EY753481

Overview
NameEY753481
Unique NameEY753481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753481_ssr79 microsatellite EY753481_ssr79:79..90. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:1..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: UMPK_ARATH (Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 7.718e-86
Identity = 154/174 (88.51%), Postives = 167/174 (95.98%), Query Frame = 3
Query:  207 KKPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KKPTV+FVLGGPGSGKGTQCA IVEH+GYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKA++E+GNDKFLIDGFPRNEENRAAFE VT+IEP+FVLFFDC EEEME+R+L RNQGREDDN+ETIRKRFKVFLESSLPV+ YYEAKGKVRKI+AAKP+  V
Sbjct:   12 KKPTVIFVLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAV 185          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KAD_PRUAR (Adenylate kinase OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.764e-59
Identity = 114/188 (60.64%), Postives = 142/188 (75.53%), Query Frame = 3
Query:  168 ETPVKEADASVTVK-KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            ET   E++     K  P V FVLGGPGSGKGTQCA IVE FG+TH+SAGDLLR EI SGS  G++I + I+EGKIVPS+VT++L+QK ME S N KFLIDGFPR+EENR AFE     EP+ VLFFDC E+EM +R+LNRNQGR DDN++TI+KR ++F E + PV+ YY  +GK+ KI+A   V E+
Sbjct:   31 ETFTSESEIPTPSKGSPFVTFVLGGPGSGKGTQCAKIVEAFGFTHVSAGDLLRREIASGSAYGSVILSTIREGKIVPSQVTVELIQKEMESSDNYKFLIDGFPRSEENRKAFEQTIGAEPDVVLFFDCPEQEMVKRVLNRNQGRVDDNIDTIKKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEI 218          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KCY_DICDI (Cytidylate kinase OS=Dictyostelium discoideum GN=pyrK PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 4.891e-48
Identity = 100/177 (56.50%), Postives = 127/177 (71.75%), Query Frame = 3
Query:  210 KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK--IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KP VVFVLGGPGSGKGTQCANIV  FG+ HLSAGDLLR E +SGS++G MI  MIK G+IVPS VT+KLL+ A++ +    FL+DGFPRNEEN  ++E   K  ++ +FVLFFDC EE M +R+L R +  GR DDN+E+I+KRF  F   +  V+ +Y    KV+ I A + V EV
Sbjct:    6 KPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEV 182          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KCY_CHICK (UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.858e-47
Identity = 102/183 (55.74%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  210 KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIK-SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KP VVFVLGGPG+GKGTQCA IVE +GYTHLSAGDLLR E K  GS+ G +I+N IKEG+IVP E+TI LL++AM++     S  +KFLIDGFPRNE+N   +      K +  FVLFFDC  E    R L R  + GR DDN E++ KR   +L+S+ P++  YE  GKVR++DA+K V EV
Sbjct:    2 KPVVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGDLLRDERKRPGSQYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDNLQGWNKTMDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNRESLEKRIHTYLQSTRPIIDLYERMGKVRRVDASKSVDEV 184          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KCY_XENLA (UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 2.427e-47
Identity = 100/183 (54.64%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  210 KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAME-----ESGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KP VVFVLGGPG+GKGTQC  IV+ +GYTHLSAGDLLR E K   S+ G +I++ I++GKIVP E+TI LLQ+AME     ++   KFLIDGFPRNE+N   +E     K +  FVLFFDC  E    R L R  + GR DDN E++ KR + +L+S+ P++  YE +GKVRK+DA+K V EV
Sbjct:    2 KPLVVFVLGGPGAGKGTQCERIVQKYGYTHLSAGDLLRDERKKPDSQYGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKRGKVRKVDASKSVDEV 184          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KCY_XENTR (UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.684e-46
Identity = 100/183 (54.64%), Postives = 129/183 (70.49%), Query Frame = 3
Query:  210 KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES----GN-DKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KP VVFVLGGPG+GKGTQC  IV+ +GYTHLSAGDLLR E K   S+ G +I++ I++G+IVP E+TI LLQ+AME++    GN  KFLIDGFPRNE+N   +E     K +  FVLFFDC  E    R L R  + GR DDN E++ KR + +L+S+ P++  YE  GKV+K+DA+K V EV
Sbjct:    2 KPFVVFVLGGPGAGKGTQCERIVQKYGYTHLSAGDLLRDERKKPDSQYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEV 184          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KCY_DANRE (UMP-CMP kinase OS=Danio rerio GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 5.978e-46
Identity = 100/183 (54.64%), Postives = 132/183 (72.13%), Query Frame = 3
