EY753503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.327e-59 Identity = 103/134 (76.87%), Postives = 117/134 (87.31%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 +S+ SNG RVQCMKVWPP GLKK+ETLSYLPPLSDEAL KEI+YLIR+ WIPCLEF LE G+VYREHH SP YYDGRYWTMWKLPM GCTD+ QV+KEVGE +KEYP++F+R+IGFDN+R VQC FI A PPG Sbjct: 46 SSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPG 179
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.125e-55 Identity = 99/134 (73.88%), Postives = 113/134 (84.33%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TSIASNG RVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEF LE G+VYRE+H SP YYDGRYWTMWKLPM GCTD++QVLKE+ E +K YP SF+RIIGFDN+R VQC FIA P G Sbjct: 49 TSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.470e-55 Identity = 99/134 (73.88%), Postives = 113/134 (84.33%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TSIASNG RVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEF LE G+VYRE+H SP YYDGRYWTMWKLPM GCTD++QVLKE+ E +K YP SF+RIIGFDN+R VQC FIA P G Sbjct: 49 TSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.772e-54 Identity = 98/134 (73.13%), Postives = 109/134 (81.34%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TSIASNG RVQCM+VWPP G KKFETLSYLP L D L KE+ YL+R GWIPCLEF LE G+VYREH+ SP YYDGRYWTMWKLPM GCTDA+QVLKE+ E + YP+ F+RIIGFDN+R VQC FIA PPG Sbjct: 44 TSIASNGGRVQCMQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_HORVU (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.620e-54 Identity = 98/140 (70.00%), Postives = 116/140 (82.86%), Query Frame = 1 Query: 25 RQQXSTSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPGC 444 R S++ SNG R++CM+VWP G+KKFETLSYLPPLS EALLK+++YLIRS W+PCLEF + G+++REH+ SP YYDGRYWTMWKLPM GCTDATQVL EV EV+KEYP ++VRIIGFDNMR VQC FIA PPGC Sbjct: 30 RSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGC 168
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 4.728e-54 Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TSIASNG RVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YL+ GW+PCLEF E G+VYRE+H SP YYDGRYWTMWKLPM GCTDATQVL E+ E +K YP++++RIIGFDN+R VQC FIA PPG Sbjct: 46 TSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 4.728e-54 Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TSIASNG RVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YL+ GW+PCLEF E G+VYRE+H SP YYDGRYWTMWKLPM GCTDATQVL E+ E +K YP++++RIIGFDN+R VQC FIA PPG Sbjct: 46 TSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.053e-53 Identity = 97/132 (73.48%), Postives = 108/132 (81.82%), Query Frame = 1 Query: 43 SIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438 SIASNG RVQCM+VWP TG KKFETLSYLP L D L KE+ YL+R GWIPCLEF LE G+VYREHH SP YYDGRYWTMWKLPM GCTDA+QVLKE+ E + YP++F+RIIGFDN+R VQC FIA PP Sbjct: 45 SIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.053e-53 Identity = 98/134 (73.13%), Postives = 109/134 (81.34%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TSIASNG RVQCM+VWPP KK+ETLSYLP LS E LL EI YL++SGW+PCLEF E+G+VYREHH SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP ++VRIIGFDN+R VQC FIA P G Sbjct: 46 TSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2_WHEAT (Ribulose bisphosphate carboxylase small chain PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.797e-53 Identity = 97/134 (72.39%), Postives = 113/134 (84.33%), Query Frame = 1 Query: 43 SIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPGC 444 S SNG R++CM+VWP G+KKFETLSYLPPLS EALLK+++YLIRS W+PCLEF + G+V+REH+ SP YYDGRYWTMWKLPM GCTDATQVL EV EV+KEYP ++VR+IGFDNMR VQC FIA PPGC Sbjct: 37 SSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRPPGC 169 The following BLAST results are available for this feature:
BLAST of EY753503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753503 ID=EY753503; Name=EY753503; organism=Citrus sinensis; type=EST; length=820bpback to top |