EY753456

Overview
NameEY753456
Unique NameEY753456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5955 contig Csv1_Contig5955:230..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753456 vs. ExPASy Swiss-Prot
Match: VATG_CITLI (V-type proton ATPase subunit G OS=Citrus limon GN=VATG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.757e-31
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 1
Query:  229 QVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 405
            QVEREFQRKLAES GDSGANVKRLEQETEVKIHHL AGAEKIQYDVVQM LKHVTTVKN
Sbjct:   52 QVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110          

HSP 2 Score: 46.2098 bits (108), Expect = 1.757e-31
Identity = 24/38 (63.16%), Postives = 25/38 (65.79%), Query Frame = 3
Query:   75 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLRQA 188
            M SNRG GGI           HIVAAARNAKMARL+QA
Sbjct:    1 MTSNRGQGGIQQLLAAEQEAQHIVAAARNAKMARLKQA 38          
BLAST of EY753456 vs. ExPASy Swiss-Prot
Match: VAGT1_ARATH (V-type proton ATPase subunit G1 OS=Arabidopsis thaliana GN=VHA-G1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.592e-21
Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 1
Query:  229 QVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 405
            Q E++FQRKL E+SGDSGANVKRLEQET+ KI  L   A +I  DVV+MLLKHVTTVKN
Sbjct:   52 QTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110          

HSP 2 Score: 38.891 bits (89), Expect = 3.592e-21
Identity = 21/38 (55.26%), Postives = 22/38 (57.89%), Query Frame = 3
Query:   75 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLRQA 188
            M SNRG G I           HIV AAR AKMARL+QA
Sbjct:    1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQA 38          
BLAST of EY753456 vs. ExPASy Swiss-Prot
Match: VATG1_TOBAC (V-type proton ATPase subunit G 1 OS=Nicotiana tabacum GN=VATG1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.994e-20
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 1
Query:  232 VEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 405
            +E EFQRKL ++SGDSGANVKRLEQET+ KI HL   AE++  DVVQMLL+HVTTVKN
Sbjct:   53 MEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110          

HSP 2 Score: 32.3426 bits (72), Expect = 4.994e-20
Identity = 18/38 (47.37%), Postives = 20/38 (52.63%), Query Frame = 3
Query:   75 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLRQA 188
            MAS+ G  GI           HIV  AR AK ARL+QA
Sbjct:    1 MASSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQA 38          
BLAST of EY753456 vs. ExPASy Swiss-Prot
Match: VATG2_TOBAC (V-type proton ATPase subunit G 2 OS=Nicotiana tabacum GN=VATG2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.113e-17
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  232 VEREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 405
            +E EFQR + ++SGDSGANVKRLEQET  KI HL   AE I +DVVQMLL+ VTTVKN
Sbjct:   54 MEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111          

HSP 2 Score: 30.0314 bits (66), Expect = 2.113e-17
Identity = 18/39 (46.15%), Postives = 20/39 (51.28%), Query Frame = 3
Query:   75 MASNRG-HGGIXXXXXXXXXXXHIVAAARNAKMARLRQA 188
            M SNRG   GI           HIV AAR  K AR++QA
Sbjct:    1 MESNRGSQNGIQLLLGAEQEAQHIVNAARTGKQARMKQA 39          
BLAST of EY753456 vs. ExPASy Swiss-Prot
Match: VATG2_ARATH (V-type proton ATPase subunit G2 OS=Arabidopsis thaliana GN=VHA-G2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.219e-13
Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 1
Query:  235 EREFQRKLAESSGDSGANVKRLEQETEVKIHHLNAGAEKIQYDVVQMLLKHVTTVKN 405
            E+ FQRKL  +SGDSGANVKRLEQET+ KI  L   A +I  DVV MLLK+VTTV N
Sbjct:   50 EQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106          

HSP 2 Score: 25.0238 bits (53), Expect = 1.219e-13
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  141 IVAAARNAKMARLRQA 188
            IV AAR AKM RL+QA
Sbjct:   19 IVNAARTAKMTRLKQA 34          
The following BLAST results are available for this feature:
BLAST of EY753456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
VATG_CITLI1.757e-3194.92V-type proton ATPase subunit G OS=Citrus limon GN=... [more]
VAGT1_ARATH3.592e-2171.19V-type proton ATPase subunit G1 OS=Arabidopsis tha... [more]
VATG1_TOBAC4.994e-2072.41V-type proton ATPase subunit G 1 OS=Nicotiana taba... [more]
VATG2_TOBAC2.113e-1768.97V-type proton ATPase subunit G 2 OS=Nicotiana taba... [more]
VATG2_ARATH1.219e-1366.67V-type proton ATPase subunit G2 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-A05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753456 ID=EY753456; Name=EY753456; organism=Citrus sinensis; type=EST; length=613bp
ATTAAACGCTCGACCCACGCGTCCGCCCCGCTTTTCACTGAATCTTGGCC
GCAAGCAAGCCTCAACAGGAAAGCATGGCATCTAATAGGGGTCATGGTGG
AATTCAGCAATTGCTGGCTGCTGAACAAGAAGCTCAACACATTGTTGCTG
CTGCCAGAAATGCAAAAATGGCTAGACTGAGGCAAGCCAATATAAGAGGC
TGAAAGGGAGATTGCTGAACATCGAGCTCAGGTGGAGCGTGAGTTCCAGA
GGAAACTTGCAGAGAGTAGTGGAGATTCAGGTGCGAATGTGAAGAGGCTT
GAACAAGAAACAGAGGTAAAAATTCATCATCTTAATGCTGGGGCTGAGAA
AATTCAATATGATGTTGTCCAAATGCTCCTGAAGCATGTTACAACTGTGA
AGAATTAAGCTCTGATGTTATCTTTTCCTGGTTCGTTGTGAATCCTAGAC
TTCATGTGAGTTGTAATTAGGATCCATGCATTGGTTGTTTCATCGTTTGG
TTTATTTTGGATTGTAATTTATCAAAGTTGGAAATGAGTTCGTTGTACTT
CAAATTCTGCTCATTGTTAGAATAAATAACCATAAACGTATCAAAAAAAA
AAAAAAAAAAAAA
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