EY753492

Overview
NameEY753492
Unique NameEY753492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753492 vs. ExPASy Swiss-Prot
Match: ACBP4_ARATH (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.509e-30
Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  198 WMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGESGNGLLDDVQVLNFDRFSWTAAXXXXXXXXXXXXXX--IPACRGHSLISWGKKVLLVGGKTDSGSDRVSVWTFDTXTECWSVVEAKGDIPVARSG 572
            W     +G +P  R+ H AAVI +KM + GG      L D+ VL+   ++W+                  +  C GHSLI+W  K+L +GG T   S+ + V  FD  T  WS+++  G  PV+R G
Sbjct:  171 WTAPQTSGQRPKARYEHGAAVIQDKMYIYGGNHNGRYLGDLHVLDLKSWTWSRVETKVATESQETSTPTLLAPCAGHSLIAWDNKLLSIGGHTKDPSESMQVKVFDPHTITWSMLKTYGKPPVSRGG 297          

HSP 2 Score: 73.1738 bits (178), Expect = 1.509e-30
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  575 TVVRASSVLILFGGEDGKRRKLNDLHMVDLKSLTWLPLHCTRTGPSPRSNHVAALYDDQNLLIFGGSAKSKTLKTCIHLTLKDDL 829
            +V      L++FGG+D KR  LNDLH++DL ++TW  +      PSPRS+H AA++ ++ LLIFGG +         H T  DDL
Sbjct:  299 SVTMVGKTLVIFGGQDAKRSLLNDLHILDLDTMTWDEIDAVGVSPSPRSDHAAAVHAERFLLIFGGGS---------HATCFDDL 374          
BLAST of EY753492 vs. ExPASy Swiss-Prot
Match: ACBP5_ARATH (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=ACBP5 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.013e-28
Identity = 39/127 (30.71%), Postives = 59/127 (46.46%), Query Frame = 3
Query:  198 WMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGESGNGLLDDVQVLNFDRFSWTAAXXXXXXXXXXXXXX--IPACRGHSLISWGKKVLLVGGKTDSGSDRVSVWTFDTXTECWSVVEAKGDIPVARSG 572
            W     +G  P  R+ H AAVI +KM + GG      L D+ VL+   ++W+                  +  C GHSLI W  ++L +GG T   S+ + V  FD     WS+++  G  P++R G
Sbjct:  172 WTAPRTSGQPPKARYQHGAAVIQDKMYMYGGNHNGRYLGDLHVLDLKNWTWSRVETKVVTGSQETSSPAKLTHCAGHSLIPWDNQLLSIGGHTKDPSESMPVMVFDLHCCSWSILKTYGKPPISRGG 298          

HSP 2 Score: 71.2478 bits (173), Expect = 5.013e-28
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 2
Query:  575 TVVRASSVLILFGGEDGKRRKLNDLHMVDLKSLTWLPLHCTRTGPSPRSNHVAALYDDQNLLIFGGSAKSKTLKTCIHLTLKDDL 829
            +V      L++FGG+D KR  LNDLH++DL ++TW  +    + P+PRS+H AA++ ++ LLIFGG +         H T  DDL
Sbjct:  300 SVTLVGKSLVIFGGQDAKRSLLNDLHILDLDTMTWEEIDAVGSPPTPRSDHAAAVHAERYLLIFGGGS---------HATCFDDL 375          
BLAST of EY753492 vs. ExPASy Swiss-Prot
Match: TYW23_ORYSJ (tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica GN=Os07g0515000 PE=2 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 3.572e-12
Identity = 31/83 (37.35%), Postives = 42/83 (50.60%), Query Frame = 2
Query:  572 HTVVRASSVLILFGGEDGKRRKLNDLHMVDLKSLTWLPLHCTRTGPSPRSNHVAALYDDQNLLIFGGSAKSKTLKTCIHLTLK 820
            H++V   S L LFGG DG+R  LND +  D  +L W   +     PSPR +H   +Y D  L I GG    ++ +    L LK
Sbjct:  453 HSLVSYGSKLFLFGGHDGQRA-LNDFYSFDTTTLKWNKENTNGKAPSPRFSHCMFIYKDY-LGILGGCPIRESSQEIALLNLK 533          

