EY753504

Overview
NameEY753504
Unique NameEY753504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8225 contig Csv1_Contig8225:895..1480. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH5_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.008e-42
Identity = 84/105 (80.00%), Postives = 97/105 (92.38%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            II  LCAGL+G LGLTPSCNIGE G+ALAEAVHGSAPDIAGKNLANPTALLLS V MLRHL+ +++A++I +AI++TIAEGKYRTADLGGSSTT++FTKAICDHL
Sbjct:  270 IISDLCAGLVGGLGLTPSCNIGEDGVALAEAVHGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH6_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.455e-41
Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            II  LCAGL+G LGLTPS NIGE GIALAEAVHGSAPDIAG NLANPTALLLS V MLRHL+L+ +A++I +AI++TIAEGKYRTADLGGSSTT+DFTKAICDHL
Sbjct:  270 IISDLCAGLVGGLGLTPSMNIGEDGIALAEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQIHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL 374          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_SOLTU (3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.319e-34
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGK 272
            II  LCAGLIG LGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSV+MLRHLELHDKADRIQ+AIL TIA GK
Sbjct:  263 IISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVSMLRHLELHDKADRIQDAILKTIAGGK 344          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.179e-29
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFT 320
            I+  LCAGLIG LGLTPS NIGE G A+ EAVHG+APDIAGKN ANPTAL+LSS+ MLRHL    +A  I+NA+L+T+ EGK +T DLGG+S+ S++T
Sbjct:  244 IVSDLCAGLIGGLGLTPSGNIGENGSAIFEAVHGTAPDIAGKNKANPTALILSSIMMLRHLGHFHEASIIENAVLNTLTEGKVKTGDLGGNSSCSEYT 341          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH3A_BOVIN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos taurus GN=IDH3A PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.179e-29
Identity = 64/102 (62.75%), Postives = 80/102 (78.43%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 332
            I+  LCAGLIG LG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG+S  SDFT+ IC
Sbjct:  258 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIETACFATIKDGKSLTKDLGGNSKCSDFTEEIC 359          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH3A_PONAB (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Pongo abelii GN=IDH3A PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29
Identity = 64/102 (62.75%), Postives = 80/102 (78.43%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 332
            I+  LCAGLIG LG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  258 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH3A_MACFA (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29
Identity = 64/102 (62.75%), Postives = 80/102 (78.43%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 332
            I+  LCAGLIG LG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  239 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 340          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH3A_HUMAN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo sapiens GN=IDH3A PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29
Identity = 64/102 (62.75%), Postives = 80/102 (78.43%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 332
            I+  LCAGLIG LG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A RI+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  258 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH3A_DROME (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=l(1)G0156 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.340e-29
Identity = 66/105 (62.86%), Postives = 80/105 (76.19%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            I+  +CAGL+G LGLTPS N+G  G AL E+VHG+APDIAGK+LANPTALLLS+V MLRH+EL+  AD+I+ A   TI EGKY T DLGG +  S+FT  IC  L
Sbjct:  274 ILSDMCAGLVGGLGLTPSGNMGLNG-ALFESVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYADKIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH3A_MOUSE (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus GN=Idh3a PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.281e-29
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAIC 332
            I+  LCAGLIG LG+TPS NIG  G+A+ E+VHG+APDIAGK++ANPTALLLS+V MLRH+ L D A +I+ A  +TI +GK  T DLGG++  SDFT+ IC
Sbjct:  258 ILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAKIEAACFATIKDGKSLTKDLGGNAKCSDFTEEIC 359          
The following BLAST results are available for this feature:
BLAST of EY753504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
IDH5_ARATH1.008e-4280.00Isocitrate dehydrogenase [NAD] catalytic subunit 5... [more]
IDH6_ARATH1.455e-4180.95Isocitrate dehydrogenase [NAD] catalytic subunit 6... [more]
LEU3_SOLTU1.319e-3491.463-isopropylmalate dehydrogenase, chloroplastic OS=... [more]
IDHA_DICDI2.179e-2965.31Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
IDH3A_BOVIN2.179e-2962.75Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_PONAB3.717e-2962.75Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_MACFA3.717e-2962.75Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_HUMAN3.717e-2962.75Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]
IDH3A_DROME6.340e-2962.86Probable isocitrate dehydrogenase [NAD] subunit al... [more]
IDH3A_MOUSE8.281e-2961.76Isocitrate dehydrogenase [NAD] subunit alpha, mito... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-F03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753504 ID=EY753504; Name=EY753504; organism=Citrus sinensis; type=EST; length=587bp
ATTAACAGCTCGACCCACGCGTCCGCATCATTATTTACCTATGTGCTGGG
TTGATTGGTCCATTGGGCTTAACACCTAGTTGCAATATTGGGGAAGGAGG
AATTGCCCTTGCTGAAGCTGTTCATGGTTCAGCACCTGATATTGCTGGAA
AGAATTTGGCAAATCCAACTGCTTTGCTGTTGAGTTCGGTAACAATGTTG
CGCCATTTGGAGCTCCATGACAAGGCTGATAGGATCCAAAATGCTATCCT
GAGCACAATTGCAGAGGGGAAGTATCGAACTGCAGATCTTGGTGGCTCTT
CAACGACATCAGATTTCACAAAGGCAATCTGCGATCATCTTTAAATATTT
CTTTCTACATAGAATTTGAATTCATGTTCAAGATTTACATTCTACCTTTC
TTTTTTTGAGCAATGTCTCAAATTTGTTTTTTCCCCCCCTTTTTAAAGTG
TTTTTCTTTGAGGGGAATGAGACCCATCACCTTGGTGACTATGTAGAAGT
TTTTTTCTGATGAAACTGTTCAGCCAGAGTGTATATGGCCGTCCTCNGAA
AAAAAAAAANNNTTAAAAAAAAAAAAAAAAAAAANGG
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