEK ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKDYDFVKSSLSA+GFDVVYDINGREA+EV PIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE D VDPKSRHKGK   +S   ++       RPV+   PLNY   +  F    +A   IP   S   +S
Sbjct:    1 MAKMMMLQ-QHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQIS 245
The following BLAST results are available for this feature:
BLAST of EY753564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1934_ARATH2.054e-8064.23Uncharacterized protein At1g09340, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753564 ID=EY753564; Name=EY753564; organism=Citrus sinensis; type=EST; length=917bp
GGGTCATTGTCTTATCCAAACTGTAAGGAATGAGAGAGAACCCAGGAGTG
ATGAAATGGGCACAGCCAGAATCTTTCAAAATTTCATTAAACCAAGTCCC
TCCAATACCAAGTTGAGAGGCAGAGGCTAAGCAGCAACCATGGCAAGCAC
GGTGGTTGTGCAGCACCAAACACAGCCTTCTTTCTCCACCCTCACTTCGT
CTCTTTCTGACTTCAATGGCACTAGAATCCACTCTCAAATTCAGTATAGG
AGAAAGGTGTTGCAGCCAAAAGTAGGGCTGCAAATTACAGCTTCTAGTGA
AAAGAACATTCTTATAATGGGAGGAACTCGATTCATTGGTGTATTTCTTT
CAAGACTCCTAGTCAAAGAGGGTCATCAGGTGACCTTGTTTACTAGGGGA
AAGGCACCAATCGCCCAACAATTGCCCGGTGAATCAGACCAGGAATTCGC
CGAATTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGAAAGGACTATG
ATTTTGTGAAATCCAGTCTCTCTGCCAAAGGCTTTGATGTTGTTTATGAT
ATAAATGGACGAGAGGCAGATGAAGTCNAACCCATATTGGATGCACTGCC
AAATCTAGAACAGTTCATCTACTGCTCCTCAGCTGGTGTTTATCTNAAAT
CTGACCTTTTACCACACTGTGAGACCGACACTGTTGATCCAAAGAGCAGG
CACAAGGGGAAAGCTATACAGAGTCCGTACTGGAATCAAAAGGCGTGACT
GGACTTCTTTAGGCCAGTCTTTTATTTGGTNCCCTTGAACTACACCCTGT
GAAAAGGGGTCTTCCACGTTGGAAAGAGGGCGGCCAATTCCATCCCAGGC
TCGGAATCAAATAACCACTTGTCATGTAAAGACTNGGTAGGGCTTNGTCA
GGTCTTGGAAGAAAAAC
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