EY753476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 5.665e-79 Identity = 131/179 (73.18%), Postives = 147/179 (82.12%), Query Frame = 3 Query: 141 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNTPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEFFPDPTTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGVGVPRG 677 QK+ S+ GATKASF A G+RSV+VSA AADP+ PLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE+L+WN Q+E+VH RWAMLGAAGIFIPE LTK+G+LNTPSWYTAGE E+F D TTLF++E + IGWAEG+RWA IIKPGCVNTDPI PNNKLTG VG P G Sbjct: 21 QKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGG 199 HSP 2 Score: 30.8018 bits (68), Expect = 5.665e-79 Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 2 Query: 725 EVKDLRTKGHQKGKWAXLAWVGAWF 799 ++K+LRTK + G+ A LA +GAWF Sbjct: 214 KIKELRTKEIKNGRLAMLAVMGAWF 238
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 2.137e-75 Identity = 127/179 (70.95%), Postives = 140/179 (78.21%), Query Frame = 3 Query: 141 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNTPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEFFPDPTTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGVGVPRG 677 +++ S+ G TKASF T RS + AADP+ PLWFPGSTPP WLDGSLPGDFGFDPLGL SDPE+LRWN Q+E+VHCRWAMLGAAGIFIPELLTK+GILNTPSWYTAGE E+F D TTLFIVE + IGWAEG+RWA IIKPGCVNTDPI PNNKLTG VG P G Sbjct: 21 RRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGG 199 HSP 2 Score: 30.8018 bits (68), Expect = 2.137e-75 Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 2 Query: 725 EVKDLRTKGHQKGKWAXLAWVGAWF 799 ++K+LRTK + G+ A LA +GAWF Sbjct: 214 KIKELRTKEIKNGRLAMLAVMGAWF 238
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.791e-36 Identity = 71/134 (52.99%), Postives = 87/134 (64.93%), Query Frame = 3 Query: 282 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEFFPDPTTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGVGVPRGCF 683 W PG P +L GSLPGD GFDPLGL DPE LRW VQ+E+V+ RWAMLG AG+ +PE+ T +GI+N P WY AG+ E+F +TLF++E I + E +RW I PG VN DPI L VG P G F Sbjct: 56 WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIF 189
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.991e-36 Identity = 74/155 (47.74%), Postives = 96/155 (61.94%), Query Frame = 3 Query: 219 ATAGTRSVSVSAAAADPNTPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEFFPDPTTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGVGVPRGCF 683 ++A T S V A + W PG P++L GSL GD GFDPLGL DPE L+W VQ+E+V+ RWAMLG AG+ +PE+ TK+GI+N P WY AG+ ++F +TLF++E I + E +RW I PG VN DPI L VG P G F Sbjct: 41 SSAKTSSFKVEAKKGE-----WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIF 190
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.852e-27 Identity = 67/151 (44.37%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 234 RSVSVSAAAADPNTPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWY-TAGELEFFPDPTTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGVGVPRGCF 683 R V+V A + W PG P +LDGSL GD GFDPL L DPE LRW VQ+++V+ RWAMLG AG+ IPE+LTK G++N P W G+ +F +T V + + E +RW I PG VN DPI + L G P F Sbjct: 26 RDVAVQAKGS------WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVF 169
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.736e-21 Identity = 60/159 (37.74%), Postives = 78/159 (49.06%), Query Frame = 3 Query: 156 VAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNTPLWFPGST------PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEFFPDP---TTLFIVEKIFIGWAEGKRWAVIIKP 605 ++G K+S + +R + V AAAA P W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAML GIF+ + T + W+ AG P TL + + +GW E KRW P Sbjct: 19 LSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKS-WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGI------PWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDP 170
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.394e-19 Identity = 65/168 (38.69%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 231 TRSVSVSAAAADP------NTPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGELEFFPDPTTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGVGVP 671 +R V AAA P + PLWF +LDGSLPGD+GFDPLGL SDPE RW E+++ R+AMLGA G PE L K+G++ +W+ AG ++ D TLF++E +G+AE +R+ KPG + L K G G G P Sbjct: 35 SRKGLVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFG-GSGNP 200
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.789e-19 Identity = 57/154 (37.01%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 225 AGTRSVSVSAAAADPNTPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEFFPDP--------TTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNK 644 A + +V AAAA + W P PEWLDGSLPGD+GFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ AG DP TL + I +GW E KRW P + + P +K Sbjct: 39 ATPKRFTVLAAAAKKS---WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAG-----ADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSK 178
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.561e-19 Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 234 RSVSVSAAAADPNTPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGELEFFPDPTTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGVGVP 671 R+ S N LWF +LDG LPGDFGFDPLGL SDPE +W E+++ R+AMLGAAG PE+L K G++ +W+ AG ++ D TLF++E +G+AE +R+ KPG + L K G G G P Sbjct: 40 RAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLG-GSGDP 198
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.200e-18 Identity = 52/128 (40.62%), Postives = 67/128 (52.34%), Query Frame = 3 Query: 246 VSAAAADPNTPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEFFPDP--------TTLFIVEKIFIGWAEGKRW 587 V+AAA P W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ AG DP +L + + +GW E KRW Sbjct: 44 VAAAAVAPKKS-WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAG-----ADPGAIAPFSFGSLLGTQLLLMGWVESKRW 159 The following BLAST results are available for this feature:
BLAST of EY753476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753476 ID=EY753476; Name=EY753476; organism=Citrus sinensis; type=EST; length=909bpback to top |