EY753548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 420.239 bits (1079), Expect = 5.793e-118 Identity = 208/249 (83.53%), Postives = 220/249 (88.35%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNF 817 + MSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRA VY DEVRKW K LVNSKE P+FEQP+MT++KLL Y M+VQ QENVKRVQLA++ +SEA LG+ N +AI+ G F Sbjct: 187 IMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTF 435 HSP 2 Score: 24.2534 bits (51), Expect = 5.793e-118 Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 846 PFPERWTDPY*KNFAPTAK 902 P PE TDP N+ PTA+ Sbjct: 448 PVPEGCTDPQATNYDPTAR 466
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 416.001 bits (1068), Expect = 9.865e-118 Identity = 203/249 (81.53%), Postives = 221/249 (88.76%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNF 817 + MSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRA VYDDEVRKW K LVNS+E P FEQP+MT+EKL+EY M+V+ QENVKRVQLAEQ LSEA LG+ N +A++ G+F Sbjct: 178 IMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSF 426 HSP 2 Score: 27.7202 bits (60), Expect = 9.865e-118 Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 846 PFPERWTDPY*KNFAPTAK 902 P PE TDP KNF PTA+ Sbjct: 438 PVPEGCTDPVAKNFDPTAR 456
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 419.468 bits (1077), Expect = 1.082e-116 Identity = 205/249 (82.33%), Postives = 222/249 (89.16%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNF 817 + MSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRA VYDDEVRKW K LVNSKE PTFEQP+MT++KLL+Y NM+V+ QENVKRVQLA++ +SEA LG+ N++AI+ G F Sbjct: 187 IMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435 HSP 2 Score: 20.7866 bits (42), Expect = 1.082e-116 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1 Query: 52 KMGINPIM 75 KMGINPIM Sbjct: 181 KMGINPIM 188
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 5.038e-116 Identity = 207/249 (83.13%), Postives = 220/249 (88.35%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNF 817 + MSAGELESGNAGEPAKLIRQRYREAADII+KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRA VYDDEVRKW K LVNSKE PTFEQP+MT+EKLLEY NM+VQ QENVKRVQLA++ LSEA LG+ N +A+ G F Sbjct: 187 IMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTF 435
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 2.427e-113 Identity = 196/252 (77.78%), Postives = 221/252 (87.70%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNFMAK 826 + MSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRA VYDDEVRKW K LVNS++ TFEQP+MT+EKLLEY +M+VQ Q+NVKRVQLA+ +S+A LG+ N++A++ G+F K Sbjct: 177 IMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGK 428 HSP 2 Score: 23.0978 bits (48), Expect = 2.427e-113 Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 846 PFPERWTDPY*KNFAPTAK 902 P PE TD KN+ PTA+ Sbjct: 436 PVPEGCTDQNAKNYDPTAR 454
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 402.519 bits (1033), Expect = 3.166e-113 Identity = 201/252 (79.76%), Postives = 212/252 (84.13%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNFMAK 826 + MSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRA VYDDEVRK+ K LVNS+E P FEQP MT EKL+EY NM+V QENVKRVQLAE LS+A LG+ N +AI G F K Sbjct: 187 IMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGK 438 HSP 2 Score: 26.1794 bits (56), Expect = 3.166e-113 Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 846 PFPERWTDPY*KNFAPTAK 902 P PE TDP +NF PTA+ Sbjct: 446 PVPEGCTDPVAENFDPTAR 464
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 407.527 bits (1046), Expect = 4.133e-113 Identity = 202/252 (80.16%), Postives = 220/252 (87.30%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNFMAK 826 + MSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRA VYDDEVRKW K LVNS+E PTF+QP+MT+EKL+EY +M+VQ QENVKRVQLA++ LSEA LG+ N++A++ G F K Sbjct: 175 IMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425 HSP 2 Score: 20.7866 bits (42), Expect = 4.133e-113 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1 Query: 52 KMGINPIM 75 KMGINPIM Sbjct: 169 KMGINPIM 176
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 407.142 bits (1045), Expect = 6.809e-113 Identity = 199/251 (79.28%), Postives = 221/251 (88.05%), Query Frame = 2 Query: 65 TQLCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNF 817 T + MSAGELESGNAGEPAKLIRQRYREA+D+IKKGKM CL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V ++ +V+LVDTFPGQSIDFFGALRA VYDDEVR+W + LVNSKE PTFEQP++T+EKLLEY +M+V QENVKRVQLA++ L+EA LGE NE+A++ G+F Sbjct: 181 TPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSF 431
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 406.757 bits (1044), Expect = 7.036e-113 Identity = 198/249 (79.52%), Postives = 218/249 (87.55%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNF 817 + MSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRA VYDDEVRKW K LVNSKE PTF+QP+M+++KLL+Y NM+VQ QENVKRVQLA++ L+EA LG NE+AI+ G+F Sbjct: 189 IMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSF 437 HSP 2 Score: 20.7866 bits (42), Expect = 7.036e-113 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1 Query: 52 KMGINPIM 75 KMGINPIM Sbjct: 183 KMGINPIM 190
BLAST of EY753548 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.472e-112 Identity = 198/249 (79.52%), Postives = 215/249 (86.35%), Query Frame = 2 Query: 71 LCMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAXVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYRNMIVQNQENVKRVQLAEQLLSEAVLGEPNENAIQDGNF 817 + MSAGELESGNAGEPAKLIRQRYREAA+II+KG +CCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRA VYDDEVRKW L+NS + PTFEQP+MT+EKLLEY NM+VQ QENVKRVQLAE L EA LG+ N +AI GNF Sbjct: 191 IMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439 HSP 2 Score: 20.7866 bits (42), Expect = 3.472e-112 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1 Query: 52 KMGINPIM 75 KMGINPIM Sbjct: 185 KMGINPIM 192 The following BLAST results are available for this feature:
BLAST of EY753548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753548 ID=EY753548; Name=EY753548; organism=Citrus sinensis; type=EST; length=903bpback to top |