HSP 2 Score: 43.8986 bits (102), Expect = 3.572e-12
Identity = 36/121 (29.75%), Postives = 53/121 (43.80%), Query Frame = 3
Query:  207 LSIAGDKPIPRFNHAAAVIGNKMIVVGGESG-NGLLDDVQVLNFDRFSWTAAXXXXXXXXXXXXXXIPACRGHSLISWGKKVLLVGGKTDSGSDRVSVWTFDTXTECWSVVEAKGDIPVAR 566
            L + G  P PR  H   V+GN + VVGG SG + +L+D+ VL      W+                 P  R H+  +  +KV + GG +D G     +   DT +  W+V+      P AR
Sbjct:  340 LKVTGS-PSPRMGHTITVVGNDIYVVGGRSGPSEILNDIWVLERSNNRWSKVDCSGDFFR-------PRHR-HAAAAVDRKVYVFGGLSDDGLCS-CMNIMDTASIQWNVISPDDKWPCAR 450          
The following BLAST results are available for this feature:
BLAST of EY753492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ACBP4_ARATH1.509e-3033.07Acyl-CoA-binding domain-containing protein 4 OS=Ar... [more]
ACBP5_ARATH5.013e-2830.71Acyl-CoA-binding domain-containing protein 5 OS=Ar... [more]
TYW23_ORYSJ3.572e-1237.35tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryz... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753492 ID=EY753492; Name=EY753492; organism=Citrus sinensis; type=EST; length=923bp
CTTGGAAGTATTGAAGAAGGTGCAGCTATCAGATTCTCGCTCAGGCTATT
AGGAGTCCAATAAGGCCACCAAAACGAAATAGTAATCCGAATAGTGAATG
CGTTGCTCCATCGAATAATCATGCTGATGAAAGTGATTGCCAGTGCACAA
TTGCTGGGCCTGAAGTTAGTAATGGCTCATCAGGAAACTCCGAGAATTGG
ATGGTTTTGTCAATTGCTGGGGACAAACCTATTCCTCGATTTAATCATGC
GGCAGCTGTAATTGGGAACAAGATGATAGTGGTAGGCGGCGAGTCTGGAA
ATGGATTGTTGGATGATGTGCAGGTTCTTAATTTTGACAGATTTTCTTGG
ACGGCAGCGTCATCAAAACTTTACTTGTCACCAAGCAGTCTGCCACTAAA
GATCCCTGCATGCAGGGGACATAGTCTGATTTCTTGGGGAAAGAAGGTGC
TCCTAGTTGGAGGAAAAACTGACTCTGGCAGTGACAGGGTTTCAGTTTGG
ACATTTGACACANAGACAGAGTGTTGGTCGGTTGTTGAAGCAAAGGGAGA
TATTCCGGTTGCTCGCAGTGGCACACTGTGGTTAGGGCAAGCTCTGTTTT
AATTTTGTTCGGGGGCGAAGATGGAAAAAGGAGAAAACTAAATGATTTGC
ATATGGTTGATCTAAAGTCTTTGACATGGCTTCCTCTTCACTGCACAAGG
ACTGGGCCATCTCCCAGATCCAACCATGTGGCAGCACTTTATGATGACCA
GAATCTTCTTATATTTGGTGGATCGGCAAAATCTAAGACATTGAAGACTT
GTATTCACTTGACTTTGAAAGATGATTTGGACTAAAATAAATATCGGAGT
TTCCTCCCGTTCCCAAACTGGTGCTGGGGTGTTCTTTGGGAACCAATGTT
TATAGCAGAGGGGAAGCGGAAAA
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