EY753471

Overview
NameEY753471
Unique NameEY753471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig986 contig Csv1_Contig986:12..655. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY753471 vs. ExPASy Swiss-Prot
Match: QCR7_SOLTU (Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.901e-45
Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 3 
Query:   63 FSQSLLDPKKNWLAAQHMKTISKRLRNFGLRXXXXXXXXXXXXIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQAMQTPFRNYLQDMLALVKREKAEREALGALPLYQRTIP 419
            FS+ L+DPKKN LAA HMKT+S RLRN+GLR            +KEAL+RLPREIVDARNQRL RAMDLSMKH+YLPEDLQAMQTPFRNYLQ+MLALVKRE AEREALGALPLYQRT+P
Sbjct:    5 FSRWLVDPKKNPLAAIHMKTLSSRLRNYGLRHDDLYDPMYDLDVKEALNRLPREIVDARNQRLLRAMDLSMKHQYLPEDLQAMQTPFRNYLQEMLALVKRESAEREALGALPLYQRTLP 123
The following BLAST results are available for this feature:
BLAST of EY753471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QCR7_SOLTU5.901e-4577.31Cytochrome b-c1 complex subunit 7 OS=Solanum tuber... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-B11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753471 ID=EY753471; Name=EY753471; organism=Citrus sinensis; type=EST; length=647bp
TCCGGNATTCCCAGGCCGACCCCGCGTCCGGAGCGAGCGATTTCNAAGTA
AAATGGCGTCTCTTTTCGCAGTCGCTATTAGATCCAAAGAAGAACTGGTT
AGCAGCCCAGCACATGAAAACGATCTCTAAACGTCTCCGTAATTTCGGGC
TCCGCTACGACGATCTGTACGATCCCTACTACGATTTGGACATCAAGGAA
GCGCTCGATCGGTTGCCACGTGAGATCGTTGACGCCCGTAACCAGCGTCT
CAAGCGCGCCATGGACCTCTCCATGAAGCACGAGTACCTCCCTGAAGATC
TTCAGGCTATGCAAACACCGTTTAGAAACTACCTACAAGATATGCTGGCC
CTTGTGAAAAGGGAGAAGGCAGAACGTGAAGCATTGGGAGCTTTGCCTCT
CTACCAACGCACTATTCCATAAGCCATCTTAGTGTGTTATGTAGCCAGTG
CTGAACTGAGTGAATCTGTCAATTGATGCAGACTGCTTTTGGAGCTGGTT
TTTTTTTTTTTTTTTGTCATTTGTGTTAGTATGTCAATGCTGTTTCTACT
TGGTTGTCATTTTACTGGCCATTTCGCAATAAATACAGACGACCAAACTT
AAAATTTCAANNNNNAAAAANNNANNNNAAAAAAAAAAAAAAAAAAA
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