Query:  210 KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAE-IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-----GNDKFLIDGFPRNEENRAAF--EAVTKIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KP VVFVLGGPG+GKGTQCA IVE++ YTHLSAGDLLR E  ++ SE G +I + IKEGKIVP ++TI LL+KAMEE+        +FLIDGFPRN++N   +  E   K + +FVLFFDCS E    R L R  + GR DDN E++ KR + +L+S+ P+++ YE +GKV++IDA++ V EV
Sbjct:    2 KPQVVFVLGGPGAGKGTQCARIVENYSYTHLSAGDLLREERSRTDSEFGQLIDSYIKEGKIVPVQITINLLRKAMEETMKADEKKFRFLIDGFPRNQDNLQGWNTEMDGKADVKFVLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPIIELYEKQGKVQRIDASRSVDEV 184          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KCY_MOUSE (UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.808e-46
Identity = 99/183 (54.10%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  210 KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KP VVFVLGGPG+GKGTQCA IVE +GYTHLSAG+LLR E K+  S+ G +I+  IKEGKIVP E+TI LL++ M++     +  +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R  + GR DDN E++ KR + +LES+ P++  YE  GKV+KIDA+K V EV
Sbjct:    2 KPLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLESTKPIIDLYEEMGKVKKIDASKSVDEV 184          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KCY_RAT (UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.332e-45
Identity = 99/183 (54.10%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  210 KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KP VVFVLGGPG+GKGTQCA IVE +GYTHLSAG+LLR E K+  S+ G +I+  IKEGKIVP E+TI LL++ M++     +  +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R  + GR DDN E++ KR + +LES+ P++  YE  GKV+KIDA+K V EV
Sbjct:    2 KPLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIDRCLERGKSSGRSDDNRESLEKRIQTYLESTKPIIDLYEEMGKVKKIDASKSVDEV 184          
BLAST of EY753481 vs. ExPASy Swiss-Prot
Match: KCY_HUMAN (UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 1.739e-45
Identity = 98/183 (53.55%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  210 KPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKS-GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 728
            KP VVFVLGGPG+GKGTQCA IVE +GYTHLSAG+LLR E K+  S+ G +I+  IKEGKIVP E+TI LL++ M++     +  +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R  + GR DDN E++ KR + +L+S+ P++  YE  GKV+KIDA+K V EV
Sbjct:    2 KPLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEV 184          
The following BLAST results are available for this feature:
BLAST of EY753481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
UMPK_ARATH7.718e-8688.51Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 P... [more]
KAD_PRUAR2.764e-5960.64Adenylate kinase OS=Prunus armeniaca PE=2 SV=1[more]
KCY_DICDI4.891e-4856.50Cytidylate kinase OS=Dictyostelium discoideum GN=p... [more]
KCY_CHICK1.858e-4755.74UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1[more]
KCY_XENLA2.427e-4754.64UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=... [more]
KCY_XENTR2.684e-4654.64UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2... [more]
KCY_DANRE5.978e-4654.64UMP-CMP kinase OS=Danio rerio GN=cmpk1 PE=2 SV=2[more]
KCY_MOUSE7.808e-4654.10UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1 SV=1[more]
KCY_RAT1.332e-4554.10UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 PE=1 ... [more]
KCY_HUMAN1.739e-4553.55UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753481 ID=EY753481; Name=EY753481; organism=Citrus sinensis; type=EST; length=956bp
CGGNATTCCAAAGCCGACCCACGCGTCCGAACATTGGCTTTGGCATCCCT
CTGCCTTCTTTCTCCCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAAC
AACGCTCGCAATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGC
TGATGGGAACTGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTTCCGTA
ACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGG
AAAAGGAACCCAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATC
TCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAAT
GGAACCATGATTCAGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGA
GGTCACAATTAAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATA
AATTTCTCATCGATGGTTTTCCCAGGAACGAGGAAAATCGTGCTGCATTT
GAAGCTGTTACCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTC
TGAGGAGGAGATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAG
ATGATAACGTTGAGACAATTAGGAAGCGGTTTAAGGTTTTCTTAGAATCT
AGTCTCCCTGTGGTTCAATATTATGAAGCTAAGGGTAAAGTTCGGAAGAT
TGATGCTGCAAAGCCTGTTGCAGAGGTTTGATGCTGTTAAAGCTGNTTTT
ACCCCAAAAGATGAGAAGGCTGCTGNCTANGTCTTCTCTGTCCAGAGTAT
CAGATTTATATCAAGGTGGTGGTATTGNTGTTGGCTGCTGCCTATTGTTG
TACTTTATATTATGAGGTATTATGTCACATGTTTTACTAGATGTCATAAA
AGTCATAGGGNTCATGATATTAATCCTGGTTGCCTAGNATCCTGGTATTG
AAACGA
back to top