EY753472

Overview
NameEY753472
Unique NameEY753472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13106 contig Csv1_Contig13106:6..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: Y2287_ARATH (GTP-binding protein At2g22870 OS=Arabidopsis thaliana GN=EMB2001 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 3.759e-52
Identity = 97/170 (57.06%), Postives = 123/170 (72.35%), Query Frame = 3
Query:  327 LFVPPETEVSIDDSSLSTRILKGSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            LF+PP  E+   +      +L GSNIV+  +A  +Q+ + EFVKSS R  DCP D  PE A++GRSNVGKSSL+N LVR+K++ALTSK P KTQ INHF +N SWY+VDLPGYG+A      +TDW  FTK YFLNR +LV V LLIDAS+P + IDL+ A+WLG+N +P
Sbjct:   67 LFIPPGVEI---EELTDDMVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDSLVCVLLLIDASVPPQKIDLDCANWLGRNNVP 233          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_BACV8 (Probable GTP-binding protein engB OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=engB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.695e-36
Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEFV S+ + E CP D LPE+A +GRSNVGKSSL+N L +R KLA+TS TP KT  INHF IN  WYLVDLPGYGYA+  ++      +  +DY L R  + ++F+LID  +  + IDLE+  WLG+N +P
Sbjct:    2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLAKRPKLAMTSSTPGKTLLINHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQKIDLEFMEWLGENGVP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_GRAFK (Probable GTP-binding protein engB OS=Gramella forsetii (strain KT0803) GN=engB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.587e-34
Identity = 68/135 (50.37%), Postives = 92/135 (68.15%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEFV S+ + + CP+  LPE+A +GRSNVGKSSL+N L  RK LA TS  P KTQ INHF IN++W+LVDLPGYGYA   +  +  + KF   YF  R  ++  F+LID+    +PID+E+  WLG++ IP
Sbjct:    2 KIKTAEFVISNSKVDHCPNSTLPEYAFIGRSNVGKSSLINMLTGRKSLAKTSAKPGKTQLINHFLINNNWHLVDLPGYGYAQVSKSTKKVFQKFITAYFKKREQMICAFVLIDSRHKPQPIDMEFMQWLGEHNIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_FLAJ1 (Probable GTP-binding protein engB OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=engB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.587e-34
Identity = 68/135 (50.37%), Postives = 95/135 (70.37%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEF+ S+     CP D LPE+A +GRSNVGKSSL+N +   K LA TS  P KTQ INHF+IN++W+LVDLPGYGYA   ++ ++ + +F  DYF NR  LV  F+LID    A+ ID+E+ S++G+++IP
Sbjct:    2 KINTAEFIVSNSDAAKCPKDFLPEYAFIGRSNVGKSSLINMITNHKNLAKTSGKPGKTQLINHFKINNNWFLVDLPGYGYAKVSKKTKSIFQQFITDYFENREQLVCAFVLIDIRHEAQKIDIEFMSYMGESEIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_BACTN (Probable GTP-binding protein engB OS=Bacteroides thetaiotaomicron GN=engB PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.534e-34
Identity = 69/135 (51.11%), Postives = 91/135 (67.41%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEFV S+   + CP+   PE+A +GRSNVGKSSL+N L  RK LA+TS TP KT  INHF IN SWYLVDLPGYGYA   ++ +       +DY L R  + ++F+LID+ +  + IDLE+  WLG+N IP
Sbjct:    2 EITSAEFVISNTDVKKCPTGVFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINHFLINQSWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGENGIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_BACFR (Probable GTP-binding protein engB OS=Bacteroides fragilis GN=engB PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.534e-34
Identity = 69/135 (51.11%), Postives = 92/135 (68.15%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEFV S+   + CP+   PE+A +GRSNVGKSSL+N L  RK LA+TS TP KT  INHF IN+SWYLVDLPGYGYA   ++ +       +DY L R  + ++F+LID+ +  + IDLE+  WLG+N IP
Sbjct:    2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLINNSWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGENGIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_BACFN (Probable GTP-binding protein engB OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=engB PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.534e-34
Identity = 69/135 (51.11%), Postives = 92/135 (68.15%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEFV S+   + CP+   PE+A +GRSNVGKSSL+N L  RK LA+TS TP KT  INHF IN+SWYLVDLPGYGYA   ++ +       +DY L R  + ++F+LID+ +  + IDLE+  WLG+N IP
Sbjct:    2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLINNSWYLVDLPGYGYARRGQKGQKQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGENGIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_PARD8 (Probable GTP-binding protein engB OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=engB PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.992e-33
Identity = 66/135 (48.89%), Postives = 91/135 (67.41%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEFV S+     CP    PE+A +GRSNVGKSSL+N L  +K LA+TS+TP KT  INHF IN+ WYLVDLPGYG+A   +E R    +  ++Y L+R  L ++F+L+D    A+ IDLE+  WLG++ +P
Sbjct:    2 EIKSAEFVISNTDVRKCPEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLLINHFLINNEWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLDCRHEAQKIDLEFMEWLGESGVP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_PORGI (Probable GTP-binding protein engB OS=Porphyromonas gingivalis GN=engB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.939e-32
Identity = 70/135 (51.85%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++ +A FV S+     CP   LPE+A +GRSNVGKSSL+N L  +K LA+TS+ P KTQ INHF I+DSWYLVDLPGYGYA      R    +  + Y L R  L S+F+LID     + IDLE+  WLG+N IP
Sbjct:    2 EIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQLINHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQKIDLEFLQWLGENGIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_PORG3 (Probable GTP-binding protein engB OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=engB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.939e-32
Identity = 70/135 (51.85%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++ +A FV S+     CP   LPE+A +GRSNVGKSSL+N L  +K LA+TS+ P KTQ INHF I+DSWYLVDLPGYGYA      R    +  + Y L R  L S+F+LID     + IDLE+  WLG+N IP
Sbjct:    2 EIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQLINHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQKIDLEFLQWLGENGIP 136          
The following BLAST results are available for this feature:
BLAST of EY753472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2287_ARATH3.759e-5257.06GTP-binding protein At2g22870 OS=Arabidopsis thali... [more]
ENGB_BACV81.695e-3651.85Probable GTP-binding protein engB OS=Bacteroides v... [more]
ENGB_GRAFK1.587e-3450.37Probable GTP-binding protein engB OS=Gramella fors... [more]
ENGB_FLAJ11.587e-3450.37Probable GTP-binding protein engB OS=Flavobacteriu... [more]
ENGB_BACTN3.534e-3451.11Probable GTP-binding protein engB OS=Bacteroides t... [more]
ENGB_BACFR3.534e-3451.11Probable GTP-binding protein engB OS=Bacteroides f... [more]
ENGB_BACFN3.534e-3451.11Probable GTP-binding protein engB OS=Bacteroides f... [more]
ENGB_PARD82.992e-3348.89Probable GTP-binding protein engB OS=Parabacteroid... [more]
ENGB_PORGI1.939e-3251.85Probable GTP-binding protein engB OS=Porphyromonas... [more]
ENGB_PORG31.939e-3251.85Probable GTP-binding protein engB OS=Porphyromonas... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-B12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753472 ID=EY753472; Name=EY753472; organism=Citrus sinensis; type=EST; length=879bp
ATTCCAAGACCGACCCACGCGTCCGAAAATAATCTTGTCTTTCCCCATTC
GTCACAGCACCGCAGCAGCGAAGACATGGCCACTCAAAATCTCTTGTAAT
CGAAAACCGCACACACAGAAAAATGCTTTTTTCTCAGCTTCCAAGACTCA
ACTTTTCAATATTCGTAAAGCCACCCCTGTCTCTCCGCTCACACTTCACC
CTCTTACCAAAACACAGGCTCAACTTCTCAGCGCTCAAATCCACACTCTC
CACAACCGAACCGATACCCATATCCCACGCGGTAGAACCAGAACCAGAAC
CCCACGTGGCAATATCACTCGAAAAGCTATTTGTCCCGCCGGAAACAGAG
GTCTCAATCGATGATTCGTCGTTGAGTACGAGAATATTGAAGGGTTCGAA
CATAGTGTTGAGTAAGTACGCAAGGGATGCTCAAGTTGCACAAGCTGAGT
TCGTGAAGAGTAGTGTTAGGACTGAGGATTGCCCCTCTGATGGGTTGCCT
GAATTTGCGCTGGTGGGCAGGTCTAATGTTGGCAAATCTTCGCTTCTTAA
TTCACTTGTTAGAAGGAAGAAGCTTGCTCTCACATCTAAGACACCTGNGA
AAACACAATGCATCAATCATTTTCGGATAAATGATAGTTGGTACTTGGTG
GATTTGCCTGGATATGGGTATGCAGCTGCTCCTCGGGAACTTCGAACCGA
CTGGGACAAATTCACTAAAGACTATTTCCTTAATCGCTCAACTTTGGTCT
CAGTGTTCCTTCTCATAGATGCTAGCATTCCTGCAAAACCTATTGATCTT
GAATATGCTAGTTGGCTGGGACAGAATCAGATTCCATGACATTAGTCTTC
ACCAATGCGACAAGCGGAAGAAGAAAAGA
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